BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0560.0024.p (865 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] 579 e-163 emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] 575 e-162 pir||T44806 mycosubtilin synthetase chain mycA [imported] - Baci... 572 e-161 gb|EAJ16016.1| unknown [environmental sequence] 352 2e-95 gb|AAN32979.1| BarE [Lyngbya majuscula] 345 3e-93 >dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] Length = 3982 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 279/655 (42%), Positives = 427/655 (65%), Gaps = 14/655 (2%) Query: 5 RSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFIL 64 RS + +GI FI D SY++++ A G L +L+ GI+ E++FQI+ N++F++ Sbjct: 16 RSSISDRGIRFIESDKNETVVSYRQLFEEAQGYLGYLQHLGIKPKQEIVFQIQENKSFVV 75 Query: 65 AFWACILGGMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQTDFYR 124 AFWACILGGMIPVPV++G +D+HK K+ +IWN+L+ PFLI + L K A + D Sbjct: 76 AFWACILGGMIPVPVSIGEDDDHKLKVWRIWNILNHPFLIASEKVLDKIKKYAAEHDLQD 135 Query: 125 FASSITNRT--IHTETLEYSGTEDVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNLLT 182 F + ++ I +T +Y + P++ ++AFIQFSSG+TGDPKGV LTH NL+ Sbjct: 136 FHHQLNEKSDIIQDQTYDYPAS----FYEPDADELAFIQFSSGSTGDPKGVMLTHHNLIH 191 Query: 183 NLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCGGSQSLLPTWVFIRRPTLWIK 242 N + + + DSFLSWMPLTHDMG+I HL+P G +Q+L+PT +FIRRP LW+K Sbjct: 192 NTCAIGTALAIHSKDSFLSWMPLTHDMGLIACHLVPFITGINQNLMPTELFIRRPILWMK 251 Query: 243 KASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAKLCNEFLEVM 302 KA + K+++++SPNFG YFL F + +WDLS+++V+ + AEPI +LC+EFL+ Sbjct: 252 KAHEHKASILSSPNFGYNYFLKFL---KNEPDWDLSHIKVIANGAEPILPELCDEFLKRC 308 Query: 303 DKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIVEENYKDKEY 362 F+L R+++L YGLAEA+ K G EF + R +N G R V K+ + Sbjct: 309 AAFNLKRSAILNVYGLAEASVGAAFSKIGKEFVPVYLHRDYLNLGERAVNVS---KEDQN 365 Query: 363 IVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEATRKVFTKDG 422 S V++G PI+ C +R+ DE + +++ ++GH+QIKG+NVT GYYNN E+T KV T DG Sbjct: 366 CASFVEVGQPIDYCQLRISDETNERVEDGIIGHIQIKGDNVTQGYYNNPESTEKVLTSDG 425 Query: 423 WLRTGDLGFMKD-GSLIVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGVTAACGVYN 481 W++TGDLGF+ + G+L+VTGREKDIIF+NG+N YP DIERVA E +G AACGVY+ Sbjct: 426 WVKTGDLGFISESGNLVVTGREKDIIFVNGKNIYPHDIERVAIEMEEVDLGRVAACGVYD 485 Query: 482 EQLATEEVILFVNYKDKPETFVPLAIELRKQLNLKVGIHVRHIIPVKKILKTTSGKVQRY 541 ++ + E++LFV YK PE F PL E++K L + G ++ ++P++K+ KTTSGKV+RY Sbjct: 486 QKTQSGEIVLFVVYKKSPEKFAPLVKEIKKHLYKRGGWSIKEVLPIRKLPKTTSGKVKRY 545 Query: 542 KMKNLFLEGQFTGLLAEMEEVTNTITSRIDADQPKDTVEAALLSIWANVLGNDRLGVKDN 