BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0576.0006.p (632 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_241162.1| PTS system, beta-glucoside-specific enzyme II, ... 456 e-126 ref|NP_464265.1| similar to phosphotransferase system (PTS) beta... 449 e-124 gb|AAS55458.1| BglP [Pectobacterium carotovorum subsp. carotovorum] 438 e-121 sp|P26207|PTBA_ERWCH PTS system, beta-glucoside-specific IIABC c... 408 e-112 ref|NP_816238.1| PTS system, beta-glucoside-specific IIABC compo... 404 e-111 >ref|NP_241162.1| PTS system, beta-glucoside-specific enzyme II, ABC component [Bacillus halodurans] pir||H83686 PTS system, beta-glucoside-specific enzyme II, ABC component BH0296 [imported] - Bacillus halodurans (strain C-125) dbj|BAB04015.1| PTS system, beta-glucoside-specific enzyme II, ABC component [Bacillus halodurans] Length = 630 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 254/640 (39%), Positives = 380/640 (59%), Gaps = 20/640 (3%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M YE++AK I+ ++GGEENV +LVHCATRLRF+L D+ DKE+L +GV++V E+GGQ Sbjct: 1 MNYEQVAKQIIDHVGGEENVKSLVHCATRLRFSLIDHSKADKEQLLKTDGVIAVKENGGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKE--KMMSRIFAVISGSLSPLLPAM 118 FQVV+GN V VY I K S + ++++ +SR+ V++ +PLL M Sbjct: 61 FQVVIGNRVPEVYAAIGKISTILDDTTSTKKGGDTGNSGNFVSRLIDVVASIFTPLLGVM 120 Query: 119 AGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVGG 178 AGAGILK L + T GW+ + TY+IL AA++++FYFLPI L V+A+ KF NP+ Sbjct: 121 AGAGILKGLLAIATNVGWLDSGETTYIILHAASDSMFYFLPILLAVTAARKFETNPFGAA 180 Query: 179 VIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIHK 238 I AL+ P+ L + +F GIPVVLM+Y+STVFP+ +A++ SYVEKF K IH+ Sbjct: 181 TIAGALIYPSIVELHDSAIDVTFFGIPVVLMNYTSTVFPILLAVFAMSYVEKFCNKKIHE 240 Query: 239 ELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFFL 298 ++ F+ T +I GP GVY+GN IA I + S +L GA++ G+ L Sbjct: 241 AVKNFVTPLILLVVIVPVTLIILGPIGVYLGNGIASVIQEIFTFSPVLAGAIVAGIWQVL 300 Query: 299 VVFGLHWGIIPIVLANLA-NGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXX 357 V+FG+HWGIIPI+L NL+ G D I A+ A + F+ AG AL V L++K K LK++AG Sbjct: 301 VIFGIHWGIIPIILNNLSVRGEDVIKAVAAPAVFSQAGAALGVMLRTKNKKLKALAGSTS 360 Query: 358 XXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSIGAFE 417 G++EP VYG+ L K+ + + A A + +I F Sbjct: 361 ITALF-GITEPAVYGVTLPLKKPFIMAVISAAVGGAIVGHYGSVAVAPGAPGLLTIPIFY 419 Query: 418 P---VGY--YXXXXXXXXXXXXXXTVLLGYQDKKKSE-AVTEISNTAPAVEKKAVQPGGS 471 P G+ + T ++G++D E ++ S + V+++ Sbjct: 420 PEDGRGFVAFVIAIIISFVLAAVLTYIVGFKDPVDDEDTLSNESGSENEVKRE------- 472 Query: 472 TPASNKASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTV 531 +K S E + SPL GE+ LT+V D F+ GAMGKG+A+ P G+ V+P+NGTV Sbjct: 473 ---DDKKEPSASEEIKSPLKGEVVPLTEVQDHVFSSGAMGKGVAVRPKEGRLVAPINGTV 529 Query: 532 GTILKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKI 591 ++ ++ HA+ + S++G EI IH+GI+TVQLKG++FT ++ GD V GDVL+EF++E+I Sbjct: 530 TSLFETKHAIGITSDNGTEIFIHVGIDTVQLKGEHFTSFIEQGDEVAAGDVLLEFDVERI 589 Query: 592 KEAGYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 AGY+ ITP++I+N + +V T VT++D L+ ++ Sbjct: 590 TAAGYDVITPVLITNAKQFSNVQTTDKREVTSEDLLIHVI 629 >ref|NP_464265.1| similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC component [Listeria monocytogenes EGD-e] pir||AB1167 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC component homolog lmo0738 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC98816.1| lmo0738 [Listeria monocytogenes] Length = 617 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 250/638 (39%), Positives = 370/638 (57%), Gaps = 27/638 (4%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M Y++LAK+I+ N+GGEENV ++VHCATRLRF L + + DK++++S+ GV+SVVE+ GQ Sbjct: 1 MDYQKLAKEILANVGGEENVRSVVHCATRLRFKLVNKEKADKKQIESISGVISVVENAGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKE---KMMSRIFAVISGSLSPLLPA 117 QV++GN V VY+ + +KL + SE A K+ +S+ VISG +P+L A Sbjct: 61 LQVIIGNTVGDVYKALGSFTKL-TDDGDSEIAKGTKDSDGNFLSKAIDVISGIFTPILGA 119 Query: 118 MAGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVG 177 +AG G+LK L + TTFGW++ SGTY IL AAA++VFYFLP+ L +A+ KFGANP V Sbjct: 120 LAGGGMLKGLLMILTTFGWLTESSGTYQILYAAADSVFYFLPLILAYTAARKFGANPPVA 179 Query: 178 GVIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIH 237 AL+ P L G +FL IPVVLM YS +V P+ +A+W S +E+FL IH Sbjct: 180 IAAAGALVYPTMINLFNEGAHITFLQIPVVLMSYSFSVIPIILAVWFLSILERFLNSKIH 239 Query: 238 KELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFF 297 + +TF+ T + FGP G +I +A ++ +S ++ GA +G Sbjct: 240 EAAKTFLTPMICLMLIVPLTFLAFGPLGTFISQGLASGYTFIYNLSPIVAGAFMGAFWQV 299 Query: 298 LVVFGLHWGIIPIVLANLAN-GTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXX 356 LV+FG+HWG +PI++ NL+ G D ++AM SNFA AG +L VFLK+K+ +K+IAG Sbjct: 300 LVIFGIHWGFVPIMINNLSRYGRDTMIAMVGPSNFAQAGASLGVFLKTKKPEVKAIAGSA 359 Query: 357 XXXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSIGAF 416 G++EP++YG+ L++K+ + A I ++ F Sbjct: 360 ALTGFF-GITEPSIYGVTLKYKKPFVIASIAGAIGGAIVGAAGSSGAANAIPGILTLPIF 418 Query: 417 EPVGY--YXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGSTPA 474 G+ + T GY+D E+++ K+A + G Sbjct: 419 IGKGFVGFILGIAVAYILSAIGTYFFGYKD--------EMADGIAPTTKEAKETG----- 465 Query: 475 SNKASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTVGTI 534 + EV++SP+ G + L +V D AF+ G +GKG+AI+P G+ +SPVNGT+ T Sbjct: 466 ------VEAEVIVSPIRGNIVPLNEVKDEAFSAGLLGKGVAIVPQEGKLISPVNGTIETA 519 Query: 535 LKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKIKEA 594 +GHA+ + S+ G EIL+H+G +TVQL G+YF V GD V G L+EF+LE IK Sbjct: 520 FPTGHAIGIRSDKGVEILLHVGFDTVQLNGKYFKLLVAQGDRVLVGQALLEFDLEAIKAD 579 