BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0587.0017.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00098451.1| COG1670: Acetyltransferases, including N-acet... 103 2e-21 ref|NP_389735.1| similar to hypothetical proteins [Bacillus subt... 102 5e-21 ref|NP_655737.1| Acetyltransf, Acetyltransferase (GNAT) family [... 101 1e-20 ref|NP_978271.1| acetyltransferase, GNAT family [Bacillus cereus... 100 3e-20 ref|NP_831572.1| Ribosomal-protein-alanine acetyltransferase [Ba... 99 4e-20 >ref|ZP_00098451.1| COG1670: Acetyltransferases, including N-acetylases of ribosomal proteins [Desulfitobacterium hafniense] Length = 189 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Query: 13 LVSEHLTLQKIEERHLEEVFGIYSND-TVFEYCGIIPKHNKATVATMIGHFERDFHKKSR 71 L +E L L++ E E +F ++ND V +Y P N ++ + + + Sbjct: 9 LETEGLILRRFELTDAEAMFKNWANDGEVTKYLTWPPHENVEVSLEVLKDWVSLYEDEKF 68 Query: 72 LKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVVRFLFQE 131 +W I + +G I + ++DM+ +GY + + WGKG+ SEA++ ++RF F E Sbjct: 69 YQWAIVLKENGSEPIGSISIVKMDDRIDMVHVGYCIGKRWWGKGVTSEALAELMRFFFAE 128 Query: 132 VEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIYGLLQEEY 187 V+VNRI++ P N S +V+ K G YEGTL+Q +GI D +YGL+ E+Y Sbjct: 129 VQVNRIESRHDPRNPNSGKVMKKCGLLYEGTLKQGDR-CNQGICDCSMYGLVAEDY 183 >ref|NP_389735.1| similar to hypothetical proteins [Bacillus subtilis] pir||C69895 conserved hypothetical protein yoaA - Bacillus subtilis gb|AAB84419.1| putative alanine acetyl transferase [Bacillus subtilis] emb|CAB13746.1| yoaA [Bacillus subtilis subsp. subtilis str. 168] Length = 165 Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 1/156 (0%) Query: 10 FPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIGHFERDFHKK 69 FP+L ++ L L++I ++ E +F +SND V Y G+ + +MI F + +K Sbjct: 2 FPILETDRLILRQITDQDAEAIFACFSNDEVTRYYGLENMESIEQAISMIQTFAALYQEK 61 Query: 70 SRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVVRFLF 129 ++WGI D L+G I QK IGY + HW G ASE +S+VV + F Sbjct: 62 RGIRWGI-ERRDTKELIGTIGFHALAQKHRRAEIGYEIIPEHWRNGFASEVISKVVSYGF 120 Query: 130 QEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQ 165 + ++RI A V NE S R+LLK GF+ EG LRQ Sbjct: 121 SALGLSRIGAVVFTDNEASNRLLLKMGFQKEGVLRQ 156 >ref|NP_655737.1| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis A2012] ref|NP_844292.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] gb|AAP25778.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] Length = 176 Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 2/175 (1%) Query: 10 FPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIGHFERDFHKK 69 FP+L ++ L L+++ E + +SN V Y G P + V +I +F+ ++ + Sbjct: 2 FPILKTDRLILRELTEEDAPSILKCFSNTDVLRYYGQKPLQDIDQVKQIIHNFKLSYNAR 61 Query: 70 SRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVVRFLF 129 S +KWGI N K+ L+G I D++ + + Y HWGKG A+EAVS V+ + F Sbjct: 62 SGIKWGIELKNKKE-LIGTIGFHDWSSEHKRANLSYAFLPEHWGKGYATEAVSEVISYGF 120 Query: 130 QEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIYGLLQ 184 + + RI A V NE S +VLLK GF+ EG L+ ++ D Y LL+ Sbjct: 121 HTIHLKRIGAIVFLENEASNKVLLKLGFEKEGVLKN-YMYQDDIPYDTNFYSLLK 174 >ref|NP_978271.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] gb|AAS40879.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] Length = 176 Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 2/175 (1%) Query: 10 FPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIGHFERDFHKK 69 FP+L ++ L L+++ E + +SN V Y G P + V +I +F+ ++ + Sbjct: 2 FPILKTDRLILRELTEEDAPGILQCFSNTDVLRYYGQKPLQDIDQVKQIIHNFKLSYNAR 61 Query: 70 SRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVVRFLF 129 S +KWGI N K+ L+G I D++ + I Y HWGKG A+EA+S V+ + F Sbjct: 62 SGIKWGIELKNKKE-LIGTIGFHDWSSEHKRANISYAFLPEHWGKGYATEAISEVISYGF 120 Query: 130 QEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIYGLLQ 184 + + RI A V NE S +VLLK GF+ EG L+ ++ D Y LL+ Sbjct: 121 HTLHLKRIGAIVFLENEASNKVLLKLGFEKEGVLKN-YMYQDDIPYDTNFYSLLK 174 >ref|NP_831572.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP08773.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] Length = 176 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 2/175 (1%) Query: 10 FPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIGHFERDFHKK 69 FP+L ++ L L+++ E + +SN V Y G P + V +I +F+ ++ + Sbjct: 2 FPILKTDRLILRELTEEDAPGILQCFSNTDVLRYYGQKPLQDIDQVKQIIHNFKLSYNAR 61 Query: 70 SRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVVRFLF 129 S +KWGI DK L+G I D++ + I Y HWG+G A+EAVS V+ + F Sbjct: 62 SGIKWGI-ELKDKKELIGTIGFHDWSSEHKRANISYAFLPEHWGQGYATEAVSEVISYGF 120 Query: 130 QEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIYGLLQ 184 + + RI A V NE S +VLLK GF+ EG L+ ++ D Y LL+ Sbjct: 121 HTIHLKRIGAIVFLENEASNKVLLKLGFEKEGVLKN-YMYQDDIPYDTNFYSLLK 174 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.137 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 295,261,399 Number of extensions: 11762105 Number of successful extensions: 26615 Number of sequences better than 1.0e-05: 196 Number of HSP's gapped: 26654 Number of HSP's successfully gapped: 196 Length of query: 202 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 82 Effective length of database: 431,425,698 Effective search space: 35376907236 Effective search space used: 35376907236 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 123 (52.0 bits)