601 ++ + G F+ A + E + + P +E LLSI++ VL ++ + D+ Sbjct: 546 ELARQYEAGNFSTESAAINECLES-SPETSGQTPIHEIETELLSIFSEVLNGKKVHLADS 604 Query: 602 FFEIGGTSTLLAQMFEQVDREYPGKITLTDLFGHPSISKLAGLIRQDGSDINASA 656 +F++G S L+Q+ E++++++ ++ ++DLF +PSI+ LA + + ++I A Sbjct: 605 YFDMGANSLQLSQIAERIEQKFGRELAVSDLFTYPSITDLAAYLSESRAEIKQDA 659 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 172/756 (22%), Positives = 298/756 (39%), Gaps = 130/756 (17%) Query: 1 MLIARSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNE 60 M +S D H+ + F N Y+Y+++ RA R LR+KG+Q+ V + Sbjct: 2959 MQAEQSPD-HEAVIFGN-----ERYTYRQLNERANRLARTLRTKGVQADQFVAIICPHRI 3012 Query: 61 TFILAFWACILGGMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQT 120 I+ A + G VP++ E+ I+ R ++ RSLL D + Sbjct: 3013 ELIVGILAVLKAGGAYVPID----PEYPENRIQYMLRDSRAEVVLTQRSLL--DQLPYDG 3066 Query: 121 DFYRFASSITNRTIHTETLEYSGTEDVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNL 180 D + H E + D +HD+A++ ++SG+TG+PKGV + H L Sbjct: 3067 DVVLLDEE---NSYHEEHSNFESDSD-------AHDLAYMIYTSGSTGNPKGVLIEHQGL 3116 Query: 181 LTNLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCG-------GSQSLLPTWVF 233 ++ K+ +F + ++ D+ + PL G G Sbjct: 3117 ADYIWWAKEVYVRGEKTNFPLYSSISFDLTVTSI-FTPLVTGNTIIVFDGEDKSAVLSEI 3175 Query: 234 IRRPTLWIKKASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAK 293 +R + + K + VI N + +R ++ E + + Sbjct: 3176 MRDSRIDMIKLTPAHLHVIKEMNIAGD-----------------TAIRKMIVGGENLSTR 3218 Query: 294 LCNEFLEVMDKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIV 353 L V ++F R + YG EA +Y ++ VR Sbjct: 3219 LAKS---VSEQFK-GRLDIFNEYGPTEAVVGCMIYH-------FDAVR------------ 3255 Query: 354 EENYKDKEYIVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEA 413 DK V +G P N + V D ++ V+G + I G V GY+N + Sbjct: 3256 -----DKR---EFVPIGTPAANTDIYVADASRNLVPIGVIGEIYISGPGVARGYWNRPDL 3307 Query: 414 TRKVFTKDGWL------RTGDLG-FMKDGSLIVTGREKDIIFINGQNFYPQDIERVAEEF 466 T + F ++ ++ ++GDL +KDG+L+ GR + + I G +IE Sbjct: 3308 TEEKFVENPYVPGAKMYKSGDLAKRLKDGNLVYIGRVDEQVKIRGHRIELGEIEAAMHNA 3367 Query: 467 TGTRIGVTAACGVYNEQLATEEVILFVNYKDKPETFVPLAIELRKQLNLKVGIHV--RHI 524 + AA V E+ +++ + DKP A +LR+QL+ + ++ + Sbjct: 3368 EAVQ---KAAVTVKEEEDGLKQLCAYY-VSDKPIA----AAQLREQLSSGLPDYMVPSYF 3419 Query: 525 IPVKKILKTTSGKVQRYKMKNLFLEGQFTGLLAEMEEVTNTITSRIDADQPKDTVEAALL 584 + ++ + T++GK+ R L + L E V P + E+ L Sbjct: 3420 VRLEHMPLTSNGKINRKA-----LPAPESSLQQTAEYVP-----------PGNETESKLT 3463 Query: 585 SIWANVLGNDRLGVKDNFFEIGGTSTLLAQMFEQVDREYPGKITLTDLFGHPSISKLAGL 644 +W VLG G+K NFF++GG S A + ++ +E ++L D+F P+I +LA Sbjct: 