BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0069.p (460 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_389495.1| glucose-inhibited division protein [Bacillus su... 656 0.0 ref|NP_980171.1| gid protein [Bacillus cereus ATCC 10987] >gi|42... 653 0.0 ref|NP_815357.1| glucose-inhibited division protein [Enterococcu... 651 0.0 ref|NP_464801.1| similar glucose inhibited division protein A [L... 650 0.0 ref|NP_833551.1| Glucose inhibited division protein A [Bacillus ... 650 0.0 >ref|NP_389495.1| glucose-inhibited division protein [Bacillus subtilis] sp|P39815|GID_BACSU Protein gid pir||A69632 glucose-inhibited division protein gid - Bacillus subtilis emb|CAA04423.1| Gid protein [Bacillus subtilis] emb|CAB13486.1| glucose-inhibited division protein [Bacillus subtilis subsp. subtilis str. 168] Length = 435 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/424 (73%), Positives = 363/424 (85%), Gaps = 1/424 (0%) Query: 15 VTVIGAGLAGSEAAWQIASRGVPVRLYEMRPVVKTPAHHTNQFAELVCSNSLRANGLGNA 74 V VIGAGLAGSEAAWQ+A RG+ V+LYEMRPV +TPAHHT++FAELVCSNSLR+N L NA Sbjct: 6 VNVIGAGLAGSEAAWQLAKRGIQVKLYEMRPVKQTPAHHTDKFAELVCSNSLRSNTLANA 65 Query: 75 VGVLKEEMRRLNSLVLGAADRHAVPAGGALAVDRDGFSGEITSTLHNHPLVEVINEELTH 134 VGVLKEEMR L+S ++ AAD +VPAGGALAVDR F+ +T+ + NHP V VINEE+T Sbjct: 66 VGVLKEEMRALDSAIIAAADECSVPAGGALAVDRHEFAASVTNRVKNHPNVTVINEEVTE 125 Query: 135 IPEEGIVVIATGPLTSPSLSAEIKGLLGEEYFYFYDAAAPIVEKDSIDMNKVYLASRYDK 194 IPE G +IATGPLTS SLSA++K L GE+Y YFYDAAAPIVEKDS+DM+KVYL SRYDK Sbjct: 126 IPE-GPTIIATGPLTSESLSAQLKELTGEDYLYFYDAAAPIVEKDSLDMDKVYLKSRYDK 184 Query: 195 GEAAYLNCPMTEEEFDRFYDALISAETAALKDFEKEIYFEGCMPIEIMMKRGKQTALFGP 254 GEAAYLNCPMTEEEFDRF++AL SAET LK+FEKEI+FEGCMPIE+M KRGK+T LFGP Sbjct: 185 GEAAYLNCPMTEEEFDRFHEALTSAETVPLKEFEKEIFFEGCMPIEVMAKRGKKTMLFGP 244 Query: 255 MKPVGLMNPHTGKLPYAVVQLRQDNAAGTLYNLVGFQTHLKWGEQKRVFSLIPGLENAEY 314 MKPVGL +P TGK PYAVVQLRQD+AAGTLYN+VGFQTHLKWG+QK V LIPGLEN E Sbjct: 245 MKPVGLEHPVTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGDQKEVLKLIPGLENVEI 304 Query: 315 VRYGVMHRNTFINSPKLLHPTYQMKGRERLFFAGQMTGVEGYVESAASGLIAGMNAARAA 374 VRYGVMHRNTFINSP LL PTYQ K R LFFAGQMTGVEGYVESAASGL+AG+NAA+ Sbjct: 305 VRYGVMHRNTFINSPSLLKPTYQFKNRSDLFFAGQMTGVEGYVESAASGLVAGINAAKLV 364 Query: 375 LGEEGLIFPQDTVLGSMPAYITSADPEHFQPMNANFGLLPKPEQRIRSKKEKNELLAHRA 434 LGEE +IFPQ+T +GSM YIT+ + ++FQPMNANFGLL + +I++KKE+NE A+RA Sbjct: 365 LGEELVIFPQETAIGSMAHYITTTNQKNFQPMNANFGLLKELPVKIKNKKERNEQYANRA 424 Query: 435 LDSL 438 ++++ Sbjct: 425 IETI 428 >ref|NP_980171.1| gid protein [Bacillus cereus ATCC 10987] gb|AAS42779.1| gid protein [Bacillus cereus ATCC 10987] Length = 434 