BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0031.p (782 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00143934.1| hypothetical protein [Fusobacterium nucleatum... 573 e-162 ref|NP_812820.1| conserved hypothetical protein [Bacteroides the... 293 1e-77 ref|ZP_00057355.1| hypothetical protein [Thermobifida fusca] 274 6e-72 ref|NP_824633.1| hypothetical protein [Streptomyces avermitilis ... 232 3e-59 ref|NP_628961.1| conserved hypothetical protein SCD63A.15 [Strep... 202 2e-50 >ref|ZP_00143934.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gb|EAA24469.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 758 Score = 573 bits (1478), Expect = e-162, Method: Compositional matrix adjust. Identities = 298/767 (38%), Positives = 452/767 (58%), Gaps = 24/767 (3%) Query: 1 VKATAEAGVHIFGVRHLSPGGAKHLLEYLNELQPTAVLIEGPSDATDEIRHLTHRSTKPP 60 +K +EA HIFGVRH SP GA ++ EYL++++P +LIEGPSD D + + ++ PP Sbjct: 1 MKKQSEAKPHIFGVRHFSPAGAYYVREYLDKVKPKIILIEGPSDFNDLMSEIVGKNVSPP 60 Query: 61 VAILAFTEDLPVRTALWPLAVYSPEYQGMKWARDNGAEAAFIDLPSSVTLSLQDAVRRDG 120 +AI+A+T + P++T ++P A +SPEYQ + WA++N E F DL SS+ L G Sbjct: 61 IAIMAYTLEAPIQTIVYPFAEFSPEYQAILWAKENKVECRFCDLASSIFL---------G 111 Query: 121 ISGREEVKPEADEAGRLFTEEVKEQESVYSRIARLAGEHDYDMYWERNYEHNANAGAYRA 180 I +E E E+ F ++ +I + + D +++WER E ++ AY Sbjct: 112 IENAKEKNEEQGESLNSF---------IHRKIDEYSEDSDSEVFWERVMEQASDYNAYYN 162 Query: 181 AILSFSAEMRLLSESREQQEQPKEHAYNALREAYMRRQIRETIAAGHAPDKIVVICGAYH 240 + +R L+ S + A N +REAYM + + + G+ D+I +I GA+H Sbjct: 163 GARDYGKNLRELTLSNTLSD-----AKNIIREAYMSKVVFDVCNEGYKTDEIAMIVGAFH 217 Query: 241 ASALADLSDVLNDKELEGLPSRSTKLTLMPYSYYKLSTMSGYGAGNEAPQYFEMMWETMA 300 + + +L +KE++ LP K TLMPYSY+KLST S YGAGN+AP Y+E +W+ Sbjct: 218 VEGIESGNFILTEKEVKQLPKLEAKKTLMPYSYHKLSTYSNYGAGNKAPGYYEFLWKGFN 277 Query: 301 AGRPEELAHLYLSTVAGHLRSSGTHRSTAEVIEAVRLAESLAALHGGSAPTLRDLRDAAQ 360 G +YLS +A + R +G S+A++IEAV+LA SLA +H PTL+D++DAA Sbjct: 278 KGDIFYPTFIYLSKIAEYQRKTGNMVSSAQIIEAVQLAISLANIHDSKIPTLKDIQDAAI 337 Query: 361 TLLGHGELSVIADALARVDVGTAIGHLADGVSQTPIQDDXXXXXXXXXXXXXXSTVATEL 420 T + HG + + A+A V+VG IG + QT IQ D S ATEL Sbjct: 