3464 DLWKEVLGISHAGIKHNFFDLGGNSIRAAALAARIHKELDVNLSLKDIFKFPTIEQLAD- 3522 Query: 645 IRQDGSDINASAHIRAL-ELPEEFFKNGSHAEEEDGLSRTLSFSVDHKFTGQLK------ 697 + D N I A E+P ++ S LS T + + TG +K Sbjct: 3523 -KALHMDKNRYVPIPAAKEMP--YYPVSSAQRRMYLLSHTEGGELTYNMTGAMKVEGTID 3579 Query: 698 --RIAAAEH---LKHESILLSMFVYLLYELSPSARI 728 R+ AA +HE++ S + LYE P+ RI Sbjct: 3580 PERLNAAFRKLIARHEALRTS---FDLYEGEPAQRI 3612 >emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] Length = 3982 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 276/655 (42%), Positives = 425/655 (64%), Gaps = 14/655 (2%) Query: 5 RSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFIL 64 RS + +GI FI D SY++++ A G L +L+ GI+ E++FQI+ N++F++ Sbjct: 16 RSNISDRGIRFIESDKNETVVSYRQLFEEAQGYLGYLQHLGIKPKQEIVFQIQENKSFVV 75 Query: 65 AFWACILGGMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQTDFYR 124 AFWACILGGMIPVPV++G +D+HK K+ +IWN+L+ PFLI + L K A + D Sbjct: 76 AFWACILGGMIPVPVSIGEDDDHKLKVWRIWNILNHPFLIASEKVLDKIKKYAAEHDLQD 135 Query: 125 FASSITNRT--IHTETLEYSGTEDVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNLLT 182 F + ++ I + +Y + P++ ++AFIQFSSG+TGDPKGV LTH NL+ Sbjct: 136 FHHQLNEKSDVIQDQIYDYPAS----FYEPDADELAFIQFSSGSTGDPKGVMLTHHNLIH 191 Query: 183 NLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCGGSQSLLPTWVFIRRPTLWIK 242 N + + + + DSFLSWMPLTHDMG+I HL+P G +Q+L+PT +FIRRP LW+K Sbjct: 192 NTCAIGNALHVHSKDSFLSWMPLTHDMGLIACHLVPFITGINQNLMPTELFIRRPILWMK 251 Query: 243 KASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAKLCNEFLEVM 302 KA + K+++++SPNFG YFL F + +WDLS+++V+ + AEPI +LC+EFL+ Sbjct: 252 KAHEHKASILSSPNFGYNYFLKFL---KNEPDWDLSHIKVIANGAEPILPELCDEFLKRC 308 Query: 303 DKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIVEENYKDKEY 362 F+L R+++L YGLAEA+ K G EF + R +N G R V K+ + Sbjct: 309 AAFNLKRSAILNVYGLAEASVGAAFSKIGKEFVPVYLHRDYLNLGERAVKVS---KEDQN 365 Query: 363 IVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEATRKVFTKDG 422 S V++G PI+ C +R+ DE + +++ ++GH+ IKG+NVT GYYNN E+T K T DG Sbjct: 366 CASFVEVGQPIDYCQLRISDETNERVEDGIIGHIHIKGDNVTQGYYNNPESTEKALTSDG 425 Query: 423 WLRTGDLGFMKD-GSLIVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGVTAACGVYN 481 W++TGDLGF+ + G+L+VTGREKDIIF+NG+N YP DIERVA E +G AACGVY+ Sbjct: 426 WVKTGDLGFISESGNLVVTGREKDIIFVNGKNIYPHDIERVAIEMEEVDLGRVAACGVYD 485 Query: 482 EQLATEEVILFVNYKDKPETFVPLAIELRKQLNLKVGIHVRHIIPVKKILKTTSGKVQRY 541 ++ + E++LFV YK PE F PL E++K L + G ++ ++P++K+ KTTSGKV+RY Sbjct: 486 QKTQSGEIVLFVVYKKSPEKFAPLVKEIKKHLYKRGGWSIKEVLPIRKLPKTTSGKVKRY 545 Query: 542 KMKNLFLEGQFTGLLAEMEEVTNTITSRIDADQPKDTVEAALLSIWANVLGNDRLGVKDN 