BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0010.p (861 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P04766|IF2_BACST Translation initiation factor IF-2 >gi|80212... 837 0.0 ref|NP_833533.1| Bacterial Protein Translation Initiation Factor... 807 0.0 ref|NP_243279.1| translation initiation factor IF-2 [Bacillus ha... 807 0.0 ref|NP_657781.1| GTP_EFTU, Elongation factor Tu GTP binding doma... 807 0.0 ref|NP_980148.1| translation initiation factor IF-2 [Bacillus ce... 804 0.0 >sp|P04766|IF2_BACST Translation initiation factor IF-2 pir||A27892 translation initiation factor IF-2 - Bacillus stearothermophilus emb|CAA27987.1| unnamed protein product [Geobacillus stearothermophilus] Length = 741 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/594 (68%), Positives = 484/594 (81%), Gaps = 3/594 (0%) Query: 268 QPVERREKIDNTPKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTI 327 QP ++ +++ PKKI GS+TV E AK L ++ SE+IKKL +GVMATINQ+LD D I Sbjct: 150 QPAKKEKEL---PKKITFEGSLTVAELAKKLGREPSEIIKKLFMLGVMATINQDLDKDAI 206 Query: 328 LLLSSEFGVEVEVKIPVDEDSFETVEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRS 387 L+ S++GVEVE K+ +DE +FE +E D+ EDL RPPVVTIMGHVDHGKTTLLDAIR Sbjct: 207 ELICSDYGVEVEEKVTIDETNFEAIEIADAPEDLVERPPVVTIMGHVDHGKTTLLDAIRH 266 Query: 388 TNVTGGEAGGITQHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADD 447 + VT EAGGITQHIGAYQV +N KKITFLDTPGHEAFT MRARG QVTD+ I+VVAADD Sbjct: 267 SKVTEQEAGGITQHIGAYQVTVNDKKITFLDTPGHEAFTTMRARGRQVTDIVILVVAADD 326 Query: 448 GVMPQTVEAINHAKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNL 507 GVMPQTVEAINHAKAA +PIIVA+NK+DKP A+PDRV QEL Y LVPEEWGGDTIF L Sbjct: 327 GVMPQTVEAINHAKAANVPIIVAINKMDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKL 386 Query: 508 SAKQRINXXXXXXXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKV 567 SAK + V+E+ E KANP++RA GTVIEA+LDK RGPVA +LVQ GTLKV Sbjct: 387 SAKTKEGLDHLLEMILLVSEMEELKANPNRRAVGTVIEAKLDKGRGPVATLLVQAGTLKV 446 Query: 568 GDAFVAGNCFGRVRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAI 627 GD V G +GRVRAMVND GR++KEAGPS PVEITGL +VPQAGD FM FEDE+KAR I Sbjct: 447 GDPIVVGTTYGRVRAMVNDSGRRVKEAGPSMPVEITGLHDVPQAGDRFMVFEDEKKARQI 506 Query: 628 ADRRSTSQRQSELNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEV 687 + R+ Q Q + + TRV+LDDLF+ IK+GE+K+LN+I+K DVQGSVEAL +L KI+V Sbjct: 507 GEARAQRQLQEQRSVKTRVSLDDLFEQIKQGEMKELNLIVKADVQGSVEALVAALQKIDV 566 Query: 688 EGVRVKIIHSGAGAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYN 747 EGVRVKIIH+ GAITESDI+LA ASNAIVIGFNVRPDA K AAE EKVD+RLH IIYN Sbjct: 567 EGVRVKIIHAAVGAITESDISLATASNAIVIGFNVRPDANAKRAAESEKVDIRLHRIIYN 626 Query: 748 VIEEIESAMKGMLDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRS 807 VIEEIE+AMKGMLDP Y+E +IG AEVR FK+SKVGTIAGC VT GKITR++++RLIR Sbjct: 627 VIEEIEAAMKGMLDPEYEEKVIGQAEVRQTFKVSKVGTIAGCYVTDGKITRDSKVRLIRQ 686 Query: 808 GIVVFQGKIDTLKRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 GIVV++G+ID+LKR+KDD +EVAQGYECG+T++ +ND+ EGD+IEA++M+ V R Sbjct: 687 GIVVYEGEIDSLKRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEAYVMQEVAR 740 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 36/49 (73%) Query: 12 KLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMENGSVSKVEQFFK 60 K+RVYEYAK N+ SK++I LK +N+ VNNHM+++E V K++ ++ Sbjct: 3 KMRVYEYAKKQNVPSKDVIHKLKEMNIEVNNHMAMLEADVVEKLDHQYR 51 >ref|NP_833533.1| Bacterial Protein Translation Initiation Factor 2 (IF-2) [Bacillus cereus ATCC 14579] sp|Q812X7|IF2_BACCR Translation initiation factor IF-2 gb|AAP10734.1| Bacterial Protein Translation Initiation Factor 2 (IF-2) [Bacillus cereus ATCC 14579] Length = 