BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0076.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_243357.1| 3-oxoacyl-(acyl-carrier protein) reductase [Bac... 317 2e-85 ref|NP_389473.1| 3-ketoacyl-acyl carrier protein reductase [Baci... 311 1e-83 gb|AAC44307.1| 3-ketoacyl-acyl carrier protein reductase 310 1e-83 gb|AAN87388.1| 3-oxoacyl-[acyl-carrier protein] reductase [Helio... 303 3e-81 ref|NP_833570.1| 3-oxoacyl-[acyl-carrier protein] reductase [Bac... 294 1e-78 >ref|NP_243357.1| 3-oxoacyl-(acyl-carrier protein) reductase [Bacillus halodurans] pir||C83961 3-oxoacyl-(acyl-carrier protein) reductase fabG [imported] - Bacillus halodurans (strain C-125) dbj|BAB06210.1| 3-oxoacyl-(acyl-carrier protein) reductase [Bacillus halodurans] Length = 246 Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 195/245 (79%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 L+G+TA+VTG SRGIGR+ A++LA HG V VNY+GN+ A++ VA I ELG EAIAI+ Sbjct: 2 LQGKTAIVTGASRGIGRATAMELARHGANVVVNYAGNKEKAEKVVAEIKELGVEAIAIQA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV +S+ ++MVKE IDT+G +DILVNNAGITRDNL MRMKEE++D VI+TNLKGVF+C Sbjct: 62 DVADSESVQAMVKETIDTFGAVDILVNNAGITRDNLFMRMKEEDWDAVIDTNLKGVFHCS 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ TRPMMKQR+GR AGQ NY AAKAG+IG+TK+ AREL++R ITVN Sbjct: 122 KAVTRPMMKQRFGRIINVSSVVGAIGNAGQANYVAAKAGVIGLTKTLARELANRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 +APGFI+T+MT +L ++V+++ + IPLARLG+PE++A V FLAS+ A+Y+TGQT+HV+ Sbjct: 182 VAPGFIETDMTGELPEDVKAQMLGQIPLARLGQPEEVAKAVRFLASDDASYLTGQTIHVN 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 >ref|NP_389473.1| 3-ketoacyl-acyl carrier protein reductase [Bacillus subtilis] sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase) pir||A69621 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) [validated] - Bacillus subtilis emb|CAB13464.1| beta-ketoacyl-acyl carrier protein reductase [Bacillus subtilis subsp. subtilis str. 168] Length = 246 Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 180/245 (73%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 L +TA+VTG SRGIGRSIAL LA+ G V VNYSGNEA A E V I +G +AIA++ Sbjct: 2 LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV N + ++M+KE + + IDILVNNAGITRDNLIMRMKE+E+D VI NLKGVFNC Sbjct: 62 DVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCT 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ TR MMKQR GR GQ NY AAKAG+IG+TKS+A+EL+SR ITVN Sbjct: 122 KAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 IAPGFI T+MT +L+ +V+ E +K IPLAR G P D++ V FLASEGA YMTGQTLH+D Sbjct: 182 IAPGFISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHID 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 >gb|AAC44307.1| 3-ketoacyl-acyl carrier protein reductase Length = 246 Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 180/245 (73%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 L +TA+VTG SRGIGRSIAL LA+ G V VNYSGNEA A E V I +G +AIA++ Sbjct: 2 LNDKTAIVTGASRGIGRSIALALAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV N + ++M+KE + + IDILVNNAGITRDNLIMRMKE+E+D VI NLKGVFNC Sbjct: 62 DVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCT 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ TR MMKQR GR GQ NY AAKAG+IG+TKS+A+EL+SR ITVN Sbjct: 122 KAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 IAPGFI T+MT +L+ +V+ E +K IPLAR G P D++ V FLASEGA YMTGQTLH+D Sbjct: 182 IAPGFISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHID 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 >gb|AAN87388.1| 3-oxoacyl-[acyl-carrier protein] reductase [Heliobacillus mobilis] Length = 257 Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 148/242 (61%), Positives = 184/242 (76%) Query: 8 QTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRGDVG 67 +TALVTG SRGIGR+IALQLA G VAVNY+G+EA A E V II G +A AI+GDV Sbjct: 15 RTALVTGASRGIGRAIALQLAADGFAVAVNYAGSEAKANEVVEEIISAGGKAFAIQGDVS 74 Query: 68 NSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCLKSA 127 S Q + MV++V+ +G+ID+LVNNAGITRDNL+MR+KEE++D V++TNLKG+F C KSA Sbjct: 75 RSDQVDEMVQKVLAEFGRIDVLVNNAGITRDNLLMRLKEEDWDAVLDTNLKGLFLCSKSA 134 Query: 128 TRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNCIAP 187 +PM+KQR GR AGQ NY+AAKAG+IG+TK+ A+EL SR ITVN +AP Sbjct: 135 IKPMIKQRSGRIINITSVVGQMGNAGQGNYAAAKAGVIGLTKTLAKELGSRNITVNAVAP 194 Query: 188 GFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVDGGM 247 G+I T+MT +LSDEVR K IPL RLG+PED+A V FLASE A Y+TGQT++VDGGM Sbjct: 195 GYIQTDMTDKLSDEVRESLAKTIPLGRLGQPEDVAKVVAFLASESAKYITGQTINVDGGM 254 Query: 248 YM 249 M Sbjct: 255 VM 256 >ref|NP_833570.1| 3-oxoacyl-[acyl-carrier protein] reductase [Bacillus cereus ATCC 14579] gb|AAP10771.1| 3-oxoacyl-[acyl-carrier protein] reductase [Bacillus cereus ATCC 14579] Length = 246 Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 141/245 (57%), Positives = 182/245 (74%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 LKG+ ALVTG SRGIGR+IA+ LA+ G V VNY+GNE A E V I +LGS+AIA+R Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV N+ +MVK+ +DT+G++DILVNNAG+T+DNL+MRMKEEE+D VI TNLKGVF C Sbjct: 62 DVANADDVTNMVKQTVDTFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCT 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ +R MM+QR+GR GQ NY AAKAG+IG+TK++A+EL+SR ITVN Sbjct: 122 KAVSRYMMRQRHGRIINIASVVGVIGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 IAPGFI T+MT L + +++E +K IP A+ G +DIA V F AS+ + Y+TGQTL+VD Sbjct: 182 IAPGFIATDMTDVLDENIKAEMLKVIPAAQFGEAKDIANAVTFFASDQSKYVTGQTLNVD 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.132 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 300,342,832 Number of extensions: 10421944 Number of successful extensions: 70774 Number of sequences better than 1.0e-05: 9025 Number of HSP's gapped: 57211 Number of HSP's successfully gapped: 9075 Length of query: 249 Length of database: 757,237,578 Length adjustment: 123 Effective length of query: 126 Effective length of database: 423,280,401 Effective search space: 53333330526 Effective search space used: 53333330526 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 124 (52.4 bits)