601 ++ + G F+ A + E + + P +E LLSI++ VL ++ + D+ Sbjct: 546 ELARQYEAGNFSTESAAINECLES-SPETSGQTPIHEIETELLSIFSEVLNGKKVHLADS 604 Query: 602 FFEIGGTSTLLAQMFEQVDREYPGKITLTDLFGHPSISKLAGLIRQDGSDINASA 656 +F++G S L+Q+ E++++++ ++ ++DLF +PSI+ LA + + ++I A Sbjct: 605 YFDMGANSLQLSQIAERIEQKFGCELAVSDLFTYPSITDLAAYLSESRAEIKQDA 659 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 144/670 (21%), Positives = 264/670 (39%), Gaps = 140/670 (20%) Query: 4 ARSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFI 63 A H+ + F N Y+Y+++ RA R LR+KG+Q+ V + I Sbjct: 2961 AEQSPDHEAVIFGN-----ERYTYRQLNERANRLARTLRTKGVQADQFVAIICPHRIELI 3015 Query: 64 LAFWACILGGMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQTDFY 123 + A + G VP++ E+ I+ +++ DSR+ + Sbjct: 3016 VGILAVLKAGGAYVPID----PEYPEDRIQ--------YMLRDSRAEV------------ 3051 Query: 124 RFASSITNRTIHTETLEYSGTEDVVLCSPE---------------SHDIAFIQFSSGTTG 168 +T R++ + L Y G DVVL E +HD+A++ ++SG+TG Sbjct: 3052 ----VLTQRSL-LDQLPYDG--DVVLLDEENSYHEEHSNLESDSDAHDLAYMIYTSGSTG 3104 Query: 169 DPKGVTLTHDNLLTNLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCG------ 222 +PKGV + H L ++ K+ +F + ++ D+ + PL G Sbjct: 3105 NPKGVLIEHQGLADYIWWAKEVYVRGEKTNFPLYSSISFDLTVTSI-FTPLVTGNTIIVF 3163 Query: 223 -GSQSLLPTWVFIRRPTLWIKKASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVR 281 G +R + + K + VI N + +R Sbjct: 3164 DGEDKSAVLSEIMRDSRIDMIKLTPAHLHVIKEMNIAGG-----------------TAIR 3206 Query: 282 VLLDAAEPIDAKLCNEFLEVMDKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVR 341 ++ E + +L V ++F R + YG EA +Y+ E Sbjct: 3207 KMIVGGENLSTRLAKS---VSEQFK-GRLDIFNEYGPTEAVVGCMIYQFDAE-------- 3254 Query: 342 SSINTGSRVQIVEENYKDKEYIVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGN 401 +DK V +G P N + V D ++ V+G + I G Sbjct: 3255 ----------------RDKR---EFVPIGTPAANTDIYVADASRNLVPIGVIGEIYISGP 3295 Query: 402 NVTNGYYNNEEATRKVFTKDGWL------RTGDLG-FMKDGSLIVTGREKDIIFINGQNF 454 V GY+N + T + F ++ ++ ++GDL +KDG+L+ GR + + I G Sbjct: 3296 GVARGYWNRPDLTAEKFVENPYVPGAKMYKSGDLAKRLKDGNLVYIGRVDEQVKIRGHRI 3355 Query: 455 YPQDIERVAEEFTGTRIGVTAACGVYNEQLATEEVILFVNYKDKPETFVPLAIELRKQLN 514 +IE + AA V E+ +++ + DKP A +LR+QL+ Sbjct: 3356 ELGEIEAAMHNAEAVQ---KAAVTVKEEEDGLKQLCAYY-VSDKPIA----AAQLREQLS 3407 Query: 515 LKVGIHV--RHIIPVKKILKTTSGKVQRYKMKNLFLEGQFTGLLAEMEEVTNTITSRIDA 572 + ++ + + ++ + T++GK+ R + A +++ + Sbjct: 3408 SGLPDYMVPSYFVRLEHMPLTSNGKINRKAL---------PAPEASLQQTAEYVP----- 3453 Query: 573 DQPKDTVEAALLSIWANVLGNDRLGVKDNFFEIGGTSTLLAQMFEQVDREYPGKITLTDL 632 P + E+ L +W VLG G+K NFF++GG S A + ++ +E ++L D+ Sbjct: 3454 --PGNETESKLTDLWKEVLGISHAGIKHNFFDLGGNSIRAAALAARIHKELDVNLSLKDI 3511 Query: 633 FGHPSISKLA 642 F P+I +LA Sbjct: 3512 FKFPTIEQLA 3521 >pir||T44806 mycosubtilin synthetase chain mycA [imported] - Bacillus subtilis gb|AAF08795.1| MycA [Bacillus subtilis] Length = 3971 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 272/653 (41%), Positives = 424/653 (64%), Gaps = 11/653 (1%) Query: 5 RSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFIL 64 RS + +GI FI D + SY++++ A G L +L+ GIQ E++FQI+ N++F++ Sbjct: 16 RSNISDRGIRFIESDKIETFVSYRQLFDEAQGFLGYLQHIGIQPKQEIVFQIQENKSFVV 75 Query: 65 AFWACILGGMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQTDFYR 124 AFWAC+LGGMIPVPV++G +++HK K+ +IWN+L+ PFL+ L K A D Sbjct: 76 AFWACLLGGMIPVPVSIGEDNDHKLKVWRIWNILNNPFLLASETVLDKMKKFAADHDLQD 135 Query: 125 FASSITNRT--IHTETLEYSGTEDVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNLLT 182 F + ++ I ++ ++ PE+ ++AFIQFSSG+TGDPKGV LTH NL+ Sbjct: 136 FHHQLIEKSDIIQDRIYDHPASQ----YEPEADELAFIQFSSGSTGDPKGVMLTHHNLIH 191 Query: 183 NLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCGGSQSLLPTWVFIRRPTLWIK 242 N ++ + D+ LSWMPLTHDMG+I HL+P G +Q+L+PT +FIRRP LW+K Sbjct: 192 NTCAIRNALAIDLKDTLLSWMPLTHDMGLIACHLVPALAGINQNLMPTELFIRRPILWMK 251 Query: 243 KASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAKLCNEFLEVM 302 KA + K+++++SPNFG YFL F + SY+WDLS++RV+ + AEPI +LC+EFL Sbjct: 252 KAHEHKASILSSPNFGYNYFLKFL-KDNKSYDWDLSHIRVIANGAEPILPELCDEFLTRC 310 Query: 303 DKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIVEENYKDKEY 362 F++ R+++L YGLAEA+ T G F + R +N G R V K+ + Sbjct: 311 AAFNMKRSAILNVYGLAEASVGATFSNIGERFVPVYLHRDHLNLGERAVEVS---KEDQN 367 Query: 363 IVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEATRKVFTKDG 422 S V++G PI+ C +R+C+E + L++ +GH+QIKG NVT GYYNN E+T + T DG Sbjct: 368 CASFVEVGKPIDYCQIRICNEANEGLEDGFIGHIQIKGENVTQGYYNNPESTNRALTPDG 427 Query: 423 WLRTGDLGFMKDGSLIVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGVTAACGVYNE 482 W++TGDLGF++ G+L+VTGREKDIIF+NG+N YP DIERVA E +G AACGVY++ Sbjct: 428 WVKTGDLGFIRKGNLVVTGREKDIIFVNGKNVYPHDIERVAIELEDIDLGRVAACGVYDQ 487 Query: 483 QLATEEVILFVNYKDKPETFVPLAIELRKQLNLKVGIHVRHIIPVKKILKTTSGKVQRYK 542 + + E++LF YK + F PL +++K L + G ++ I+P++K+ KTTSGKV+RY+ Sbjct: 488 ETRSREIVLFAVYKKSADRFAPLVKDIKKHLYQRGGWSIKEILPIRKLPKTTSGKVKRYE 547 Query: 543 MKNLFLEGQFTGLLAEMEEVTNTITSRIDADQPKDTVEAALLSIWANVLGNDRLGVKDNF 602 + + G+F +++E ++ P +E ALLSI++ V+ ++ + D++ Sbjct: 548 LAEQYESGKFALESTKIKEFLEGHSTE-PVQTPIHEIETALLSIFSEVMDGKKIHLNDHY 606 Query: 603 FEIGGTSTLLAQMFEQVDREYPGKITLTDLFGHPSISKLAGLIRQDGSDINAS 