BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0569.0022.p
         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_952031.1| conserved hypothetical protein [Geobacter sulfu...   160   6e-39
ref|NP_628425.1| putative secreted protein [Streptomyces coelico...   151   5e-36
ref|ZP_00110803.1| hypothetical protein [Nostoc punctiforme]          140   9e-33
ref|NP_927051.1| hypothetical protein glr4105 [Gloeobacter viola...   140   9e-33
ref|NP_107035.1| hypothetical protein mlr6551 [Mesorhizobium lot...   127   8e-29

>ref|NP_952031.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gb|AAR34304.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
          Length = 120

 Score =  160 bits (406), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 89/119 (74%), Gaps = 1/119 (0%)

Query: 34  LQTEFSFTLPKGYVDEAGTLHKQGTMRLATAADEITPLRDSRVQQNPAYLTVILLSRVVT 93
            QTEF FTLPKGYVD  G LH+QG MRLATAADE+ PL+D RVQQNPAYLTVILLSRV+ 
Sbjct: 3   FQTEFEFTLPKGYVDGEGNLHRQGIMRLATAADEVLPLKDPRVQQNPAYLTVILLSRVMV 62

Query: 94  SLGGLSMITPRVIEELYTSDFAYLQDMYNRINQNGSNTVHTKCPKCEQPFELELESPGE 152
            LG L  + PR++E L+ SD +YLQ+ Y +IN  G+  V   CP+CE  F +EL +PGE
Sbjct: 63  KLGSLPEVNPRIVEGLFVSDLSYLQEFYRQINDGGAAQVKAVCPRCEHAFTMEL-APGE 120


>ref|NP_628425.1| putative secreted protein [Streptomyces coelicolor A3(2)]
 emb|CAB77345.1| putative secreted protein [Streptomyces coelicolor A3(2)]
          Length = 177

 Score =  151 bits (381), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 65/114 (57%), Positives = 86/114 (75%)

Query: 34  LQTEFSFTLPKGYVDEAGTLHKQGTMRLATAADEITPLRDSRVQQNPAYLTVILLSRVVT 93
           +QTEF F LP+GYVDE+GT+H+ G MRL+TA DE+ PLRD RVQ+NPAYL+V+LL RV+T
Sbjct: 56  MQTEFPFELPRGYVDESGTVHRDGVMRLSTARDELIPLRDVRVQENPAYLSVVLLGRVIT 115

Query: 94  SLGGLSMITPRVIEELYTSDFAYLQDMYNRINQNGSNTVHTKCPKCEQPFELEL 147
            LG L+M+   V+E ++ SD A+LQD Y +IN  G      +CP C +PFE+EL
Sbjct: 116 RLGTLAMVHDGVVENMFASDLAFLQDFYRQINAEGHTRAAVECPHCSEPFEVEL 169


>ref|ZP_00110803.1| hypothetical protein [Nostoc punctiforme]
          Length = 120

 Score =  140 bits (353), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 62/118 (52%), Positives = 80/118 (67%)

Query: 35  QTEFSFTLPKGYVDEAGTLHKQGTMRLATAADEITPLRDSRVQQNPAYLTVILLSRVVTS 94
           QTEF F LP+GY+D  G  H++G MRL+TA DEI P+RD RVQ+NP YL +ILL+R +  
Sbjct: 3   QTEFPFILPQGYLDSEGNTHREGIMRLSTAYDEIAPIRDPRVQKNPGYLVIILLARTIVQ 62

Query: 95  LGGLSMITPRVIEELYTSDFAYLQDMYNRINQNGSNTVHTKCPKCEQPFELELESPGE 152
           LG L  I  ++IE L++ D  YLQD Y RINQNG + +   CP C+  FE+E    GE
Sbjct: 63  LGTLDQINTKIIEGLFSGDLVYLQDFYQRINQNGHSRLRVACPHCDGEFEVETIPVGE 120


>ref|NP_927051.1| hypothetical protein glr4105 [Gloeobacter violaceus]
 dbj|BAC92046.1| glr4105 [Gloeobacter violaceus PCC 7421]
          Length = 123

 Score =  140 bits (353), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 85/119 (71%)

Query: 34  LQTEFSFTLPKGYVDEAGTLHKQGTMRLATAADEITPLRDSRVQQNPAYLTVILLSRVVT 93
            Q+EF+FTLP+G + E   LH+QGTMRLATA DE+   +DSRVQ NPAY  +++LSRV+ 
Sbjct: 5   FQSEFAFTLPRGLLGEGDELHRQGTMRLATARDEMAVQKDSRVQANPAYGVLVMLSRVIV 64

Query: 94  SLGGLSMITPRVIEELYTSDFAYLQDMYNRINQNGSNTVHTKCPKCEQPFELELESPGE 152
            LG L+ ITP  +E L+T D AYL+++YNR+NQ G+  +  +CP+C   F +EL   GE
Sbjct: 65  RLGTLAAITPEALENLFTRDIAYLRELYNRLNQQGNVHIAAQCPQCNSRFAVELALSGE 123


>ref|NP_107035.1| hypothetical protein mlr6551 [Mesorhizobium loti MAFF303099]
 dbj|BAB52821.1| hypothetical protein [Mesorhizobium loti]
          Length = 125

 Score =  127 bits (319), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 69/92 (75%)

Query: 34  LQTEFSFTLPKGYVDEAGTLHKQGTMRLATAADEITPLRDSRVQQNPAYLTVILLSRVVT 93
            QTE  F LPKGYVD AGTLH+QG MRLATAADEI PLRD RVQ+N AYL+VI+L+RV+ 
Sbjct: 7   FQTEIEFELPKGYVDGAGTLHRQGVMRLATAADEILPLRDPRVQENEAYLSVIVLARVIV 66

Query: 94  SLGGLSMITPRVIEELYTSDFAYLQDMYNRIN 125
            LG L  + P VIE LY SD AYLQ +Y   N
Sbjct: 67  RLGSLKDVHPGVIEGLYASDLAYLQRLYETFN 98


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.316    0.133    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 223,072,062
Number of extensions: 7907025
Number of successful extensions: 19935
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 19935
Number of HSP's successfully gapped: 8
Length of query: 152
Length of database: 757,237,578
Length adjustment: 111
Effective length of query: 41
Effective length of database: 455,861,589
Effective search space: 18690325149
Effective search space used: 18690325149
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 120 (50.8 bits)