BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0574.0009.p (311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_388705.1| similar to hypothetical proteins from B. subtil... 284 2e-75 ref|NP_244171.1| BH3305~unknown conserved protein [Bacillus halo... 228 2e-58 ref|NP_980734.1| glyoxalase family protein [Bacillus cereus ATCC... 215 1e-54 ref|NP_691363.1| hypothetical protein OB0442 [Oceanobacillus ihe... 214 1e-54 ref|NP_834066.1| Glyoxalase family protein [Bacillus cereus ATCC... 213 6e-54 >ref|NP_388705.1| similar to hypothetical proteins from B. subtilis [Bacillus subtilis] sp|P54721|YFIE_BACSU Hypothetical protein yfiE pir||H69802 conserved hypothetical protein yfiE - Bacillus subtilis dbj|BAA09109.1| unknown [Bacillus subtilis] emb|CAB12653.1| yfiE [Bacillus subtilis subsp. subtilis str. 168] Length = 285 Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/270 (51%), Positives = 179/270 (66%), Gaps = 1/270 (0%) Query: 32 QSLEIGLVQLRVSDLERSLAFYQNVVGLKVLRQNGREVEMTADGQHVLLVLREIKNARVL 91 + IG +L + LERSL FY NV+G +VL++ R+ E+TADG+ VLL+L E +A VL Sbjct: 6 EDTHIGYAKLTIRSLERSLQFYCNVIGFQVLKKTDRQAELTADGKRVLLILEENPSAVVL 65 Query: 92 RRNSAAGLYHFAILVPDRPSLGLVLRNLIDSGIHIGQGDHLVSEALYIQDPDNNGIELYR 151 S GLYHFAIL+PDR LG+ L LI+ GI IG GDH VSEALY+ DPD NGIE+Y Sbjct: 66 PELSVTGLYHFAILLPDRKELGIALARLIEHGIAIGHGDHAVSEALYLSDPDGNGIEMYA 125 Query: 152 DRPRDTWKHEANGNVVMTTDPVDVDGLLAASEGLSWTGLPAGTVIGHVHFHVGDIGEAKK 211 DRPR TW+ + GN VMTT VD++GLL + T LP T+IGH+H HV D+ EAK Sbjct: 126 DRPRSTWQRDREGNYVMTTTAVDIEGLLEEAGDERKTSLPNDTIIGHIHLHVSDLKEAKA 185 Query: 212 FYVDTLGFELTAHY-GDAAMFISAGGYHHHMGLNIWXXXXXXXXXXXXXXIDYFTLLLPS 270 FY D LGF++ +Y G +A+F+SAGGYHHH+GLNIW +DY+T++LP Sbjct: 186 FYTDVLGFDIVGNYAGMSALFVSAGGYHHHIGLNIWAGRNAPPKPTNASGLDYYTVVLPH 245 Query: 271 VQERDLAAERVRSAGYRVDEAGGIVTVTDP 300 +E DL A RV+ AGY ++E V DP Sbjct: 246 QEELDLVANRVKHAGYSIEETENSFRVKDP 275 >ref|NP_244171.1| BH3305~unknown conserved protein [Bacillus halodurans] pir||A84063 hypothetical protein BH3305 [imported] - Bacillus halodurans (strain C-125) dbj|BAB07024.1| BH3305~unknown conserved protein [Bacillus halodurans] Length = 286 Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 114/275 (41%), Positives = 168/275 (61%), Gaps = 3/275 (1%) Query: 36 IGLVQLRVSDLERSLAFYQNVVGLKVLRQNGREVEMTADGQHVLLVLREIKNARVLRRNS 95 + LV ++VSDL R+L FYQ ++G +VL ++ R +TA+G+ LLV+ E + + ++ Sbjct: 11 VDLVNIKVSDLSRALTFYQEIIGFQVLERSERSATLTANGRTPLLVI-EQPDPVIAKQPR 69 Query: 96 