338 TCMAHGSYAELVMAMANVEVGKKIGKIPQEAIQTSIQSDFYNLLKELKLEKYQSLSATEL 397 Query: 421 PLDLRENRRVSSEEAAYLDLNRSMLFHRLKLLGITFAKNRPSGQDAATWAEYWIIQWSPE 480 LDLRE RV SE+AA +DLNRS FH+L++L I+FAK Q+ TWAE W++QWSPE Sbjct: 398 RLDLREKLRVQSEKAALMDLNRSYFFHKLRVLKISFAKLIEKNQENTTWAEDWVLQWSPE 457 Query: 481 VEIQVVESTLLGETIEVAAAYMLREKLQACRSIAEASVLIRIACECGMTAQMEEASRVLQ 540 EI++VE+ L G+TIE A A+ L +++ ++++ + +++ A CGM +E A + LQ Sbjct: 458 TEIEIVETILKGDTIEFATAFELMQRINNSTTLSQMAEVVKDAFYCGMPKALERAFQALQ 517 Query: 541 GLAVDSRDVVGIAAAARELATIIGFGDIRRVDXXXXXXXXXXXFRRGCLFLPDASGCNDE 600 V IA L+ ++ +GDIR+++ F R CL LP S C++E Sbjct: 518 NCISGDIPVDEIARTMFTLSLMLRYGDIRKLNMEVLIPILEQLFLRVCLMLPSESACDNE 577 Query: 601 AAGQMIVAMNELNAISLDHSETVDEALWLQELLHLSERDDRNPRLSGFACAILMERGXXX 660 AA + ++ L+ + +H + +D W L +++RDD N ++SG A AIL+E G Sbjct: 578 AAETLSESIIILHNVVENH-DFLDRERWYNLLTEIAKRDDLNTKISGLAMAILLESGKVD 636 Query: 661 XXXXXXXXXRRLSPGIPADLGAGWFEGLSMRNRYGLLSRMSLWEQLNDYINALEDDEFKR 720 RRLS GI A+LGA WFEGLSM+N Y L++R+ LWE+L +YI+ L+++EFKR Sbjct: 637 NDVLGQEVERRLSKGILAELGATWFEGLSMKNHYTLIARLGLWEKLQNYISDLDEEEFKR 696 Query: 721 ALVFLRRAFGTFSPREKTMISELLGELWGVDTEQAAEILTGELKEEE 767 AL+FLRRAF FS EK I+E + E+WG++ + + ++ +L+++E Sbjct: 697 ALLFLRRAFADFSSNEKHDIAENIAEIWGLNKYEVSAVVNKDLEKDE 743 >ref|NP_812820.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] gb|AAO79014.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] Length = 742 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 220/747 (29%), Positives = 356/747 (47%), Gaps = 63/747 (8%) Query: 8 GVHIFGVRHLSPGGAKHLLEYLNELQPTAVLIEGPSDATDEIRHLTHRSTKPPVAILAFT 67 +H+ G+RH PG +++L YL ELQP +L+EGP++A + + + PPVA+LA+ Sbjct: 2 AIHLLGIRHHGPGSCRNVLNYLQELQPDLILVEGPAEAEALLPCVENPQMTPPVALLAYQ 61 Query: 68 EDLPVRTALWPLAVYSPEYQGMKWARDNGAEAAFIDLPSSVTLSLQDAVRRDGISGREEV 127 D P +P A +SPE+Q +++A N F DLP +L+L R + +E Sbjct: 62 PDEPQNAVFYPFAEFSPEWQAIRYAVQNRIPFRFFDLPLIYSLAL-----RTQKTSEQET 116 Query: 128 KPEADEAGRLFTEEVKEQESVYSRIARLAGEHDYDMYWERNYEHNAN-AGAYRAAILSFS 186 + T EV E + +A AG D + +WE EH A ++A + + Sbjct: 117 ET---------TAEVAEAGDPFDWLAHAAGFTDGESWWETMIEHRQEPADIFQAVQEAVT 167 Query: 187 