Query: 595 GYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLVV 632 GY+ TPI+++NT YLDV+ + TV +D LLT V+ Sbjct: 580 GYDITTPIVVTNTDAYLDVLISDQKTVNYEDTLLTPVL 617 >gb|AAS55458.1| BglP [Pectobacterium carotovorum subsp. carotovorum] Length = 633 Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust. Identities = 248/643 (38%), Positives = 365/643 (56%), Gaps = 23/643 (3%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M+Y+ LA +I+ +GG NV +++HCATRLRF LKDN+ D LK GV+ VVESGGQ Sbjct: 1 MEYKALASEILDGVGGRGNVISVMHCATRLRFKLKDNKKADAATLKDNSGVIMVVESGGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSAS--EDANQPKEKMMSRIFAVISGSLSPLLPAM 118 FQVVVGN V+ VY ++ S L ++ ED + K + SR +ISG +PL+ M Sbjct: 61 FQVVVGNHVSDVYNSLLDISGLTDRTDSANHEDGEEKKGNIFSRFIDIISGIFTPLIGVM 120 Query: 119 AGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVGG 178 A +GILK FL L GW+ SGTY +L AA++A+F+F P+ LG +A KFG NP+V Sbjct: 121 AASGILKGFLALSLACGWMVETSGTYKVLFAASDALFFFFPVVLGYTAGKKFGGNPFVTM 180 Query: 179 VIGAALMEPNFT---GLLANGDTSS--FLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLK 233 VIGA L+ P+ G + N FLGIP+ ++Y+S+V P+ + W+ S +EK L Sbjct: 181 VIGATLVHPSMISEFGAMQNTGYQQLYFLGIPITFINYASSVIPIIFSAWLASRLEKPLN 240 Query: 234 KIIHKELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGG 293 I+H ++ F T ++ GP ++G+ +A + G++ ++ GA++G Sbjct: 241 AILHINIRNFFTPLLCLCITVPVTFLLIGPAATWLGHMLASGYQLIYGLNSMIAGALMGA 300 Query: 294 LIFFLVVFGLHWGIIPIVLANLAN-GTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSI 352 L V+FGLHWG+ P+++ NL+ G D ++ + + AG L V L++++ LK I Sbjct: 301 LWQVFVIFGLHWGLTPLMINNLSVLGHDTMMPLLVPAVLGQAGAVLGVLLRTRDMKLKGI 360 Query: 353 AGXXXXXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFS 412 +G G++EP VYG+ L KR + FHT +F F +IF+ Sbjct: 361 SGSAFSAAIF-GITEPAVYGVTLPLKRPFIFGCVGGAMGAAILGYFHTTIYSFGFPSIFT 419 Query: 413 I-GAFEPVGYYXXXXXXXXXXXXXXTV---LLGYQDKKKSEAVTEISNTAPAVEKKAVQP 468 P G + +G EA EI NT+ A + Sbjct: 420 FTQVIPPTGVDNTVWAAIIGTVIALPLPPPRVGPSGIPSQEATKEI-NTSTATPQA---- 474 Query: 469 GGSTPASNKASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVN 528 ++ T++K+ + SP+ G + L QV D FA G MGKGIAI P G+ VSPV+ Sbjct: 475 -----IPRQSDTTRKQEISSPIAGTVLPLEQVGDETFASGLMGKGIAIKPQAGRVVSPVS 529 Query: 529 GTVGTILKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFEL 588 GTV ++ K+ HA+ L SE GAE+LIH+GI+TV+L GQYFT +K GD V+ GD+L+EF+ Sbjct: 530 GTVASLFKTNHAIGLESEEGAEVLIHVGIDTVKLDGQYFTAHIKTGDVVKQGDLLVEFDY 589 Query: 589 EKIKEAGYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 + I++AGY+ TP+II+N+ DY+DV+ T TV Q LLTL+ Sbjct: 590 QAIEKAGYDTTTPVIITNSXDYVDVLPTAGDTVQEQGTLLTLI 632 >sp|P26207|PTBA_ERWCH PTS system, beta-glucoside-specific IIABC component (EIIABC-Bgl) (Beta-glucoside-permease IIABC component) (Phosphotransferase enzyme II, ABC component) (EII-Bgl) pir||B42603 