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/430 (72%), Positives = 361/430 (83%), Gaps = 1/430 (0%) Query: 12 TAKVTVIGAGLAGSEAAWQIASRGVPVRLYEMRPVVKTPAHHTNQFAELVCSNSLRANGL 71 T V VIGAGLAGSEAA+QIA RGV VRLYEMRPV +TPAHHT++FAELVCSNSLRAN L Sbjct: 3 TQVVNVIGAGLAGSEAAYQIAKRGVQVRLYEMRPVRQTPAHHTDKFAELVCSNSLRANTL 62 Query: 72 GNAVGVLKEEMRRLNSLVLGAADRHAVPAGGALAVDRDGFSGEITSTLHNHPLVEVINEE 131 NAVGV+KEEMR ++S+++ AAD +VPAGGALAVDR F+ ++T + NHP V V+NEE Sbjct: 63 TNAVGVIKEEMRLMDSVIIRAADECSVPAGGALAVDRHEFAAKVTEYVKNHPNVTVVNEE 122 Query: 132 LTHIPEEGIVVIATGPLTSPSLSAEIKGLLGEEYFYFYDAAAPIVEKDSIDMNKVYLASR 191 +T IPE G VIATGPLTSP LSA++K L GE+YFYFYDAAAPIVEKDSIDMNKVYL SR Sbjct: 123 ITEIPE-GPTVIATGPLTSPDLSAQLKELTGEDYFYFYDAAAPIVEKDSIDMNKVYLKSR 181 Query: 192 YDKGEAAYLNCPMTEEEFDRFYDALISAETAALKDFEKEIYFEGCMPIEIMMKRGKQTAL 251 YDKGEAAYLNCPMTEEEFDRFY+ALI+AET LK+FEKEI+FEGCMP+E+M RG+QT + Sbjct: 182 YDKGEAAYLNCPMTEEEFDRFYEALIAAETVPLKEFEKEIFFEGCMPVEVMASRGRQTLV 241 Query: 252 FGPMKPVGLMNPHTGKLPYAVVQLRQDNAAGTLYNLVGFQTHLKWGEQKRVFSLIPGLEN 311 FGPMKPVGL +P TGK PYAVVQLRQD+AAGTLYN+VGFQTHLKWG QK V LIPGLEN Sbjct: 242 FGPMKPVGLEDPKTGKTPYAVVQLRQDDAAGTLYNIVGFQTHLKWGPQKEVLQLIPGLEN 301 Query: 312 AEYVRYGVMHRNTFINSPKLLHPTYQMKGRERLFFAGQMTGVEGYVESAASGLIAGMNAA 371 AE VRYGVMHRNTFINSP LL PTYQ K R+ LFFAGQMTGVEGYVESAASGL+AG+NAA Sbjct: 302 AEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAGQMTGVEGYVESAASGLLAGINAA 361 Query: 372 RAALGEEGLIFPQDTVLGSMPAYITSADPEHFQPMNANFGLLPKPEQRIRSKKEKNELLA 431 R GEE ++ P T +GSM YIT+ + ++FQPMNANFGL E++I+ K E+NE A Sbjct: 362 RLVKGEEPVVLPPVTAMGSMANYITATNAKNFQPMNANFGLFAPLEKKIKKKAERNEAYA 421 Query: 432 HRALDSLAGF 441 RAL+++ F Sbjct: 422 TRALETIRNF 431 >ref|NP_815357.1| glucose-inhibited division protein [Enterococcus faecalis V583] sp|Q834K1|GID_ENTFA Protein gid homolog gb|AAO81427.1| glucose-inhibited division protein [Enterococcus faecalis V583] Length = 435 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/428 (72%), Positives = 363/428 (84%), Gaps = 1/428 (0%) Query: 12 TAKVTVIGAGLAGSEAAWQIASRGVPVRLYEMRPVVKTPAHHTNQFAELVCSNSLRANGL 71 T KVT+IGAGLAGSEAAWQ+A+ GVPV LYEMRPV KTPAH T FAELVCSNSLR N L Sbjct: 2 TKKVTIIGAGLAGSEAAWQVANAGVPVDLYEMRPVKKTPAHQTENFAELVCSNSLRGNSL 61 Query: 72 GNAVGVLKEEMRRLNSLVLGAADRHAVPAGGALAVDRDGFSGEITSTLHNHPLVEVINEE 131 NAVGVLKEEMRRLNS+++G+AD+ AVPAGGALAVDRD FS IT + +HPL+ + NEE Sbjct: 62 TNAVGVLKEEMRRLNSIIIGSADQTAVPAGGALAVDRDSFSETITEKIKSHPLITIKNEE 121 Query: 132 LTHIPEEGIVVIATGPLTSPSLSAEIKGLLGEEYFYFYDAAAPIVEKDSIDMNKVYLASR 191 +T IPE GIV+IATGPLTS SLS +I+ G E FYFYDAAAPI++K +IDM+KVYL SR Sbjct: 122 ITDIPE-GIVIIATGPLTSESLSQKIQEFNGSEGFYFYDAAAPIIDKSTIDMDKVYLKSR 180 Query: 192 YDKGEAAYLNCPMTEEEFDRFYDALISAETAALKDFEKEIYFEGCMPIEIMMKRGKQTAL 