AEMRLLSESREQQEQPKEHAYNALREAYMRRQIRETIAAGHAPDKIVVICGAYHASALAD 246 A L E P+ + +REA+MR+ IR A ++IVV+CGA+H AL D Sbjct: 168 A----LREELPGHTSPR----DLIREAWMRKMIRA--AQKENFERIVVVCGAWHVPALDD 217 Query: 247 LSDVLNDKE-LEGLPSRSTKLTLMPYSYYKLSTMSGYGAGNEAPQYFEMMWETMAAGRPE 305 + V +D E L+GLP + T +P++Y +L+ SGYGAG E+P ++ +W PE Sbjct: 218 MPKVKDDNELLKGLPKVKVECTWIPWTYDRLAFRSGYGAGIESPGWYHYLWH-----HPE 272 Query: 306 ELAHLYLSTVAGHLRSSGTHRSTAEVIEAVRLAESLAALHGGSAPTLRDLRDAAQTLLGH 365 + L++S +A LR S A VIE VRLA+ AAL P+L + +A T++G Sbjct: 273 DDGTLWVSRIASLLRQKNMDISVAHVIETVRLAQVTAALRDLPYPSLNEYNEAVTTVMGF 332 Query: 366 GE---LSVIADALARVDVGTAIGHLADGVSQTPIQDDXXXXXXXXXXXXXXSTVATELPL 422 G+ L +I + L + +G + D V + P+ D EL L Sbjct: 333 GDDILLQIIKEELI---ISNRLGSVPDDVPKVPLLVDVEKIQKRLRVPFTAEI--KELIL 387 Query: 423 DLRENRRVSSEEAAYLDLNRSMLFHRLKLLGITFAK-NRPSGQDAATWAEYWIIQWSPEV 481 DLR+ DL RS+ FHRL+LLGI + R G+ T+ E W + PE Sbjct: 388 DLRKPN----------DLERSIFFHRLQLLGIDWTILGRIDGK--GTFKEKWTLYHKPEQ 435 Query: 482 EIQVVESTLLGETIEVAAAYMLREKLQACRSIAEASVLIRIACECGMTAQMEEASRVLQG 541 IQ++E + G T+ A L +++ + I E + L+ + A +E + L Sbjct: 436 IIQIIERAIWGNTVMEATQKYLLKQMAEIQHIPELTALLSTVLPADLPALVEAMTVQLDR 495 Query: 542 LAVDSRDVVGIAAAARELATIIGFGDIRRVDXXXXXXXXXXXFRR----GCLFLPDASGC 597 L+ S D++ + A +L I+ +G++R +D R G L Sbjct: 496 LSAASTDILEMMEAVPDLVNIVRYGNVRNLDFSKVGDMLEAMIARILAGGVLV---CINI 552 Query: 598 NDEAAGQMIVAMNELN-AISLDHSETVDEALWLQELLHLSERDDRNPRLSGFACAILMER 656 ++EAAG ++ + + A+S+ + E ++ +W + + + +P LSG+A +L ++ Sbjct: 553 DEEAAGDLLNKLVATDYALSILNREELN-LMWRNFIGQVRSSANVHPLLSGYATRLLNDK 611 Query: 657 GXXXXXXXXXXXXRRLSPG-IPADLGAGWFEGLSMRNRYGLLSRMSLWEQLNDYINALED 715 G S G PAD+ A WFEG + LL LW +N+++ + + Sbjct: 612 GEISAEEMETTLSFYSSVGNAPADM-AYWFEGFLRSSGSILLLDDRLWNLVNNWVCSQDK 670 Query: 716 DEFKRALVFLRRAFGTFSPREKTMISE 742 + F L LRR F F+ E+ + E Sbjct: 671 ETFMELLPVLRRTFSEFTSAERRKLGE 697 >ref|ZP_00057355.1| hypothetical protein [Thermobifida fusca] Length = 735 Score = 274 bits (700), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 228/767 (29%), Positives = 356/767 (46%), Gaps = 79/767 (10%) Query: 9 VHIFGVRHLSPGGAKHLLEYLNELQPTAVLIEGPSDATDEIRHLTHRSTKPPVAILAFTE 