655 F++G TS L+Q+ E++++++ ++T+ DLF +PSI+ LA + ++ S+I + Sbjct: 607 FDMGATSLQLSQIAERIEQKFGCELTVADLFTYPSIADLAAFLVENHSEIKQT 659 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 152/729 (20%), Positives = 297/729 (40%), Gaps = 120/729 (16%) Query: 26 SYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFILAFWACILGGMIPVPVNVGNND 85 +Y ++ R R LR+KG+Q+ V + I+ A + G VP++ Sbjct: 2967 TYGQLNERVNQLARTLRTKGVQADQFVAIICPHRIELIVGILAVLKAGGAYVPID----P 3022 Query: 86 EHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQTDFYRFASSITNRTIHTETLEYSGTE 145 E+ I+ +++ DS + + Q D ++ + + + E Y Sbjct: 3023 EYPEDRIQ--------YMLKDSEA----KIVLAQLDLHKHLTFDADVVLLDEESSYHEDR 3070 Query: 146 DVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNLLTNLYDLKKSRNYSANDSFLSWMPL 205 + + ++D+A++ ++SG+TG+PKGV + H L + K+ +F + + Sbjct: 3071 SNLEPTCGANDLAYMIYTSGSTGNPKGVLIEHRGLANYIEWAKEVYVNDEKTNFPLYSSI 3130 Query: 206 THDMGMIVFHLLPLTCGGSQSLLPTWVFIRRPTLWIKKASDLKSTVIASPNFGM-KYFLT 264 + D+ + PL G + + + S + ST++ P + K Sbjct: 3131 SFDLTVTSI-FTPLVTGNTIIVFDG-----------EDKSAVLSTIMQDPRIDIIKLTPA 3178 Query: 265 FFYRSQCSYEWDLSNVRVLLDAAEPIDAKLCNEFLEVMDKFSLPRTSLLPGYGLAEATAA 324 + + D + +R ++ E + +L V ++F + + YG EA Sbjct: 3179 HLHVLKEMKIADGTTIRKMIVGGENLSTRLAQS---VSEQFK-GQLDIFNEYGPTEAVVG 3234 Query: 325 VTLYKPGHEFTSYNIVRSSINTGSRVQIVEENYKDKEYIVSLVDLGNPIENCFVRVCDEE 384 +Y+ Y K V +G+P N + V D Sbjct: 3235 CMIYR---------------------------YDTKRDRREFVPIGSPAANTSIYVLDAS 3267 Query: 385 DRVLDECVVGHVQIKGNNVTNGYYNNEEATRKVFTKDGW------LRTGDLG-FMKDGSL 437 ++ V G + I G V GY+N + T + F + + +TGDL ++DG+L Sbjct: 3268 MNLVPVGVPGEMYIGGAGVARGYWNRPDLTAEKFVHNPFAPGTIMYKTGDLAKRLRDGNL 3327 Query: 438 IVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGVTAACGVYNEQLATEEVILFVNYKD 497 I GR + + I G ++E + + V A E+ +++ + + Sbjct: 3328 IYLGRIDEQVKIRGHRIELGEVEAAMHKVEAVQKAVVLA---REEEDGLQQLCAYY-VSN 3383 Query: 498 KPETFVPLAIELRKQLNLKVGIHV--RHIIPVKKILKTTSGKVQRYKMKNLFLEGQFTGL 555 KP T E+R+QL+L++ ++ H I ++++ T++GK+ R + Sbjct: 3384 KPITIA----EIREQLSLELPDYMVPSHYIQLEQLPLTSNGKINRKALP---------AP 3430 Query: 556 LAEMEEVTNTITSRIDADQPKDTVEAALLSIWANVLGNDRLGVKDNFFEIGGTSTLLAQM 615 +E++ + P + VE+ L +W +LG R+G+K NFF++GG S + Sbjct: 3431 EVSLEQIAEYVP-------PGNEVESKLAVLWQEMLGIHRVGIKHNFFDLGGNSIRATAL 3483 Query: 616 FEQVDREYPGKITLTDLFGHPSISKLAGL-IRQDGSDINASAHIRALELPE----EFFKN 670 ++ +E +++ D+F P+I +LA + +R + IR + +P ++ Sbjct: 3484 AARIHKELDVNLSVKDIFKFPTIEQLANMALRME--------KIRYVSIPSAQKISYYPV 3535 Query: 671 GSHAEEEDGLSRTLSFSVDHKFTG--------QLKRIAAA-EHL--KHESILLSMFVYLL 719 S + LS T + + TG L+R+ AA + L +HE + S + L Sbjct: 3536 SSAQKRMYLLSHTEGGELTYNMTGAMSVEGAIDLERLTAAFQKLIERHEVLRTS---FEL 3592 Query: 720 YELSPSARI 728 YE P+ RI Sbjct: 3593 YEGEPAQRI 3601 >gb|EAJ16016.1| unknown [environmental sequence] Length = 513 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 191/499 (38%), Positives = 283/499 (56%), Gaps = 9/499 (1%) Query: 13 ITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFILAFWACILG 72 I FIN +E S+ E L + G +S DE++ ++N F+ FWA ILG Sbjct: 22 IRFINRKSEEEEISFTEFGANIKKCLGLFQDLGFKSNDEIVINTKSNIKFLECFWAAILG 81 Query: 73 GMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSRSLLKPDLTAHQTDFYRFASSITNR 132 GMIPVPV VG +EH+ KL K+ L P LITD+ + D Y + I ++ Sbjct: 82 GMIPVPVAVGVGEEHRKKLFKVLLQLKNPKLITDADVHSRLISLLQTKDKYFSLTDIVSQ 141 Query: 133 TIHTETLEYSGTEDVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNLLTNLYDLKKSRN 192 +I + SG V+ D+AFIQ+SSG+T DPKG+ LTH NL TN+Y + + + Sbjct: 142 SIVDIEFQKSG----VIKESNPEDVAFIQYSSGSTSDPKGIVLTHKNLTTNIYAIAEGLD 197 Query: 193 YSANDSFLSWMPLTHDMGMIVFHLLPLTCGGSQSLLPTWVFIRRPTLWIKKASDLKSTVI 252 +D ++WMPLTHDMG+I H+ + G SQ ++ T +FIR+P LW+ K S+ +++++ Sbjct: 198 LRDDDVGMNWMPLTHDMGLIGTHMTLFSYGLSQIIMDTELFIRKPLLWLVKTSESRASIL 257 Query: 253 ASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAKLCNEFLEVMDKFSLPRTSL 312 SPNFG K+ L R + + DLS VR+L++ AE I LC EFL+ M F L S+ Sbjct: 258 TSPNFGYKHLLRAHKRKKIK-DIDLSCVRLLINGAESISVTLCKEFLDEMSAFQLKEESM 316 Query: 313 LPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIVEENYKDKEYIVSLVDLGNP 372 P YGLAEAT V+ K G +F N+ R ++ + EE+ DK I V G Sbjct: 317 FPVYGLAEATLGVSFPKTGEKFRYINLDRETLKNNN---TCEESDDDKNSI-PFVMHGKA 372 Query: 373 IENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEATRKVFTKDGWLRTGDLGFM 432 + +C ++ D+ + L E + G+++I+G NVT Y +E T ++ DGWL TGD G + Sbjct: 373 LRDCEYKIVDDAGKSLPEKINGNIKIRGANVTKEIYRDENTTNEIIDSDGWLSTGDCGAV 432 Query: 433 KDGSLIVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGVTAACGVYNEQLATEEVILF 492 D +LI+TGR+K+II INGQN+YP DIE + + +G CG N+ +++++F Sbjct: 433 IDNNLIITGRKKEIIIINGQNYYPNDIENIIVQGGNFDLGKIVVCGAINKNTQNDQLLVF 492 Query: 493 VNYKDKPETFVPLAIELRK 511 V YK F +A E+R+ Sbjct: 493 VLYKSDLMVFKSIAEEIRR 511 >gb|AAN32979.1| BarE [Lyngbya majuscula] Length = 1706 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 206/672 (30%), Positives = 347/672 (51%), Gaps = 54/672 (8%) Query: 2 LIARSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNET 61 L+ R+ +KGIT+I D Y SY+++ A L LR ++ D+VI Q+E Sbjct: 41 LLPRAALTNKGITYIQADGSEQYQSYQDLLLDAKRILAGLRQWDLKPQDKVILQLEEGHD 100 Query: 62 FILAFWACILGGMIPVPVNVGNNDEH----KHKLIKIWNVLHRPFLITDSRSLLKPDLTA 