251 Y+KGEAAYLNCPMTEEEF+ F++AL++AE L+ FEKE +FEGCMPIE+M +RG +T L Sbjct: 181 YNKGEAAYLNCPMTEEEFNAFHEALVNAEVVPLRTFEKEKFFEGCMPIEVMAQRGIKTML 240 Query: 252 FGPMKPVGLMNPHTGKLPYAVVQLRQDNAAGTLYNLVGFQTHLKWGEQKRVFSLIPGLEN 311 FGPMKPVGL +P TGK PYAV+QLRQDNAA +LYN+VGFQTHLKWGEQKRVF +IPGLEN Sbjct: 241 FGPMKPVGLEDPKTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGLEN 300 Query: 312 AEYVRYGVMHRNTFINSPKLLHPTYQMKGRERLFFAGQMTGVEGYVESAASGLIAGMNAA 371 AE+VRYGVMHRN+F+NSP+LL PTYQ K R+ LFFAGQMTGVEGYVESAASGL+AG+NAA Sbjct: 301 AEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAGQMTGVEGYVESAASGLLAGINAA 360 Query: 372 RAALGEEGLIFPQDTVLGSMPAYITSADPEHFQPMNANFGLLPKPEQRIRSKKEKNELLA 431 R A GEE + FP++T LGSM YIT A+ +HFQPMNANFGL P+ +RIR KKE+ E +A Sbjct: 361 RLAKGEEPIEFPRETTLGSMAYYITHAEGKHFQPMNANFGLFPELPERIRDKKERYEAIA 420 Query: 432 HRALDSLA 439 +RALD A Sbjct: 421 NRALDVQA 428 >ref|NP_464801.1| similar glucose inhibited division protein A [Listeria monocytogenes EGD-e] sp|Q8Y7K1|GID_LISMO Protein gid homolog pir||AD1234 glucose inhibited division protein A homolog gid [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC99354.1| gid [Listeria monocytogenes] Length = 434 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/428 (72%), Positives = 363/428 (84%), Gaps = 1/428 (0%) Query: 15 VTVIGAGLAGSEAAWQIASRGVPVRLYEMRPVVKTPAHHTNQFAELVCSNSLRANGLGNA 74 V VIGAGLAGSEA WQ+ +RGV V LYEMRPV +TPAHHT++FAELVC+NSLRANGL NA Sbjct: 5 VNVIGAGLAGSEAVWQLVNRGVKVDLYEMRPVKQTPAHHTDKFAELVCTNSLRANGLTNA 64 Query: 75 VGVLKEEMRRLNSLVLGAADRHAVPAGGALAVDRDGFSGEITSTLHNHPLVEVINEELTH 134 VGV+KEEMR L+S+++ AAD+ +VPAGGALAVDR FSG IT + NHPLV V EE+T Sbjct: 65 VGVIKEEMRMLDSIIIEAADKASVPAGGALAVDRHEFSGYITDKVKNHPLVTVHTEEVTT 124 Query: 135 IPEEGIVVIATGPLTSPSLSAEIKGLLGEEYFYFYDAAAPIVEKDSIDMNKVYLASRYDK 194 IPE G +IATGPLTSP+L+ EIK L GEEY YFYDAAAPI+EKDSIDM+KVYL SRYDK Sbjct: 125 IPE-GPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDK 183 Query: 195 GEAAYLNCPMTEEEFDRFYDALISAETAALKDFEKEIYFEGCMPIEIMMKRGKQTALFGP 254 GEAAYLNCPM+EEEF+ FY+AL++AETAALK+FEKE++FEGCMPIE+M KRG +T LFGP Sbjct: 184 GEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGP 243 Query: 255 MKPVGLMNPHTGKLPYAVVQLRQDNAAGTLYNLVGFQTHLKWGEQKRVFSLIPGLENAEY 314 +KPVGL +P TGK PYAV+QLRQD+AAGTLYN+VGFQTHLKWGEQKRVF +IPGLENAE Sbjct: 244 LKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLKWGEQKRVFGMIPGLENAEI 303 Query: 315 VRYGVMHRNTFINSPKLLHPTYQMKGRERLFFAGQMTGVEGYVESAASGLIAGMNAARAA 374 VRYGVMHRNTFINSP +L PTYQ+K R LFFAGQMTGVEGYVESAASGL AG+NAA Sbjct: 304 VRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVEGYVESAASGLAAGINAANFI 363 Query: 375 