68 VH+ G+RH PG A+ + L L+P +LIEGP +A + H+ +PPVA+LA+ + Sbjct: 9 VHLLGIRHHGPGSARAVRAELRRLRPDVILIEGPPEADALLEHVP--GLEPPVALLAYDQ 66 Query: 69 DLPVRTALWPLAVYSPEYQGMKWARDNGAEAAFIDLPSSVTLSLQDAVRRDGISGREEVK 128 P R A+WP AV+SPE+Q +++A +G F DLP++ TL+L + Sbjct: 67 AAPSRAAIWPFAVFSPEWQALRYAAAHGIPVRFCDLPAAHTLALDE-------------- 112 Query: 129 PEADEAGRLFTEEVKEQESVYSRIARLAGEHDYDMYWERNYEHNANAGAYRAAILSFSAE 188 P+ D EE + + S +A AG D + +W+ E + G F A Sbjct: 113 PDTDH------EESRVRVDPLSVLAEAAGYDDAERWWDDVIEQRRDGGPS-----PFPAI 161 Query: 189 MRLLSESREQQEQPKEHAYNALREAYMRRQIRETIAAGHAPDKIVVICGAYHASALADLS 248 + R + E A REA+MR+ +R T+ AG+ ++I V+CGA+H AL DL Sbjct: 162 AEAMVAVRAELAPDPETEREARREAHMRKVLRATLRAGY--ERIAVVCGAWHVPALLDLP 219 Query: 249 DVLND-KELEGLPSRSTKLTLMPYSYYKLSTMSGYGAGNEAPQYFEMMWETMAAGRPEEL 307 D + L GL T +P+++ +L+ +GY AG +P ++ ++ P+ Sbjct: 220 PATADTRLLRGLAKTKVAATWIPWTHGRLAAATGYRAGVRSPGWYHHLFTV-----PDRP 274 Query: 308 AHLYLSTVAGHLRSSGTHRSTAEVIEAVRLAESLAALHGGSAPTLRDLRDAAQTLLGHG- 366 +L+ A LR + S++ VIEAVRL E+LAAL G P L ++ DA +L G Sbjct: 275 VERWLTEAARQLRDNDQPVSSSHVIEAVRLCEALAALRGRPLPGLEEIADATSAVLCEGA 334 Query: 367 --ELSVIADALARVDVGTAIGHLADGVSQTPIQDDXXXXXXXXXXXXXXSTVATELPLDL 424 ++ DA+ VG +G + P+Q D + EL LDL Sbjct: 335 ELRARLVHDAMV---VGERLGTVPPTTPTVPLQRD--LALHQKRLRLKPEALERELVLDL 389 Query: 425 RENRRVSSEEAAYLDLNRSMLFHRLKLLGITFA-KNRPSGQDAATWAEYWIIQWSPEVEI 483 RE R D RS L HRL LLGI + + R S + T+ E W ++W PE +I Sbjct: 390 REER----------DRERSALLHRLNLLGIPWGTRTRDSVRSRGTFRETWTLRWEPEYDI 439 Query: 484 QVVESTLLGETIEVAAAYMLREKLQ-----ACRSIAEASVLIRIA-CECGMTAQMEEASR 537 V+E++ G T+ AA + ++ Q S+ E S+L + G AQ+ + Sbjct: 440 AVIEASRWGTTVTAAATACVHDRAQHADLPTLTSLLEDSLLADLPEAVTGTVAQLAQR-- 497 Query: 538 VLQGLAVDSRDVVGIAAAARELATIIGFGDIRRVDXXXXXXXXXXXFRRGCLFLPDA-SG 596 A + D+ + A LA +G++RR D R C L A +G Sbjct: 498 -----AAEDTDIQRLMRALPPLARSARYGNVRRFDAKALRTIATELLSRICAGLALAVTG 552 Query: 597 CNDEAAGQMIVAMNELN-AISLDHSETVDEALWLQELLHLSERDDRNPRLSGFACAILME 655 +D+AA + ++ + A+ L + E WL L ++ R++ R+SG IL + Sbjct: 553 LSDDAATAVTTDIDTTHTAVILLGGDA--ETEWLDTLEAVAPRENIPGRISGRIHRILYD 610 Query: 656 