BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0586.0078.p
         (91 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_00106501.1| COG0606: Predicted ATPase with chaperone acti...    70   2e-11
ref|NP_623073.1| predicted ATPase with chaperone activity [Therm...    68   8e-11
ref|ZP_00072677.1| COG0606: Predicted ATPase with chaperone acti...    67   2e-10
ref|NP_442386.1| hypothetical protein [Synechocystis sp. PCC 680...    66   3e-10
ref|NP_337477.1| magnesium chelatase, putative [Mycobacterium tu...    65   5e-10

>ref|ZP_00106501.1| COG0606: Predicted ATPase with chaperone activity [Nostoc
           punctiforme]
          Length = 509

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 44/58 (75%)

Query: 6   NLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAEH 63
           + L +GE++LDGSLRPV GVLP+  AA++ G+  +++PA NA EAA++ G+ +Y  +H
Sbjct: 102 DYLFLGEMSLDGSLRPVAGVLPIAAAAQKMGIAGLVIPADNAQEAAVVQGLVVYGCKH 159


>ref|NP_623073.1| predicted ATPase with chaperone activity [Thermoanaerobacter
           tengcongensis]
 gb|AAM24677.1| predicted ATPase with chaperone activity [Thermoanaerobacter
           tengcongensis]
          Length = 510

 Score = 67.8 bits (164), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 43/56 (76%)

Query: 5   ENLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYA 60
           EN+  IGEL+LDGSLR V GVLPMV  A+ +G+ +V+VP  NA EA+++ G+ +YA
Sbjct: 100 ENIAFIGELSLDGSLRGVNGVLPMVMGAKESGILSVVVPYENAQEASVVKGINVYA 155


>ref|ZP_00072677.1| COG0606: Predicted ATPase with chaperone activity [Trichodesmium
           erythraeum IMS101]
          Length = 509

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 43/56 (76%)

Query: 8   LLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAEH 63
           L +GE++LDG+LRPV GVLP+  AA + G+T ++VP GN  EAA++ G+++Y  ++
Sbjct: 104 LFLGEVSLDGTLRPVAGVLPIAAAAHKMGITGLVVPTGNVKEAAVVKGLSVYGFDN 159


>ref|NP_442386.1| hypothetical protein [Synechocystis sp. PCC 6803]
 pir||S75721 hypothetical protein slr0904 - Synechocystis sp. (strain PCC 6803)
 dbj|BAA10456.1| ORF_ID:slr0904~hypothetical protein [Synechocystis sp. PCC 6803]
          Length = 509

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 43/58 (74%)

Query: 6   NLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAEH 63
           + L +GE++LDGSLR + GVLP+   A++ GL  ++VP+GNA EA+++ G+ +Y  +H
Sbjct: 102 DYLFLGEMSLDGSLRAIAGVLPIAATAQKMGLAGIVVPSGNALEASVVQGLKVYGFDH 159


>ref|NP_337477.1| magnesium chelatase, putative [Mycobacterium tuberculosis CDC1551]
 gb|AAK47291.1| magnesium chelatase, putative [Mycobacterium tuberculosis CDC1551]
          Length = 503

 Score = 65.1 bits (157), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query: 5   ENLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTI 58
           EN LL+GEL+LDG +RPV GVLP V AA+R G  AV+VPA N  EA+L+ G+ +
Sbjct: 102 ENTLLLGELSLDGRVRPVRGVLPAVLAAKRDGWPAVVVPADNLPEASLVDGIDV 155


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.316    0.130    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 108,405,751
Number of extensions: 3069388
Number of successful extensions: 10189
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 10221
Number of HSP's successfully gapped: 48
Length of query: 91
Length of database: 757,237,578
Length adjustment: 59
Effective length of query: 32
Effective length of database: 597,046,737
Effective search space: 19105495584
Effective search space used: 19105495584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 120 (50.8 bits)