117 FI AFW C+LGG IPVP+++ + KL W +L P ++T+ L P++ + Sbjct: 101 FIPAFWGCLLGGFIPVPLSIAPTYQQLNNVTKKLHNAWQMLEHPLILTNRE--LAPEIRS 158 Query: 118 HQTDFYRFASSITNRTIHTETLE----YSGTEDVVLCSPESHDIAFIQFSSGTTGDPKGV 173 ++ + R T +E T+++ P+ ++A + +SG+TG PKGV Sbjct: 159 -------LSTHLNLRDFQTGVIEDLRKQDPTQEIYRGQPD--ELALLLLTSGSTGLPKGV 209 Query: 174 TLTHDNLLTNLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCGGSQSLLPTWVF 233 L+H N+L+ + ++ + L+WMPL H G+I+ +++ + G Q PT Sbjct: 210 MLSHRNILSESAGTIQMNHFDSEAVTLNWMPLDHVGGIIMLNVMAVELGCQQVHAPTKYI 269 Query: 234 IRRPTLWIKKASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAK 293 ++ P W+ ++T+ PNF ++ WDLS++ L++ E I K Sbjct: 270 LQNPLHWLALIERHQATISWGPNFAYSLINDLVQDAEAG-SWDLSSISFLVNGGEQISPK 328 Query: 294 LCNEFLEVMDKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIV 353 + FL++M + L T L P +G++E + +T Q Sbjct: 329 VARRFLKLMKRQGLAETVLRPAFGMSETSGGITWSD---------------------QFS 367 Query: 354 EENYKDKEYIVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEA 413 N D + V LG PI +R+ ++++ ++ E +G +Q+KG +VT+GYY N E Sbjct: 368 LSNTSDD---MPFVGLGLPIPGACLRIVNDDNEIVHEGAIGKLQVKGASVTSGYYQNPEI 424 Query: 414 TRKVFTKDGWLRTGDLGFMKDGSLIVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGV 473 + FT DGW RTGDLG++++G L++TGR+KD+I ING N+ +IE V EE G I Sbjct: 425 NQAAFTADGWFRTGDLGYLENGYLVLTGRDKDVILINGVNYPAHEIEAVVEEVDGVEISF 484 Query: 474 TAACGVY-------NEQLATEEVILFVNYKDKPETFVPLAIELRKQLNLKVGIHVRHIIP 526 TAAC + ++QLA + N + PE L ++R + +GI+ +++P Sbjct: 485 TAACAIQGKTNSSSSDQLAIFFSAVEANIETNPEVLKGLIKKIRGAVVQNIGINPDYLLP 544 Query: 527 VKK--ILKTTSGKVQRYKMKNLFLEGQFTGLLAEMEEVTNTITSRIDA-DQPKDTVEAAL 583 V K I KT GK+QR K+K F G+F L+ + + + S+ A P+ VE + Sbjct: 545 VGKESIPKTAIGKIQRQKLKQQFEAGEFDPLIETVGQSLRIMGSQETALALPQTEVEQVI 604 Query: 584 LSIWANVLGNDRLGVKDNFFEIGGTSTLLAQMFEQVDREYPGKITLTDLFGHPSISKLAG 643 ++IW +VLG D++G+++NFFE+GG S LL + Q+ + ++++ ++F HP+I LA Sbjct: 605 VNIWQDVLGLDKIGLQENFFELGGHSLLLLTLQSQLQESFGKELSIAEMFSHPTIEALAQ 664 Query: 644 LIRQDGSDINAS 655 Q + +A+ Sbjct: 665 YFTQTQPEDSAA 676 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,332,519,929 Number of extensions: 58154224 Number of successful extensions: 156975 Number of sequences better than 1.0e-05: 2447 Number of HSP's gapped: 154673 Number of HSP's successfully gapped: 2886 Length of query: 865 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 731 Effective length of database: 393,414,312 Effective search space: 287585862072 Effective search space used: 287585862072 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)