BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0050.p (337 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_712890.1| Putative glycosyl transferase [Leptospira inter... 209 1e-52 ref|NP_603991.1| Dolichol-phosphate mannosyltransferase [Fusobac... 193 5e-48 ref|ZP_00144007.1| Glycosyltransferase involved in cell wall bio... 191 2e-47 gb|AAS69899.1| dolichyl-phosphate mannose synthase [Leptospira i... 184 2e-45 gb|EAB93861.1| unknown [environmental sequence] 133 5e-30 >ref|NP_712890.1| Putative glycosyl transferase [Leptospira interrogans serovar lai str. 56601] gb|AAN49908.1| Putative glycosyl transferase [Leptospira interrogans serovar lai str. 56601] Length = 351 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 109/272 (40%), Positives = 161/272 (59%), Gaps = 3/272 (1%) Query: 3 ILIPAYEPDERLLDLIEQLCDYQLGPIVLVDDGSGPAYQGIFNIAAAFG-CTVLTHPVNF 61 I+IPAY PDERL+ L+++L + IV+++DGS + +F F C +L H N Sbjct: 11 IIIPAYNPDERLVQLVDELIQQGIVNIVVINDGSRESCASVFKKLTKFKQCHLLHHATNL 70 Query: 62 GKGLALKTGLRYIREAGLPGY-VVCADSDGQHLPHDIKRIAGVLQNQTTPGIVLGSRRFS 120 GKG ALK+ + Y + VV AD+DGQH DI ++ L ++LGSR+F Sbjct: 71 GKGRALKSAINYCMLTFPQMFGVVTADADGQHKVSDIIKVVQSLLKHPDQ-LILGSRKFD 129 Query: 121 GTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFEYEMNMLL 180 VP RS GN +T +VF+ G ++ DTQTGLRG + L ++ GER+EYEMNML+ Sbjct: 130 KDVPFRSLLGNKITSIVFAFLIGRRLIDTQTGLRGIPTKFLSTCLRLSGERYEYEMNMLI 189 Query: 181 TAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALLDFTLLFL 240 + + EE I+T+YLE+N+SSHF PL DS RIY F+ SS++++ +DF + + Sbjct: 190 STKEHRLRIFEESIETLYLENNKSSHFNPLIDSARIYFLFFRFAFSSMLTSAIDFCVFTV 249 Query: 241 FQRLTHNLFLSVAAARLCSSIFNYSMNRRYVF 272 NL S+ +R + FN+ +N+R+VF Sbjct: 250 VYLSVSNLLTSIIFSRTVAGTFNFFVNKRFVF 281 >ref|NP_603991.1| Dolichol-phosphate mannosyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL95290.1| Dolichol-phosphate mannosyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 360 Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 123/357 (34%), Positives = 181/357 (50%), Gaps = 23/357 (6%) Query: 1 MTILIPAYEPDERLLDLIEQLCDYQLGPIVLVDDGSGPAYQGIFNIAAAF---GCTVLTH 57 + ILIPA P ++L+D ++ L + L I+LVDDGS ++ IF+I F V H Sbjct: 4 ILILIPALNPPKQLIDYVKSLLENGLNDILLVDDGSKEEFKEIFDIIEKFPEGNIKVFRH 63 Query: 58 PVNFGKGLALKTGLRY-IREAGLPGY--VVCADSDGQHLPHDIKRIAGVLQNQTTPGIVL 114 N GKG ALK Y + L Y VV ADSDGQH D+ ++A ++ + ++L Sbjct: 64 AKNLGKGRALKNAFNYFLTLPNLAEYSGVVTADSDGQHRVEDVIKVAKEVE-ENPNKLIL 122 Query: 115 GSRRFS-GTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFE 173 G R F VP +SRFGN +T F L G I DTQTGLRGF ++ I GERFE Sbjct: 123 GCRDFDLEQVPPKSRFGNKITNGAFKLFYGKNISDTQTGLRGFPTAIIKDFLDIAGERFE 182 Query: 174 YEMNMLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYL----PLLMF---STS 226 YE ML+ ++ + E I+T+Y DN +HF P+ DS +IY P L + +TS Sbjct: 183 YETKMLIYCFQKEIEIKEVVIETIYFNDNSETHFNPILDSIKIYKVTLSPFLKYIASATS 242 Query: 227 SLVSALLDFTLLFLFQRLTHN------LFLSVAAARLCSSIFNYSMNRRYVFTGGKMSKL 280 S + +L F + N + +S AR+ SS FN+ +N+++VF K +K Sbjct: 243 SFILDILSFKWILAILIALGNIEGAGIITISTIVARIISSSFNFYLNKKFVFKYEKNTK- 301 Query: 281 QQSLPKYFAXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXTEASIFLFSYWAQRRFVY 337 +SL KY++ + ++ +FL SY+ Q+R+V+ Sbjct: 302 -KSLLKYYSLCTVQMLLSATLVTVVWKHTRYAETSIKIVVDSILFLLSYFIQQRWVF 357 >ref|ZP_00144007.1| Glycosyltransferase involved in cell wall biogenesis [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gb|EAA24388.1| Glycosyltransferase involved in cell wall biogenesis [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 360 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/357 (34%), Positives = 180/357 (50%), Gaps = 23/357 (6%) Query: 1 MTILIPAYEPDERLLDLIEQLCDYQLGPIVLVDDGSGPAYQGIFNIAAAF---GCTVLTH 57 + ILIPA P +L+D ++ L D L I+LVDDGS ++ IF+ F V H Sbjct: 4 ILILIPALNPPIQLIDYVKLLLDNGLKDILLVDDGSKEEFKEIFDTIEKFPNANIKVFKH 