LGEEGLIFPQDTVLGSMPAYITSADPEHFQPMNANFGLLPKPEQRIRSKKEKNELLAHRA 434 +E ++FP +T +GS+ YITSA + FQPMN NFGL P+ E +IR+K+E+NE LA RA Sbjct: 364 QEKELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERA 423 Query: 435 LDSLAGFA 442 L+++ A Sbjct: 424 LNAIKKVA 431 >ref|NP_833551.1| Glucose inhibited division protein A [Bacillus cereus ATCC 14579] sp|Q819X4|GID_BACCR Protein gid homolog gb|AAP10752.1| Glucose inhibited division protein A [Bacillus cereus ATCC 14579] Length = 434 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/430 (72%), Positives = 361/430 (83%), Gaps = 1/430 (0%) Query: 12 TAKVTVIGAGLAGSEAAWQIASRGVPVRLYEMRPVVKTPAHHTNQFAELVCSNSLRANGL 71 T V VIGAGLAGSEAA+QIA RGV VRLYEMRPV +TPAHHT++FAELVCSNSLRAN L Sbjct: 3 TQVVNVIGAGLAGSEAAYQIAKRGVQVRLYEMRPVRQTPAHHTDKFAELVCSNSLRANTL 62 Query: 72 GNAVGVLKEEMRRLNSLVLGAADRHAVPAGGALAVDRDGFSGEITSTLHNHPLVEVINEE 131 NAVGV+KEEMR ++S+++ AAD +VPAGGALAVDR F+ ++T + NHP V V+NEE Sbjct: 63 TNAVGVIKEEMRLMDSVIIRAADECSVPAGGALAVDRHEFAAKVTEYVKNHPNVTVMNEE 122 Query: 132 LTHIPEEGIVVIATGPLTSPSLSAEIKGLLGEEYFYFYDAAAPIVEKDSIDMNKVYLASR 191 +T IPE G +IATGPLTSP LSA++K L GE+YFYFYDAAAPIVEKDSIDMNKVYL SR Sbjct: 123 ITDIPE-GPTIIATGPLTSPDLSAKLKELTGEDYFYFYDAAAPIVEKDSIDMNKVYLKSR 181 Query: 192 YDKGEAAYLNCPMTEEEFDRFYDALISAETAALKDFEKEIYFEGCMPIEIMMKRGKQTAL 251 YDKGEAAYLNCPMTEEEFDRFY+ALI+AET LK+FEKEI+FEGCMP+E+M RG+QT + Sbjct: 182 YDKGEAAYLNCPMTEEEFDRFYEALIAAETVPLKEFEKEIFFEGCMPVEVMASRGRQTLV 241 Query: 252 FGPMKPVGLMNPHTGKLPYAVVQLRQDNAAGTLYNLVGFQTHLKWGEQKRVFSLIPGLEN 311 FGPMKPVGL +P TGK PYAVVQLRQD+AAGTLYN+VGFQTHLKWG QK V LIPGLEN Sbjct: 242 FGPMKPVGLEDPKTGKTPYAVVQLRQDDAAGTLYNIVGFQTHLKWGPQKEVLQLIPGLEN 301 Query: 312 AEYVRYGVMHRNTFINSPKLLHPTYQMKGRERLFFAGQMTGVEGYVESAASGLIAGMNAA 371 AE VRYGVMHRNTFINSP LL PTYQ K R+ LFFAGQMTGVEGYVESAASGL+AG+NAA Sbjct: 302 AEIVRYGVMHRNTFINSPNLLRPTYQYKQRDDLFFAGQMTGVEGYVESAASGLLAGINAA 361 Query: 372 RAALGEEGLIFPQDTVLGSMPAYITSADPEHFQPMNANFGLLPKPEQRIRSKKEKNELLA 431 R GEE ++ P T +GSM YIT+ + ++FQPMNANFGL E++I+ K E+NE A Sbjct: 362 RLVQGEEPVVLPPVTAMGSMANYITATNAKNFQPMNANFGLFAPLEKKIKKKVERNEAYA 421 Query: 432 HRALDSLAGF 441 RAL+++ F Sbjct: 422 ARALETIRNF 431 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 682,731,105 Number of extensions: 29173080 Number of successful extensions: 84353 Number of sequences better than 1.0e-05: 700 Number of HSP's gapped: 83816 Number of HSP's successfully gapped: 700 Length of query: 460 Length of database: 757,237,578 Length adjustment: 129 Effective length of query: 331 Effective length of database: 406,989,807 Effective search space: 134713626117 Effective search space used: 134713626117 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)