BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0560.0003.p
         (86 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_267443.1| acetyltransferase [Lactococcus lactis subsp. la...    95   4e-19
ref|NP_810376.1| putative acetyltransferase [Bacteroides thetaio...    61   1e-08
ref|NP_464191.1| similar to acetyl transferase [Listeria monocyt...    59   5e-08
ref|NP_470012.1| similar to acetyl transferase [Listeria innocua...    56   3e-07
gb|EAK16594.1| unknown [environmental sequence]                        55   7e-07

>ref|NP_267443.1| acetyltransferase [Lactococcus lactis subsp. lactis]
 pir||G86785 acetyltransferase [imported] - Lactococcus lactis subsp. lactis
          (strain IL1403)
 gb|AAK05385.1| acetyltransferase [Lactococcus lactis subsp. lactis]
          Length = 203

 Score = 95.1 bits (235), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 56/80 (70%)

Query: 1  MNISEIKQMINSGKMYDDAAKDISALRTQAISTCRKYNYKVNTNDEYDMSILKGLFAEVG 60
          MN  ++K +INSGK YDDA  D+S  R  A+   R+YN K+N N+ Y   IL+ LF  +G
Sbjct: 1  MNKKQLKTLINSGKTYDDADLDLSEYRNHALFESRRYNQKINNNEGYHPEILENLFEHLG 60

Query: 61 ENVYIESDFRCEFGFNISIG 80
          +N YIES+FRCEFGFNI IG
Sbjct: 61 KNPYIESNFRCEFGFNIRIG 80


>ref|NP_810376.1| putative acetyltransferase [Bacteroides thetaiotaomicron
          VPI-5482]
 gb|AAO76570.1| putative acetyltransferase [Bacteroides thetaiotaomicron
          VPI-5482]
          Length = 187

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query: 12 SGKMYDDAAKDISALRTQAISTCRKYNYKVNTNDEYDMSILKGLFAEVGENVYIESDFRC 71
          SGKMY+D + ++   R QA+     YN       E   ++L+ L   +G +V+ E +FRC
Sbjct: 3  SGKMYNDLSVELVQRREQAVFLTNDYNSTYGKPKEVREALLRKLLRCIGSSVHFEPNFRC 62

Query: 72 EFGFNISIG 80
          EFGFNISIG
Sbjct: 63 EFGFNISIG 71


>ref|NP_464191.1| similar to acetyl transferase [Listeria monocytogenes EGD-e]
 pir||AH1157 acetyl transferase homolog lmo0664 [imported] - Listeria
          monocytogenes (strain EGD-e)
 emb|CAC98742.1| lmo0664 [Listeria monocytogenes]
          Length = 187

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 4  SEIKQMINSGKMYDDAAKDISALRTQAISTCRKYNYKVNTNDEYDMSILKGLFAEVGENV 63
          +E+++MI +G+MYD + ++++  R +A   CR+ N  +++  E   S+LK LF    ENV
Sbjct: 3  TELEKMI-AGEMYDPSDRELAHGRNRARKFCREINDAMDS--ESRASVLKRLFGGTKENV 59

Query: 64 YIESDFRCEFGFNISIG 80
          Y+E DFR ++G NI +G
Sbjct: 60 YVEPDFRVDYGSNIYVG 76


>ref|NP_470012.1| similar to acetyl transferase [Listeria innocua]
 pir||AE1516 acetyl transferase homolog lin0669 [imported] - Listeria innocua
          (strain Clip11262)
 emb|CAC95901.1| lin0669 [Listeria innocua]
          Length = 187

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 4  SEIKQMINSGKMYDDAAKDISALRTQAISTCRKYNYKVNTNDEYDMSILKGLFAEVGENV 63
          +E+++MI +G+MY+ + +++   R++A   CR+ N  +++  E   S+LK LF    ENV
Sbjct: 3  TELEKMI-AGEMYNPSDRELVHGRSRARKFCREINDTMDS--ESRKSVLKRLFGGTKENV 59

Query: 64 YIESDFRCEFGFNISIG 80
          Y+E DFR ++G NI +G
Sbjct: 60 YVEPDFRVDYGSNIYVG 76


>gb|EAK16594.1| unknown [environmental sequence]
          Length = 187

 Score = 54.7 bits (130), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 3  ISEIKQMINSGKMYDDAAKDISALRTQAISTCRKYNYKVNTNDEYDMSILKGLFAEVGEN 62
          ++E ++M+ +G +Y  + K +SALR Q      + N    ++ +    +LKGLF   G+ 
Sbjct: 1  MTEQEKML-AGDLYFPSDKTLSALRKQCRMQLDELNTTCQSDHKKRTRLLKGLFGSTGKR 59

Query: 63 VYIESDFRCEFGFNISIG 80
          +YIES F+C++G NI +G
Sbjct: 60 LYIESSFKCDYGENIHVG 77


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.319    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 109,990,328
Number of extensions: 3599147
Number of successful extensions: 9972
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 9990
Number of HSP's successfully gapped: 7
Length of query: 86
Length of database: 757,237,578
Length adjustment: 55
Effective length of query: 31
Effective length of database: 607,907,133
Effective search space: 18845121123
Effective search space used: 18845121123
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 120 (50.8 bits)