63 Query: 58 PVNFGKGLALKTGLRY-IREAGLPGY--VVCADSDGQHLPHDIKRIAGVLQNQTTPGIVL 114 N GKG ALK Y + L Y VV ADSDGQH D+ ++A ++ + ++L Sbjct: 64 AKNLGKGRALKNAFNYFLTLPNLAEYSGVVTADSDGQHRVEDVIKVAKEVE-ENPNKLIL 122 Query: 115 GSRRFS-GTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFE 173 G R F VP +S+FGN +T F L G I DTQTGLRGF ++ I GERFE Sbjct: 123 GCRDFDLEQVPPKSKFGNKITNGAFKLFYGKNISDTQTGLRGFPTAIIKDFLDIVGERFE 182 Query: 174 YEMNMLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYL----PLLMFSTSSLV 229 YE ML+ ++ + E I+TVY DN +HF P+ DS +IY P L + S++ Sbjct: 183 YETKMLIYCFQKEIEIKEVVIETVYFNDNSETHFNPIIDSLKIYKVTLSPFLKYIASAIS 242 Query: 230 SALLD-------FTLLFLFQRLTHNLFLSVA--AARLCSSIFNYSMNRRYVFTGGKMSKL 280 S +LD +L F + ++++ AR+ SS FN+ +N+++VF K +K Sbjct: 243 SFILDILSFKWILIILIAFGNIERAAVITISTIVARVISSTFNFYLNKKFVFKYEKNTK- 301 Query: 281 QQSLPKYFAXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXTEASIFLFSYWAQRRFVY 337 +SL KY++ + + +FL SY+ Q+R+V+ Sbjct: 302 -KSLLKYYSLCVVQMLLSAVLVTVVWKHTKYPETRIKIVVDTILFLLSYFVQQRWVF 357 >gb|AAS69899.1| dolichyl-phosphate mannose synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 329 Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/260 (38%), Positives = 151/260 (58%), Gaps = 3/260 (1%) Query: 15 LDLIEQLCDYQLGPIVLVDDGSGPAYQGIFNIAAAFG-CTVLTHPVNFGKGLALKTGLRY 73 + L+++L + IV+++DGS + IF F C +L H N GKG ALK+ + Y Sbjct: 1 MQLVDELIQQGIVNIVVINDGSRESCTPIFKKLTKFKQCHLLHHATNLGKGRALKSAINY 60 Query: 74 IREAGLPGY-VVCADSDGQHLPHDIKRIAGVLQNQTTPGIVLGSRRFSGTVPLRSRFGNS 132 + VV AD+DGQH D+ ++ L + ++LGSR+F VP RS GN Sbjct: 61 CMLTFPQMFGVVTADADGQHKVSDVIKVVQSLL-KYPDQLILGSRKFDKDVPFRSLLGNK 119 Query: 133 VTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFEYEMNMLLTAHREGYTVTEE 192 +T +VF+ G ++ DTQTGLRG + L ++ GER+EYEMNML++ + EE Sbjct: 120 ITSIVFAFLIGRRLIDTQTGLRGIPTKFLSTCLRLSGERYEYEMNMLISTKEHRLRIFEE 179 Query: 193 FIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALLDFTLLFLFQRLTHNLFLSV 252 I+T+YLE+N+SSHF PL DS RIY F+ SS++++ +DF + + NL S+ Sbjct: 180 SIETLYLENNKSSHFNPLIDSARIYFLFFRFAFSSMLTSAIDFCVFTIVYLSVSNLLTSI 239 Query: 253 AAARLCSSIFNYSMNRRYVF 272 +R + FN+ +N+R+VF Sbjct: 240 IFSRTVAGTFNFFVNKRFVF 259 >gb|EAB93861.1| unknown [environmental sequence] Length = 261 Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 136/248 (54%), Gaps = 15/248 (6%) Query: 3 ILIPAYEPDERLLDLIEQLC-----DYQLG--PIVLVDDGSG-PAYQGIFNI-AAAFGCT 53 ++IPA P E L++L+ L D ++G IV+++DGS + +FNI Sbjct: 13 VVIPALNPTEALVELVGSLLLLSNRDEKIGSLAIVIINDGSNIKECEKVFNILRNKENVF 72 Query: 54 VLTHPVNFGKGLALKTGLRYIREAGLPGYVVCADSDGQHLPHDIKRIAGVLQNQTTPGIV 113 ++ + N GKG +LK G + + ++ AD DGQH DI ++ + + + Sbjct: 73 IVDNKYNLGKGASLKVGFDFFKNH--VSFIATADCDGQHSADDILKV--LKTSMIEKRLA 128 Query: 114 LGSRRFSGT-VPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERF 172 +G R F G VP++SR GN +T + + T K+ DTQTGLR F ++++ I GER+ Sbjct: 129 IGVRDFFGKQVPIKSRIGNILTTSIIFIITAQKLVDTQTGLRSFPSKLIEKCFSIEGERY 188 Query: 173 EYEMNMLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSAL 232 EYE+N LL+ ++ V I+T+Y + N++S F P DS IY +L F + +L Sbjct: 189 EYEINFLLSFIKKEKIVQVP-IETIYFKKNEASKFMPAIDSLIIYSNILKFFRNVFALSL 247 Query: 233 LDFTLLFL 240 ++F+L+F+ Sbjct: 248 IEFSLIFV 255 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.325 0.141 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 449,464,211 Number of extensions: 17739164 Number of successful extensions: 51942 Number of sequences better than 1.0e-05: 98 Number of HSP's gapped: 51961 Number of HSP's successfully gapped: 98 Length of query: 337 Length of database: 757,237,578 Length adjustment: 126 Effective length of query: 211 Effective length of database: 415,135,104 Effective search space: 87593506944 Effective search space used: 87593506944 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 126 (53.1 bits)