AAGLYHFAILVPDRPSLGLVLRNLIDSGIHI-GQGDHLVSEALYIQDPDNNGIELYRDRP 154 GLYHFA+L+P R LG L +L+ SG + G DHLVSEA+Y DPD NG+E+Y DRP Sbjct: 70 TTGLYHFALLLPSRADLGRFLNHLLQSGYPLQGASDHLVSEAIYFADPDGNGVEVYADRP 129 Query: 155 RDTWKHEANGNVVMTTDPVDVDGLLAASEGLSWTGLPAGTVIGHVHFHVGDIGEAKKFYV 214 +W +NG V M+T+P+ + LLA + WT LP T++GH+H HV ++ EA+ FY+ Sbjct: 130 SSSWDW-SNGEVKMSTEPIHAENLLAEGKDEPWTALPPETILGHIHLHVANLFEAETFYI 188 Query: 215 DTLGFELTAHYGDAAMFISAGGYHHHMGLNIWXXXXXXXXXXXXXXIDYFTLLLPSVQER 274 + LGF + A G+ A+FIS G YHHH+GLN W + +F+L PS + R Sbjct: 189 EGLGFNVVARLGNQALFISTGNYHHHIGLNTWNGVGAPTPPEHSVGLKWFSLTYPSEEVR 248 Query: 275 DLAAERVRSAGYRVDEAGGIVTVTDPWNIGIQLLV 309 R+ + G++V+ G V DP I+LLV Sbjct: 249 AKTVNRLETIGFQVERKHGEEWVIDPSGNHIRLLV 283 >ref|NP_980734.1| glyoxalase family protein [Bacillus cereus ATCC 10987] gb|AAS43342.1| glyoxalase family protein [Bacillus cereus ATCC 10987] Length = 285 Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 110/276 (39%), Positives = 169/276 (61%), Gaps = 5/276 (1%) Query: 36 IGLVQLRVSDLERSLAFYQNVVGLKVLRQNGREVEMTADGQHVLLVLREIKNARVLRRNS 95 + +V L VS++++SL FY V+ +KVL+++ V + LL++ E K A + ++ Sbjct: 11 LDVVHLYVSNIKKSLEFYTEVLSMKVLKEDEMVVTFGNENNEPLLIIEEKKEA-LPKQRG 69 Query: 96 AAGLYHFAILVPDRPSLGLVLRNLIDSGIHI-GQGDHLVSEALYIQDPDNNGIELYRDRP 154 GLYH+AIL+P R L +LR+L++ + G DH SEALY+ DPD NGIE+Y DR Sbjct: 70 RTGLYHYAILLPSRQDLANILRHLVEMVYPLHGGADHYFSEALYLADPDGNGIEIYHDRQ 129 Query: 155 RDTWKHEANGNVVMTTDPVDVDGLLAASEGLSWTGLPAGTVIGHVHFHVGDIGEAKKFYV 214 ++ W+ E NG + ++P+ + LL +G +W G PAGTV+GH+HFHV D+ EAK+FYV Sbjct: 130 KEVWRDE-NGELPFVSNPLAGEELL--QQGSTWNGFPAGTVMGHIHFHVADLEEAKRFYV 186 Query: 215 DTLGFELTAHYGDAAMFISAGGYHHHMGLNIWXXXXXXXXXXXXXXIDYFTLLLPSVQER 274 D LGFE+T + A+F+SAGGYHHH+GLN W + YFT++L + +++ Sbjct: 187 DGLGFEVTIPARNGALFVSAGGYHHHIGLNTWQGEGILPQMPNSVGLKYFTIVLANEKQK 246 Query: 275 DLAAERVRSAGYRVDEAGGIVTVTDPWNIGIQLLVK 310 + E +++ G GI+ V DP+ I +K Sbjct: 247 EQVCESLKNIGKIATYKDGILQVEDPFGHCIHFKIK 282 >ref|NP_691363.1| hypothetical protein OB0442 [Oceanobacillus iheyensis HTE831] dbj|BAC12398.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 286 Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 106/276 (38%), Positives = 167/276 (60%), Gaps = 12/276 (4%) Query: 33 SLEIGLVQLRVSDLERSLAFYQNVVGLKVLRQNGREVEMTADGQHVLLVLREIKNARVLR 92 ++ I V L+VS+LERS+ FY+ V+GL VL++ +V+++A+GQ V+L L + N + + Sbjct: 10 TMHIKDVTLQVSNLERSIRFYEQVLGLHVLKKEANQVKLSANGQDVILSLMQPTNV-IAK 68 Query: 93 RNSAAGLYHFAILVPDRPSLGLVLRNLID----SGIHIGQGDHLVSEALYIQDPDNNGIE 