beta-glucoside-specific phosphotransferase system-dependent permease - Erwinia chrysanthemi gb|AAA24814.1| beta-glucoside permease Length = 631 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 243/644 (37%), Positives = 348/644 (54%), Gaps = 25/644 (3%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M YE LA +I +GG+EN+ +++HCATRLRF L+DN + + LK+ G++ VVESGGQ Sbjct: 1 MNYETLASEIRDGVGGQENIISVIHCATRLRFKLRDNTNANADALKNNPGIIMVVESGGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEKMMSRIFAVISGSLSPLLPAMAG 120 FQVVVGN VA VYQ ++ + + ++ + K + S +IS +P + MA Sbjct: 61 FQVVVGNQVADVYQALLSLDGMARFSDSAAPEEEKKNSLFSGFIDIISSIFTPFVGVMAA 120 Query: 121 AGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVGGVI 180 GILK FL L IS SGTY +L AA++A+FYF PI LG +A KFG NP+ VI Sbjct: 121 TGILKGFLALGVATHVISESSGTYKLLFAASDALFYFFPIVLGYTAGKKFGGNPFTTLVI 180 Query: 181 GAALMEPN----FTGLLA-NGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKI 235 GA L+ P+ F + A + T FLGIP+ ++YSS+V P+ A W+ +EK L + Sbjct: 181 GATLVHPSMIAAFNAMQAPDHSTLHFLGIPITFINYSSSVIPILFASWVSCKLEKPLNRW 240 Query: 236 IHKELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLI 295 +H ++ F T ++ GP ++ +A +L G++ LL GAV+G L Sbjct: 241 LHANIRNFFTPLLCIVISVPLTFLLIGPSATWLSQMLAGGYQWLYGLNSLLAGAVMGALW 300 Query: 296 FFLVVFGLHWGIIPIVLANLAN-GTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAG 354 V+FGLHWG +P++L N + G D +L + + AG L V L++++ K IAG Sbjct: 301 QVCVIFGLHWGFVPLMLNNFSVIGHDTLLPLLVPAVLGQAGATLGVLLRTQDLKRKGIAG 360 Query: 355 XXXXXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSIG 414 G++EP VYG+ L +R + HT +F F +IFS Sbjct: 361 SAFSAAIF-GITEPAVYGVTLPLRRPFIFGCIGGALGAAVMGYAHTTMYSFGFPSIFSFT 419 Query: 415 AFEPVGYYXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGS-TP 473 P LL + A +++ + V K QP + +P Sbjct: 420 QVIP-----PTGVDSSVWAAVIGTLLAF-------AFAALTSWSFGVPKDETQPAAADSP 467 Query: 474 A-----SNKASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVN 528 A A + E L SPL GE+ L QV D FA G MGKGIAI P+ G+ +PV+ Sbjct: 468 AVLAETQANAGAVRDETLFSPLAGEVLLLEQVADRTFASGVMGKGIAIRPTQGRLYAPVD 527 Query: 529 GTVGTILKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFEL 588 GTV ++ K+ HA+ L S GAE+LIH+GI+TV+L G+YFTP V+ GD VR GD+L+EF+ Sbjct: 528 GTVASLFKTHHAIGLASRGGAEVLIHVGIDTVRLDGRYFTPHVRVGDVVRQGDLLLEFDG 587 Query: 589 EKIKEAGYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLVV 632 I+ AGY+ TPI+I+N+ DY V + V A L LV Sbjct: 588 PAIEAAGYDLTTPIVITNSEDYRGVEPVASGKVDANAPLTQLVC 631 >ref|NP_816238.1| PTS system, beta-glucoside-specific IIABC component [Enterococcus faecalis V583] gb|AAO82308.1| PTS system, beta-glucoside-specific IIABC component [Enterococcus faecalis V583] Length = 626 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 233/640 (36%), Positives = 348/640 (54%), Gaps = 27/640 (4%) Query: 2 KYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQF 61 K + +A +++ +GGE NV ++VHCATRLRF LKD D L + V+ VV+S GQ+ Sbjct: 3 KNQEIAARVLKAVGGEGNVNSVVHCATRLRFKLKDENKADTAALNADPDVIQVVQSAGQY 62 Query: 62 QVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEKMMSRIFAVISGSLSPLLPAMAGA 121 QVV+G+ V+ VY+++M NS G GN + + + +R+ +IS +P L AMAGA Sbjct: 63 QVVIGSHVSDVYKDLMANS--GLGNDSDNREKESGGNIFNRLIDIISSIFTPFLGAMAGA 120 Query: 122 GILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVGGVIG 181 G+LK FLTL T GW++ SG YL+L + A+ +F FLPI L +A+ KF NP++ + Sbjct: 121 GVLKGFLTLAVTMGWLADTSGVYLVLFSIADGLFTFLPIMLAFTAAKKFNTNPFLAVALA 180 Query: 182 AALMEPNFTGLLANGDTSSFLGIPVVL--MDYSSTVFPVFVAIWIFSYVEKFLKKIIHKE 239 AL+ P+ T L G T SF G+PV++ Y+S+V P+ +A++ SYVE+F KK+I Sbjct: 181 MALVHPSITAL--AGKTISFAGLPVIIGPSGYTSSVLPIILAVFAQSYVERFFKKVIPSF 238 Query: 240 LQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFFLV 299 LQ T + GP G IG+ + N + S ++ G ++G L LV Sbjct: 239 LQIICVPLAVFLIMAPVTFLAIGPIGTVIGDWLGQGYNAIYAFSPIIAGLLMGSLWQVLV 298 Query: 300 VFGLHWGIIPIVLANLANGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXXXX 359 +FG+HWG +PI++ NL G D ++ M + A G ALAVF +K LK +A Sbjct: 299 MFGMHWGFVPIMMLNLTQGGDTMVPMLLPAVIAQGGAALAVFFLTKNVKLKGLA-LSSSI 357 Query: 360 XXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSIGAFEPV 419 G++EPTVYG+ L K+ H F ++ S+ F P Sbjct: 358 TTIFGITEPTVYGVTLPLKKPFIAACIGGGIGGAFVAMNHVKNFTFGLVSMLSLPGFIPA 417 Query: 420 GYYXXXXXXXXX--------XXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGS 471 T +L ++D+ E TE + T K V P Sbjct: 418 ETKDTAPMITGAIGAGIAFIIAFVLTFVLRFEDQPNPETATEKTET-----DKMVAP--- 469 Query: 472 TPASNKASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTV 531 K + K +L SPL GE+ L +V DP FA GA+GKG+AI P+ G+ +P +G + Sbjct: 470 ----VKTNQEDKIILASPLQGEILPLEKVQDPVFASGALGKGVAIEPTEGKLYAPADGEI 525 Query: 532 GTILKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKI 591 T+ +GHAV L + G E+L+HIG++TV+L G+ F VK GD V+ GD+L+ F++ I Sbjct: 526 TTLFPTGHAVGLTTTEGVELLMHIGMDTVELDGKGFELSVKQGDSVKKGDLLVTFDIAAI 585 Query: 592 KEAGYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 KEAGY +TPI+++NT DYLDV++ + V + L ++ Sbjct: 586 KEAGYPVVTPIVVTNTNDYLDVLDMNQTDVLHGEDFLAII 625 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.137 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 846,993,316 Number of extensions: 34754938 Number of successful extensions: 114838 Number of sequences better than 1.0e-05: 396 Number of HSP's gapped: 114024 Number of HSP's successfully gapped: 483 Length of query: 632 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 500 Effective length of database: 398,844,510 Effective search space: 199422255000 Effective search space used: 199422255000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)