RGXXXXXXXXXXXXRRLSPGIPADLGAGWFEGLSMRNRYGLLSRMSLWEQLNDYINALED 715 G + SPG P D A W EG N L+ +L ++ ++ +L + Sbjct: 611 SGRLTADTLHQRLSQISSPGTPPDRTAAWIEGFVANNGLLLVHDTALLTLIDRWLTSLNE 670 Query: 716 DEFKRALVFLRRAFGTFSPREKTMISE--LLGELWG------VDTEQ 754 F L LRR FG+F P E+ I++ + G L G VDT+Q Sbjct: 671 SAFITVLPLLRRTFGSFQPAERRAIAQHVIHGSLDGHTPDQPVDTQQ 717 >ref|NP_824633.1| hypothetical protein [Streptomyces avermitilis MA-4680] dbj|BAC71168.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 808 Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 220/754 (29%), Positives = 336/754 (44%), Gaps = 55/754 (7%) Query: 11 IFGVRHLSPGGAKHLLEYLNELQPTAVLIEGPSDATDEIRHLTHRSTKPPVAILAFTEDL 70 + GVRH PG A+ + L +P AVLIEGP +A I +PPVA+LA + Sbjct: 32 LLGVRHHGPGSARAVRAALEAARPRAVLIEGPPEADALIPLAGDEEMRPPVALLAHAVEE 91 Query: 71 PVRTALWPLAVYSPEYQGMKWARDNGAEAAFIDLPSSVTLSLQDAVRRDGISGREEVKPE 130 P R+A WPLA +SPE+ ++W+ ++G A FIDLP++ TL+ + + + +E + Sbjct: 92 PGRSAFWPLAEFSPEWVAIRWSLEHGVPARFIDLPATHTLAWD---KEEPAAEKEPLPQP 148 Query: 131 ADEAGRLFTEEVKEQESVYSRIARLAGEHDYDMYWERNYEHNANAGAYRAAILSFSAEMR 190 DEA R+ V +A AG D + +WE EH G A M Sbjct: 149 VDEAVRVDPLAV---------LAEAAGYDDPERWWEDVVEHRGTGGDVFAPFTVLEEAMG 199 Query: 191 LLSESREQQEQPKEHAYNALREAYMRRQIRETIAAGHAPDKIVVICGAYHASALADLSDV 250 L E+ H + +REAYMR Q+R A D + V+CGA+H AL + V Sbjct: 200 ALREAYGT----GGHERDLVREAYMRLQVR--AAQREFGDDVAVVCGAWHVPALRRKATV 253 Query: 251 LNDKE-LEGLPSRSTKLTLMPYSYYKLSTMSGYGAGNEAPQYFEMMWETMAAGRPEELAH 309 D+ L+GLP T +T +P+++ +L+ SGYGAG ++P ++ ++ G P+ Sbjct: 254 AADRALLKGLPKVKTDMTWVPWTHRRLARASGYGAGIDSPGWYGHLF-----GVPDRPVE 308 Query: 310 LYLSTVAGHLRSSGTHRSTAEVIEAVRLAESLAALHGGSAPTLRDLRDAAQTLLGHGELS 369 +L+ VAG LR S+A VIEAVRLAE+LA + G P L + DA + ++ G Sbjct: 309 RWLTKVAGLLREEDRIVSSAHVIEAVRLAETLAVMRGRPLPGLTETTDAVRAVMCEGSDV 368 Query: 370 VIADALARVDVGTAIGHLADGVSQTPIQDDXXXXXXXXXXXXXXSTVATELPLDLRENRR 429 +A R+ VG +G + + P+Q + E+ LDLR+ Sbjct: 369 PLALVHDRLVVGDVLGEVPESAPAVPLQ--RDLTRLQRRLRLKPEPLEREVELDLRKE-- 424 Query: 430 VSSEEAAYLDLNRSMLFHRLKLLGITFAKNRPSGQDAATWAEYWIIQWSPEVEIQVVEST 489 D RS L HRL+LL + + + S T+ E W ++W PE+ ++V E+ Sbjct: 425 --------TDAERSRLLHRLRLLRVAWGEPAASRGSTGTFRETWRLRWEPELSVRVAEAG 