148 + GLYH AIL+P R LG LR+ ++ + ++IG DH+VSEA+YI DPD NG+E Sbjct: 69 QGRTTGLYHVAILLPTREDLGAFLRHFMELDIANQVNIGASDHIVSEAIYISDPDGNGLE 128 Query: 149 LYRDRPRDTWKHEANGNVVMTTDPVDVDGLLAASEGLSWTGLPAGTVIGHVHFHVGDIGE 208 + DRP W + V+M+T+P+D GLL A+ W G P T++GH+H HV D+ + Sbjct: 129 IASDRPSSEWSWNIDNKVIMSTEPLDGHGLLEAANNHEWNGSPDNTIVGHLHLHVDDLVK 188 Query: 209 AKKFYVDTLGFELTAHYGDAAMFISAGGYHHHMGLNIWXXXXXXXXXXXXXXIDYFTLLL 268 AK+FY + LGF++ Y A+F+S GGYHHH+ +NIW + +T+ Sbjct: 189 AKQFYTEGLGFQVVTEY-PGALFLSDGGYHHHLAVNIWNGENVPTPRKNEVGLKNYTMRF 247 Query: 269 PSVQERDLAAERVRSAGYR------VDEAGGIVTVT 298 PS ++ +A +R+ GY +D AG + ++ Sbjct: 248 PSEDKKQVAIQRLSRLGYETQDDIVIDSAGNTILLS 283 >ref|NP_834066.1| Glyoxalase family protein [Bacillus cereus ATCC 14579] gb|AAP11267.1| Glyoxalase family protein [Bacillus cereus ATCC 14579] Length = 285 Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 112/276 (40%), Positives = 165/276 (59%), Gaps = 5/276 (1%) Query: 36 IGLVQLRVSDLERSLAFYQNVVGLKVLRQNGREVEMTADGQHVLLVLREIKNARVLRRNS 95 + +V L VS++++SL FY V+ +KVL++ V + LL++ E K A +R Sbjct: 11 LDVVHLYVSNVKKSLEFYTEVLSMKVLKEEEAVVTFGNENDEPLLIIEEKKEAFPKQRGR 70 Query: 96 AAGLYHFAILVPDRPSLGLVLRNLIDSGIHI-GQGDHLVSEALYIQDPDNNGIELYRDRP 154 GLYH+AIL+P R L VLR+L++ + G DH SEALY+ DPD NGIE+Y DR Sbjct: 71 T-GLYHYAILLPSRQDLANVLRHLVEMVYPLHGGADHYFSEALYLADPDGNGIEIYHDRQ 129 Query: 155 RDTWKHEANGNVVMTTDPVDVDGLLAASEGLSWTGLPAGTVIGHVHFHVGDIGEAKKFYV 214 ++ W+ E NG + ++P+ + LL +G +W G PAGTV+GH+HFHV D+ EAK FYV Sbjct: 130 KEVWRDE-NGELPFVSNPLAGEELL--QQGSTWNGFPAGTVMGHIHFHVADLEEAKCFYV 186 Query: 215 DTLGFELTAHYGDAAMFISAGGYHHHMGLNIWXXXXXXXXXXXXXXIDYFTLLLPSVQER 274 D LGFE+T + A+F+SAGGYHHH+GLN W + YFT++L +++ Sbjct: 187 DGLGFEVTIPARNGALFVSAGGYHHHIGLNTWQGEGVPPQMPGSVGLKYFTIVLADEKQK 246 Query: 275 DLAAERVRSAGYRVDEAGGIVTVTDPWNIGIQLLVK 310 + E +++ G GI+ V DP+ I +K Sbjct: 247 EQVCESLKNIGKIATYKDGILQVEDPFGHCIHFKIK 282 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.140 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 444,720,169 Number of extensions: 17985752 Number of successful extensions: 45684 Number of sequences better than 1.0e-05: 50 Number of HSP's gapped: 45555 Number of HSP's successfully gapped: 54 Length of query: 311 Length of database: 757,237,578 Length adjustment: 125 Effective length of query: 186 Effective length of database: 417,850,203 Effective search space: 77720137758 Effective search space used: 77720137758 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)