BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0596.0009.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00060082.1| COG0524: Sugar kinases, ribokinase family [Cl... 227 3e-58 ref|NP_915138.1| putative fructokinase I [Oryza sativa (japonica... 218 2e-55 gb|AAP42805.1| fructokinase 1 [Zea mays] 218 2e-55 gb|AAQ10000.1| putative fructokinase 2; S2 self-incompatibility ... 214 2e-54 gb|AAQ09999.1| putative fructokinase 2; S1 self-incompatibility ... 214 2e-54 >ref|ZP_00060082.1| COG0524: Sugar kinases, ribokinase family [Clostridium thermocellum ATCC 27405] Length = 323 Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 122/249 (48%), Positives = 161/249 (64%), Gaps = 3/249 (1%) Query: 25 MVDITAIGEVLIDFTPAGLSEKGEQLFECNPGGAPANVVVVLAKLGKSTAFIGKVGEDQF 84 M D+ A+GE+LIDF PAG +E G LF NPGGAPANV+ +L+KLG TAFIGKVG+D F Sbjct: 1 MFDVVAVGELLIDFLPAGTNENGMPLFSSNPGGAPANVLAMLSKLGAKTAFIGKVGKDGF 60 Query: 85 GEYLTRILLENGVNTKGLVKESRAKTTLAFVHLKEDGDRSFSFYRNPGADMLLGMDDIDL 144 G++L L G++T L+ S TTLAFVHL E GDRSFSFYR AD+ L ++D Sbjct: 61 GQFLKATLDNAGIDTSNLLMSSSEMTTLAFVHLNEKGDRSFSFYRKHCADVSLDAGELDK 120 Query: 145 EQIKGTKIFHFGSVSMTHEPSASATLKACIHAKENGALISFDPNLRPALWQDLEQAKIRI 204 + ++ HFG+VS+T EPS +ATL+A AKE GA+IS+DPN RPALW + +A+ + Sbjct: 121 DLLRTCHFLHFGAVSLTDEPSRTATLEAARIAKEAGAIISYDPNYRPALWSNEHEARKYM 180 Query: 205 KEGLALADIVKISEEELEFITGLTDLEEGTRQIQTQFKVKVVLVTKAEKGCFVRFGPGSK 264 + + AD+VK+SEEEL + D +G ++ VV VT EKG +V GS Sbjct: 181 LKAVEYADLVKVSEEELWLLAESEDFSKGAHKL-LAMGPSVVFVTCGEKGSYVF--TGSC 237 Query: 265 WADVPGYKV 273 A+ GY V Sbjct: 238 KANHCGYDV 246 >ref|NP_915138.1| putative fructokinase I [Oryza sativa (japonica cultivar-group)] gb|AAL26574.1| putative fructokinase I [Oryza sativa] dbj|BAB90210.1| putative fructokinase I [Oryza sativa (japonica cultivar-group)] dbj|BAC06252.1| putative fructokinase I [Oryza sativa (japonica cultivar-group)] Length = 323 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 118/250 (47%), Positives = 164/250 (65%), Gaps = 8/250 (3%) Query: 28 ITAIGEVLIDFTP--AGLSEKGEQLFECNPGGAPANVVVVLAKLGKSTAFIGKVGEDQFG 85 + + GE+LIDF P AG+S F PGGAPANV + +A+LG AF+GK+G+D+FG Sbjct: 8 VVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEFG 67 Query: 86 EYLTRILLENGVNTKGLVKESRAKTTLAFVHLKEDGDRSFSFYRNPGADMLLGMDDIDLE 145 L IL +NGV+ G+V ++ A+T LAFV L+ DG+R F FYRNP ADMLL ++++E Sbjct: 68 RMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNVE 127 Query: 146 QIKGTKIFHFGSVSMTHEPSASATLKACIHAKENGALISFDPNLRPALWQDLEQAKIRIK 205 IK +FH+GS+S+ EP SA L+A AKE GAL+S+DPNLR ALW E+A+ +I Sbjct: 128 LIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKIL 187 Query: 206 EGLALADIVKISEEELEFITGLTDLEEGTRQIQTQFKVKVVLVTKAEKGC--FVRFGPGS 263 ADIVK+SE ELEF+TG+ +E+ + +K++LVT ++GC + R G+ Sbjct: 188 SIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGA 247 Query: 264 KWADVPGYKV 273 VP YKV Sbjct: 248 ----VPSYKV 253 >gb|AAP42805.1| fructokinase 1 [Zea mays] Length = 323 Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 117/250 (46%), Positives = 165/250 (66%), Gaps = 8/250 (3%) Query: 28 ITAIGEVLIDFTP--AGLSEKGEQLFECNPGGAPANVVVVLAKLGKSTAFIGKVGEDQFG 85 + + GE+LIDF P AG+S F PGGAPANV + +++LG AF+GK+G+D+FG Sbjct: 8 VVSFGEMLIDFVPTVAGVSLAEAPAFLKAPGGAPANVAIAVSRLGGGAAFVGKLGDDEFG 67 Query: 86 EYLTRILLENGVNTKGLVKESRAKTTLAFVHLKEDGDRSFSFYRNPGADMLLGMDDIDLE 