476 Query: 490 LLGETIEVAAAYMLREKLQACRSIAEASVLIRIACECGMTAQMEEASRVLQGLAVDSRDV 549 + G T+ AA A +++AE + L G+ + RVL A DV Sbjct: 477 VWGTTVLAAATAKAEADAVAAQALAEVTALAERCLPAGLPGALPVVMRVLADRAALDTDV 536 Query: 550 VGIAAAARELATIIGFGDIRRVDXXXXXXXXXXXFRRGCLFLPDA-SGCNDEAAGQMIVA 608 +A A L + +GD+R D R + LP A + EAA +M Sbjct: 537 GHLAQALPALVRSLRYGDVRGTDTKALAGVATGLAERVFVGLPPACAALGTEAAEEMRRH 596 Query: 609 MNELN-AISLDHSETV----DEA----------LWLQELLHLSERDDRNPRLSGFACAIL 653 ++ ++ A+ L T DE W L LS RD + G A +L Sbjct: 597 VDAVHGAVGLLGEGTAARQGDEGSGQGGTGIRERWHSVLRVLSGRDTVPGVIRGRAVRLL 656 Query: 654 MERGXXXXXXXXXXXXRRLSPGIPADLGAGWFEGLSMRNRYG---LLSRMSLWEQLNDYI 710 ++ G LSPG A W EG G L+ L ++ ++ Sbjct: 657 LDDGALAQDEAARLMGLVLSPGTAPGDAAAWIEGFVGGGSGGGMLLVHDERLLGLVDAWL 716 Query: 711 NALEDDEFKRALVFLRRAFGTFSPREKTMISELL 744 + + F L LRR F + P + + EL+ Sbjct: 717 TGVPAEAFTDVLPLLRRTFSAYEPGVRRTLGELV 750 >ref|NP_628961.1| conserved hypothetical protein SCD63A.15 [Streptomyces coelicolor A3(2)] emb|CAB92667.1| conserved hypothetical protein SCD63A.15 [Streptomyces coelicolor A3(2)] Length = 815 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 222/759 (29%), Positives = 331/759 (43%), Gaps = 51/759 (6%) Query: 11 IFGVRHLSPGGAKHLLEYLNELQPTAVLIEGPSDATDEIRHLTHRSTKPPVAILAFTEDL 70 + GVRH PG A+ + L +P VLIEGP +A I +PPVA+LA D Sbjct: 27 LLGVRHHGPGSARAVRAALEATRPGVVLIEGPPEADALIPLAADEDMRPPVALLAHAVDE 86 Query: 71 PVRTALWPLAVYSPEYQGMKWARDNGAEAAFIDLPSSVTLSLQDAVRRDGISGREEVKPE 130 P R+A WPLA +SPE+ ++WA ++ A FIDLP++ TL+ + A G +V + Sbjct: 87 PGRSAFWPLAEFSPEWVAVRWALEHDVPARFIDLPAAHTLAWRAA------DGHGDVDAD 140 Query: 131 A---DEA--GRLFTEEVKEQESVYSRIARLAGEHDYDMYWERNYEHNA-NAGAYRAAILS 184 A D+A GR T + + +A AG D + +WE EH AG A + Sbjct: 141 ARGDDQAPPGRPGTAPADVRRDPLAALAAAAGHDDPERWWEDVIEHRGRGAGDALAPFTA 200 Query: 185 FSAEMRLL--------SESREQQEQPKEHAYNALREAYMRRQIRETIAAGHAPDKIVVIC 236 M L +E E +E + +REA+MR Q+R A + + V+C Sbjct: 201 LEEAMTALRETEEDGEAEGGEDREGGDGDVRDLVREAHMRLQVRA--ARREFAEGVAVVC 258 Query: 237 GAYHASALADLSDVLNDKE-LEGLPSRSTKLTLMPYSYYKLSTMSGYGAGNEAPQYFEMM 295 GA+H AL + V D+ L+GLP +T +P+++ +LS GYGAG E+P ++ + Sbjct: 259 GAWHVPALRRRATVAADRALLKGLPRTKVDMTWVPWTHRRLSRAGGYGAGIESPGWYGHL 318 Query: 296 WETMAAGRPEELAHLYLSTVAGHLRSSGTHRSTAEVIEAVRLAESLAALHGGSAPTLRDL 355 + A RP E +L+ VAG LR+ S A VIEA RLAE+LA + G P L + Sbjct: 319 F--AAVDRPVE---RWLTKVAGLLRAEDRIVSPAHVIEATRLAETLAVIRGRPLPGLTEA 373 Query: 356 RDAAQTLLGHGELSVIADALARVDVGTAIGHLADGVSQTPIQDDXXXXXXXXXXXXXXST 415 DA + ++ G +A R+ VG +G + G P+Q D Sbjct: 374 TDAVRAVMCDGSDVPLALVHDRLVVGDVLGEVPAGAPAVPLQRDLTRAQRRLRLRPEAPV 433 Query: 416 VATELPLDLRENRRVSSEEAAYLDLNRSMLFHRLKLLGITFAKNRPSGQDAATWAEYWII 475 EL LDLR+ D RS L HRL+LLG+ + + S + T+ E W + Sbjct: 434 --RELELDLRKE----------TDAGRSRLLHRLRLLGVGWGEAVAS-RSTGTFREAWRL 480 Query: 476 QWSPEVEIQVVESTLLGETIEVAAAYMLREKLQACRSIAEASVLIRIACECGMTAQMEEA 535 +W PE+ ++V E+ + G T+ AA + R +AE + L + + Sbjct: 481 RWEPELSVRVAEAGVWGTTVLSAATARAQADAVTARGLAEVTALAERCLLAELPDALAPV 540 Query: 536 SRVLQGLAVDSRDVVGIAAAARELATIIGFGDIRRVDXXXXXXXXXXXFRRGCLFLP--- 592 R+L A DV +A A L + +GD+R D R + LP Sbjct: 541 MRILADRAALDTDVGHLAQALPALVRSLRYGDVRGTDTRALAEVAEGLAERVFVGLPAAC 600 Query: 593 -DASGCNDEAAGQMIVAMNELNAISLDHSETVDEAL---WLQELLHLSERDDRNPRLSGF 648 E + + A++ + D L W L LS RD + G Sbjct: 601 AALDADAAEEMRRHVDAVHTAVGLLGDAPAPGRGDLHSRWRAVLHTLSARDTVPGVVRGR 660 Query: 649 ACAILMERGXXXXXXXXXXXXRRLSPGIPADLGAGWFEGLSMRNRYG---LLSRMSLWEQ 705 A +L++ G LSP P A W EG G LL L Sbjct: 661 AVRLLLDDGELAPAEAARLMGLVLSPATPPADAAAWIEGFVGGGSGGGMLLLHDERLLAL 720 Query: 706 LNDYINALEDDEFKRALVFLRRAFGTFSPREKTMISELL 744 ++ ++ + D F L LRR F + P + + EL+ Sbjct: 721 VDAWLTGVPADAFTHVLPLLRRTFSAYEPGVRRGLGELV 759 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.132 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,016,957,259 Number of extensions: 39015518 Number of successful extensions: 97576 Number of sequences better than 1.0e-05: 19 Number of HSP's gapped: 97511 Number of HSP's successfully gapped: 21 Length of query: 782 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 648 Effective length of database: 393,414,312 Effective search space: 254932474176 Effective search space used: 254932474176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)