BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0027.p (109 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_346669.1| Aspartate-semialdehyde dehydrogenase [Clostridi... 111 5e-24 ref|NP_347207.1| Aspartate semialdehyde dehydrogenase (gene asd)... 110 1e-23 ref|YP_003650.1| aspartate beta-semialdehyde dehydrogenase [Lept... 84 1e-15 ref|NP_714899.1| aspartate-semialdehyde dehydrogenase [Leptospir... 84 1e-15 ref|ZP_00121368.1| COG0136: Aspartate-semialdehyde dehydrogenase... 82 4e-15 >ref|NP_346669.1| Aspartate-semialdehyde dehydrogenase [Clostridium acetobutylicum] pir||F96902 aspartate-semialdehyde dehydrogenase [imported] - Clostridium acetobutylicum gb|AAK78009.1| Aspartate-semialdehyde dehydrogenase [Clostridium acetobutylicum] Length = 360 Score = 111 bits (278), Expect = 5e-24, Method: Composition-based stats. Identities = 49/84 (58%), Positives = 65/84 (77%) Query: 1 VTDEGIVKSEQPVITTQCIRVPVADGHMAAVFASFEQKPSKEEILERWNSFQGRPQALGL 60 + + IV + P+ITTQCIRVPV DGH+AAVF +F+ KPSK+EI++ W +F+ AL L Sbjct: 224 IENNKIVNASSPLITTQCIRVPVTDGHLAAVFVNFKTKPSKQEIIDAWENFKAPECALNL 283 Query: 61 PSAPKQFITYFAEENRPQTQLDRD 84 PSAPK+F+ YF E +RPQT+LDRD Sbjct: 284 PSAPKKFLHYFDEPDRPQTKLDRD 307 >ref|NP_347207.1| Aspartate semialdehyde dehydrogenase (gene asd) [Clostridium acetobutylicum] pir||H96969 aspartate semialdehyde dehydrogenase (gene asd) [imported] - Clostridium acetobutylicum gb|AAK78547.1| Aspartate semialdehyde dehydrogenase (gene asd) [Clostridium acetobutylicum] Length = 359 Score = 110 bits (274), Expect = 1e-23, Method: Composition-based stats. Identities = 48/80 (60%), Positives = 66/80 (82%) Query: 6 IVKSEQPVITTQCIRVPVADGHMAAVFASFEQKPSKEEILERWNSFQGRPQALGLPSAPK 65 IV + P+IT+QCIRV V+DGH+AA F SFE KP+KE+I+E+ +++G+PQ L LP+AP+ Sbjct: 230 IVSKKDPLITSQCIRVAVSDGHLAATFVSFENKPTKEQIVEKLKNYKGKPQLLNLPTAPE 289 Query: 66 QFITYFAEENRPQTQLDRDI 85 QFITYF +E RPQ +LDR+I Sbjct: 290 QFITYFEDEFRPQPKLDRNI 309 >ref|YP_003650.1| aspartate beta-semialdehyde dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] pir||A44846 aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) - Leptospira interrogans gb|AAA25262.1| aspartate beta-semialdehyde dehydrogenase gb|AAB21985.1| aspartate beta-semialdehyde dehydrogenase [Leptospira interrogans] gb|AAS72287.1| aspartate beta-semialdehyde dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 349 Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 37/71 (52%), Positives = 45/71 (63%) Query: 14 ITTQCIRVPVADGHMAAVFASFEQKPSKEEILERWNSFQGRPQALGLPSAPKQFITYFAE 73 I+ C RVPV DGH V F++KPS+EEI+ W F G PQ LGLP AP I + E Sbjct: 228 ISAHCNRVPVFDGHTVCVSVKFKKKPSREEIISSWKDFSGEPQTLGLPLAPNPVILFREE 287 Query: 74 ENRPQTQLDRD 84 E+RPQ +LD D Sbjct: 288 EDRPQPRLDLD 298 >ref|NP_714899.1| aspartate-semialdehyde dehydrogenase [Leptospira interrogans serovar lai str. 56601] sp|P41394|DHAS_LEPIN Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) gb|AAN51914.1| aspartate-semialdehyde dehydrogenase [Leptospira interrogans serovar lai str. 56601] Length = 349 Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 37/71 (52%), Positives = 45/71 (63%) Query: 14 ITTQCIRVPVADGHMAAVFASFEQKPSKEEILERWNSFQGRPQALGLPSAPKQFITYFAE 73 I+ C RVPV DGH V F++KPS+EEI+ W F G PQ LGLP AP I + E Sbjct: 228 ISAHCNRVPVFDGHTVCVSVKFKKKPSREEIISSWKDFSGEPQTLGLPLAPNPVILFREE 287 Query: 74 ENRPQTQLDRD 84 E+RPQ +LD D Sbjct: 288 EDRPQPRLDLD 298 >ref|ZP_00121368.1| COG0136: Aspartate-semialdehyde dehydrogenase [Bifidobacterium longum DJO10A] Length = 364 Score = 82.0 bits (201), Expect = 4e-15, Method: Composition-based stats. Identities = 36/71 (50%), Positives = 50/71 (70%) Query: 14 ITTQCIRVPVADGHMAAVFASFEQKPSKEEILERWNSFQGRPQALGLPSAPKQFITYFAE 73 IT+QCIRVPV +GH A VF +F +K +KEE+++R ++ + L LP APK FI Y E Sbjct: 241 ITSQCIRVPVLNGHTATVFLNFGKKATKEELIDRLANYTSKASELELPHAPKHFIQYLTE 300 Query: 74 ENRPQTQLDRD 84 ++RPQ +LD D Sbjct: 301 DDRPQVKLDVD 311 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 149,006,361 Number of extensions: 5534127 Number of successful extensions: 9159 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 9154 Number of HSP's successfully gapped: 26 Length of query: 109 Length of database: 757,237,578 Length adjustment: 75 Effective length of query: 34 Effective length of database: 553,605,153 Effective search space: 18822575202 Effective search space used: 18822575202 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 120 (50.8 bits)