686 Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/591 (67%), Positives = 485/591 (82%), Gaps = 1/591 (0%) Query: 272 RREKIDNTPKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLS 331 ++ +I TP KI GS+TVG+ AK L K+ SE+IKKL +G+MATINQ+LD DTI L++ Sbjct: 96 QQTQIVETPDKITFSGSLTVGDLAKKLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIA 155 Query: 332 SEFGVEVEVKIPVDEDSFET-VEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNV 390 +++G+EVE ++ V E FET ++E D EE+L+ RP VVTIMGHVDHGKTTLLD+IR++ V Sbjct: 156 NDYGIEVEEEVIVSETEFETFIDEQDDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKV 215 Query: 391 TGGEAGGITQHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVM 450 T GEAGGITQHIGAYQVE+N KKITFLDTPGH AFT MRARGAQVTD+TI+VVAADDGVM Sbjct: 216 TAGEAGGITQHIGAYQVEVNDKKITFLDTPGHAAFTTMRARGAQVTDITILVVAADDGVM 275 Query: 451 PQTVEAINHAKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAK 510 PQTVEAINHAKAAG+PIIVAVNK+DKP A+PDRV QELT YELVPE WGGDTIFV +SA Sbjct: 276 PQTVEAINHAKAAGVPIIVAVNKMDKPAANPDRVMQELTEYELVPEAWGGDTIFVPISAI 335 Query: 511 QRINXXXXXXXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDA 570 Q V+EV EYKANP++ A GTVIEA+LDK +G +A +LVQNGTL+VGD Sbjct: 336 QGEGIDNLLEMILLVSEVEEYKANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDP 395 Query: 571 FVAGNCFGRVRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADR 630 V G FGRVRAMV+D GR++K AGPSTPVEITGL EVPQAGD FMAF DE+KAR I + Sbjct: 396 IVVGTSFGRVRAMVSDIGRRVKVAGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGES 455 Query: 631 RSTSQRQSELNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGV 690 R+ ++ ++++L+DLF+ I+EG++K++N+I+K DVQGSVEA+ SL KI+VEGV Sbjct: 456 RAQEALVAQRGEKSKLSLEDLFQQIQEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGV 515 Query: 691 RVKIIHSGAGAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIE 750 +VKIIH+G GAITESDI LA+ASNAIVIGFNVRPD K AE E VD+RLH IIY VIE Sbjct: 516 KVKIIHTGVGAITESDIILASASNAIVIGFNVRPDVNAKRTAELENVDIRLHRIIYKVIE 575 Query: 751 EIESAMKGMLDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIV 810 EIE+AM+GMLDP ++E +IG AEVR FK++KVGTIAGC VT GKITR++ +R+IR G+V Sbjct: 576 EIEAAMQGMLDPEFEEKVIGQAEVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVV 635 Query: 811 VFQGKIDTLKRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 +F+G++DTLKRFKDD KEVAQ YECGIT+ERYND+ EGDIIEA+IME V+R Sbjct: 636 IFEGQLDTLKRFKDDVKEVAQNYECGITIERYNDLKEGDIIEAYIMEEVKR 686 >ref|NP_243279.1| translation initiation factor IF-2 [Bacillus halodurans] sp|Q9KA77|IF2_BACHD Translation initiation factor IF-2 pir||E83951 translation initiation factor IF-2 infB [imported] - Bacillus halodurans (strain C-125) dbj|BAB06132.1| translation initiation factor IF-2 [Bacillus halodurans] Length = 730 Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/582 (68%), Positives = 474/582 (81%) Query: 280 PKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEVE 339 P+K+ GS+TVGE A+ L+K+ SE+IKKL+ +GVMATINQELD D+I L+ ++GVEVE Sbjct: 148 PEKVTFSGSLTVGELAEKLNKEPSELIKKLMFLGVMATINQELDKDSIELICEDYGVEVE 207 Query: 340 VKIPVDEDSFETVEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGGIT 399 ++ +DE E+ D L+ RPPVVTIMGHVDHGKTTLLD+IR+T VT GEAGGIT Sbjct: 208 EEVIIDETDIESYVVEDDPSLLKERPPVVTIMGHVDHGKTTLLDSIRNTKVTEGEAGGIT 267 Query: 400 QHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINH 459 QHIGAYQV + KKITFLDTPGH AFT MRARGAQVTD+TI+VVAADDGVMPQT EAI+H Sbjct: 268 QHIGAYQVTVEGKKITFLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTKEAISH 327 Query: 460 AKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXXXX 519 AKAAG+PIIVAVNK+DK A+PDRV QELT YELVPE WGG+TIFVN+SA Sbjct: 328 