145 L IL +NGV+ G+V +S A+T LAFV L+ DG+R F FYRNP ADMLL D++++E Sbjct: 68 RMLAAILRDNGVDDGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNVE 127 Query: 146 QIKGTKIFHFGSVSMTHEPSASATLKACIHAKENGALISFDPNLRPALWQDLEQAKIRIK 205 IK +FH+GS+S+ EP +A L+A AKE GAL+S+DPNLR ALW E+A+ +I Sbjct: 128 LIKRAAVFHYGSISLIAEPCRTAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTQIL 187 Query: 206 EGLALADIVKISEEELEFITGLTDLEEGTRQIQTQFKVKVVLVTKAEKGC--FVRFGPGS 263 ADIVK+SE ELEF+TG+ +E+ + +K++LVT ++GC + R G+ Sbjct: 188 SIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFHGA 247 Query: 264 KWADVPGYKV 273 VP +KV Sbjct: 248 ----VPSFKV 253 >gb|AAQ10000.1| putative fructokinase 2; S2 self-incompatibility locus-linked 3.16 protein [Petunia integrifolia subsp. inflata] Length = 328 Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 2/230 (0%) Query: 28 ITAIGEVLIDFTP--AGLSEKGEQLFECNPGGAPANVVVVLAKLGKSTAFIGKVGEDQFG 85 I + GE+LIDF P +G+S F PGGAPANV + + +LG ++AF+GK+G+D+FG Sbjct: 12 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGNSAFVGKLGDDEFG 71 Query: 86 EYLTRILLENGVNTKGLVKESRAKTTLAFVHLKEDGDRSFSFYRNPGADMLLGMDDIDLE 145 L IL ENGV +G+ ++ A+T LAFV L+ DG+R F FYRNP ADMLL D+++L+ Sbjct: 72 HMLAGILKENGVKAEGINFDTGARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLD 131 Query: 146 QIKGTKIFHFGSVSMTHEPSASATLKACIHAKENGALISFDPNLRPALWQDLEQAKIRIK 205 I+ KIFH+GS+S+ EP SA LKA AKE GAL+S+DPNLR LW E+A+ +IK Sbjct: 132 VIRSAKIFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSAEEARKQIK 191 Query: 206 EGLALADIVKISEEELEFITGLTDLEEGTRQIQTQFKVKVVLVTKAEKGC 255 AD++K+S+ ELEF+TG +++ + +K++LVT EKGC Sbjct: 192 SIWDKADVIKVSDNELEFLTGSDKIDDESAMSLWHPNLKLLLVTLGEKGC 241 >gb|AAQ09999.1| putative fructokinase 2; S1 self-incompatibility locus-linked 3.16 protein [Petunia integrifolia subsp. inflata] Length = 328 Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 2/230 (0%) Query: 28 ITAIGEVLIDFTP--AGLSEKGEQLFECNPGGAPANVVVVLAKLGKSTAFIGKVGEDQFG 85 I + GE+LIDF P +G+S F PGGAPANV + + +LG ++AF+GK+G+D+FG Sbjct: 12 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGNSAFVGKLGDDEFG 71 Query: 86 EYLTRILLENGVNTKGLVKESRAKTTLAFVHLKEDGDRSFSFYRNPGADMLLGMDDIDLE 145 L IL ENGV +G+ ++ A+T LAFV L+ DG+R F FYRNP ADMLL D+++L+ Sbjct: 72 HMLAGILKENGVKAEGINFDTGARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLD 131 Query: 146 QIKGTKIFHFGSVSMTHEPSASATLKACIHAKENGALISFDPNLRPALWQDLEQAKIRIK 205 I+ KIFH+GS+S+ EP SA LKA AKE GAL+S+DPNLR LW E+A+ +IK Sbjct: 132 VIRSAKIFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSAEEARKQIK 191 Query: 206 EGLALADIVKISEEELEFITGLTDLEEGTRQIQTQFKVKVVLVTKAEKGC 255 AD++K+S+ ELEF+TG +++ + +K++LVT EKGC Sbjct: 192 SIWDKADVIKVSDNELEFLTGSDKIDDESAMSLWHPNLKLLLVTLGEKGC 241 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.138 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 475,098,749 Number of extensions: 19915198 Number of successful extensions: 43908 Number of sequences better than 1.0e-05: 534 Number of HSP's gapped: 43661 Number of HSP's successfully gapped: 534 Length of query: 317 Length of database: 757,237,578 Length adjustment: 125 Effective length of query: 192 Effective length of database: 417,850,203 Effective search space: 80227238976 Effective search space used: 80227238976 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)