AKAAGVPIIVAVNKMDKETANPDRVMQELTEYELVPEAWGGETIFVNVSALTGTGIDELL 387 Query: 520 XXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCFGR 579 VAEV E KANPD+ ARGTVIEAELDK RGPVA +LVQ+GTLKVGD V G+ FGR Sbjct: 388 EMVLLVAEVEELKANPDRLARGTVIEAELDKGRGPVATLLVQSGTLKVGDPIVVGSTFGR 447 Query: 580 VRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQSE 639 VRAMVND+GR++K GPSTPVEITGL +VPQAGD F AF DE+KAR+I + R+T Q++ E Sbjct: 448 VRAMVNDEGRRVKAVGPSTPVEITGLNDVPQAGDQFQAFADEKKARSIGEARATRQKEEE 507 Query: 640 LNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHSGA 699 ++V+LDDLF I++GE+K++NVIIK DVQGSVEA++GSL KI+VEGV++ IIH+G Sbjct: 508 RAETSKVSLDDLFNQIQQGEVKEINVIIKADVQGSVEAMRGSLEKIDVEGVKINIIHTGV 567 Query: 700 GAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMKGM 759 GAITESDI LAAASNAIVIGFNVRPD K AEQEKVD+RLH +IYN IEEIE+AMKGM Sbjct: 568 GAITESDIILAAASNAIVIGFNVRPDGGAKRTAEQEKVDIRLHRVIYNAIEEIEAAMKGM 627 Query: 760 LDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKIDTL 819 LDP Y+E IIG EVR FK+S++GTIAG VT GKI R+A +RLIR G+V+++G I+ L Sbjct: 628 LDPEYEEKIIGQVEVRTTFKVSRIGTIAGSYVTEGKIVRDATVRLIRDGVVIYEGSINAL 687 Query: 820 KRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 KRFKDD KEVAQGYECGITLE +ND+ EGDIIEA++ME +ER Sbjct: 688 KRFKDDVKEVAQGYECGITLENFNDIKEGDIIEAYVMEEIER 729 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/45 (55%), Positives = 36/45 (80%) Query: 12 KLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMENGSVSKVE 56 K+R+YEYAK N+SSKE+I LK LNV V+NHMSV++ +++ +E Sbjct: 3 KMRIYEYAKEKNLSSKEVIEKLKGLNVHVSNHMSVIDEKTITLLE 47 >ref|NP_657781.1| GTP_EFTU, Elongation factor Tu GTP binding domain [Bacillus anthracis A2012] ref|NP_846193.1| translation initiation factor IF-2 [Bacillus anthracis str. Ames] sp|Q81WM3|IF2_BACAA Translation initiation factor IF-2 gb|AAP27679.1| translation initiation factor IF-2 [Bacillus anthracis str. Ames] Length = 686 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/584 (67%), Positives = 481/584 (82%), Gaps = 1/584 (0%) Query: 279 TPKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEV 338 TP KI GS+TVG+ AK L K+ SE+IKKL +G+MATINQ+LD DTI L+++++G+EV Sbjct: 103 TPDKITFSGSLTVGDLAKKLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGIEV 162 Query: 339 EVKIPVDEDSFET-VEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGG 397 E ++ V E FET ++E D EE+L+ RP VVTIMGHVDHGKTTLLD+IR++ VT GEAGG Sbjct: 163 EEEVIVSETEFETFIDEQDDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGG 222 Query: 398 ITQHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAI 457 ITQHIGAYQVE+N KKITFLDTPGH AFT MRARGAQVTD+TIIVVAADDGVMPQTVEAI Sbjct: 223 ITQHIGAYQVELNDKKITFLDTPGHAAFTTMRARGAQVTDITIIVVAADDGVMPQTVEAI 282 Query: 458 NHAKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXX 517 NHAKAAG+PIIVAVNK+DKP A+PDRV QELT YELVPE WGGDTIFV +SA Q Sbjct: 283 NHAKAAGVPIIVAVNKMDKPAANPDRVMQELTEYELVPEAWGGDTIFVPISAIQGEGIDN 342 Query: 518 XXXXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCF 577 ++EV EYKANP++ A GTVIEA+LDK +G +A +LVQNGTL+VGD V G F Sbjct: 343 LLEMILLISEVEEYKANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGTSF 402 Query: 578 GRVRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQ 637 GRVRAMV+D GR++K AGPSTPVEITGL EVPQAGD FMAF DE+KAR I + R+ Sbjct: 403 GRVRAMVSDIGRRVKVAGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALL 462 Query: 638 SELNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHS 697 ++ ++++L+DLF+ I+EG++K++N+I+K DVQGSVEA+ SL KI+VEGV+VKIIH+ Sbjct: 463 AQRGEKSKLSLEDLFQQIQEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHT 522 Query: 698 GAGAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMK 757 G GAITESDI LA+ASNAIVIGFNVRPD K AE E VD+RLH IIY VIEEIE+AM+ Sbjct: 523 GVGAITESDIILASASNAIVIGFNVRPDVNAKRTAELENVDIRLHRIIYKVIEEIEAAMQ 582 Query: 758 GMLDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKID 817 GMLDP ++E +IG AEVR FK++KVGTIAGC VT GKITR++ +R+IR G+V+F+G++D Sbjct: 583 GMLDPEFEEKVIGQAEVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQLD 642 Query: 818 TLKRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 TLKRFKDD KEVAQ YECGIT+ERYND+ EGDIIEA+IME V+R Sbjct: 643 TLKRFKDDVKEVAQNYECGITIERYNDLKEGDIIEAYIMEEVKR 686 >ref|NP_980148.1| translation initiation factor IF-2 [Bacillus cereus ATCC 10987] gb|AAS42756.1| translation initiation factor IF-2 [Bacillus cereus ATCC 10987] Length = 686 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/584 (67%), Positives = 481/584 (82%), Gaps = 1/584 (0%) Query: 279 TPKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEV 338 TP KI GS+TVG+ AK L K+ SE+IKKL +G+MATINQ+LD DTI L+++++G+EV Sbjct: 103 TPDKITFSGSLTVGDLAKKLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGIEV 162 Query: 339 EVKIPVDEDSFET-VEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGG 397 E ++ V E FET ++E D EE+L+ RP VVTIMGHVDHGKTTLLD+IR++ VT GEAGG Sbjct: 163 EEEVIVSETEFETFIDEQDDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGG 222 Query: 398 ITQHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAI 457 ITQHIGAYQVE+N KKITFLDTPGH AFT MRARGAQVTD+TI+VVAADDGVMPQTVEAI Sbjct: 223 ITQHIGAYQVEVNDKKITFLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTVEAI 282 Query: 458 NHAKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXX 517 NHAKAAG+PIIVAVNK+DKP A+PDRV QELT YELVPE WGGDTIFV +SA Q Sbjct: 283 NHAKAAGVPIIVAVNKMDKPAANPDRVMQELTEYELVPEAWGGDTIFVPISAIQGEGIDN 342 Query: 518 XXXXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCF 577 V+EV EYKANP++ A GTVIEA+LDK +G +A +LVQNGTL+VGD V G F Sbjct: 343 LLEMILLVSEVEEYKANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGTTF 402 Query: 578 GRVRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQ 637 GRVRAMV+D GR++K AGPSTPVEITGL EVPQAGD FMAF DE+KAR I + R+ Sbjct: 403 GRVRAMVSDIGRRVKVAGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALL 462 Query: 638 SELNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHS 697 ++ ++++L+DLF+ I+EG++K++N+I+K DVQGSVEA+ SL KI+VEGV+VKIIH+ Sbjct: 463 AQRGEKSKLSLEDLFQQIQEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHT 522 Query: 698 GAGAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMK 757 G GAITESDI LA+ASNAIVIGFNVRPD K AE E VD+RLH IIY VIEEIE+AM+ Sbjct: 523 GVGAITESDIILASASNAIVIGFNVRPDVNAKRTAELENVDIRLHRIIYKVIEEIEAAMQ 582 Query: 758 GMLDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKID 817 GMLDP ++E +IG AEVR FK++KVGTIAGC VT GKITR++ +R+IR G+V+++G++D Sbjct: 583 GMLDPEFEEKVIGQAEVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIYEGQLD 642 Query: 818 TLKRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 TLKRFKDD KEVAQ YECGIT+E+YND+ EGDIIEA+IME V+R Sbjct: 643 TLKRFKDDVKEVAQNYECGITIEKYNDLKEGDIIEAYIMEEVKR 686 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.312 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,127,474,790 Number of extensions: 44953642 Number of successful extensions: 150498 Number of sequences better than 1.0e-05: 3412 Number of HSP's gapped: 147333 Number of HSP's successfully gapped: 3453 Length of query: 861 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 727 Effective length of database: 393,414,312 Effective search space: 286012204824 Effective search space used: 286012204824 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 130 (54.7 bits)