BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0042.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_655477.1| RHOD, Rhodanese Homology Domain [Bacillus anthr... 296 5e-79 ref|NP_978026.1| rhodanese-like domain protein [Bacillus cereus ... 295 1e-78 ref|NP_831354.1| Thiosulfate sulfurtransferase [Bacillus cereus ... 288 1e-76 ref|NP_691453.1| thiosulfate sulfurtransferase [Oceanobacillus i... 285 1e-75 ref|NP_487958.1| thiosulfate sulfurtransferase [Nostoc sp. PCC 7... 266 6e-70 >ref|NP_655477.1| RHOD, Rhodanese Homology Domain [Bacillus anthracis A2012] ref|NP_844048.1| rhodanese-like domain protein [Bacillus anthracis str. Ames] gb|AAP25534.1| rhodanese-like domain protein [Bacillus anthracis str. Ames] Length = 277 Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 145/285 (50%), Positives = 181/285 (63%), Gaps = 10/285 (3%) Query: 29 VTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVGEHGG 88 VT WL + + I+DCRF L P GRE YE+EHIP A+Y DL DLSSPV EHGG Sbjct: 3 VTVEWLREHIEDENVRIIDCRFDLANPNWGREKYEEEHIPYALYFDLNVDLSSPVTEHGG 62 Query: 89 RHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEGGFSA 148 RHPLP+ + A +L++ GI ++AYD E+G NA+RLWWLL Y+GHE V+IL+GGF A Sbjct: 63 RHPLPNVEEFADKLSQAGIDEHMTVIAYDSEAGANASRLWWLLNYVGHEKVYILDGGFPA 122 Query: 149 WKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXXXIDS 208 WK P+T PV + +F+ +Q ML + VR IDS Sbjct: 123 WKENGLPITPEIPVVIRKTFKANIQDHMLVTMETVRE----------NIDAGKDVTLIDS 172 Query: 209 RAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAEIIVY 268 R +RY G+EE +D KAGHIP AVN+FWK+ G K+ Q QE F L KD E IVY Sbjct: 173 REPKRYAGVEELVDPKAGHIPTAVNYFWKDGMLQSGQFKNEAQQQERFQNLSKDKETIVY 232 Query: 269 CGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 CGSGVTACPN++AL+ AG++NV+LY GSWSDWISY N IA E+ Sbjct: 233 CGSGVTACPNIVALKLAGFQNVKLYAGSWSDWISYPENQIAKEED 277 >ref|NP_978026.1| rhodanese-like domain protein [Bacillus cereus ATCC 10987] gb|AAS40634.1| rhodanese-like domain protein [Bacillus cereus ATCC 10987] Length = 277 Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 145/285 (50%), Positives = 181/285 (63%), Gaps = 10/285 (3%) Query: 29 VTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVGEHGG 88 VT WL + + I+DCRF L P GRE YE+EHIP A+Y DL DLSSP+ EHGG Sbjct: 3 VTVEWLREHIKDENVRIIDCRFDLANPNWGREKYEEEHIPHALYFDLNVDLSSPITEHGG 62 Query: 89 RHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEGGFSA 148 RHPLP+ + A +L++ GI ++++AYD E+G NA+RLWWLL Y+GHE V+IL+GGF A Sbjct: 63 RHPLPNIEEFADKLSQAGIDEHTKVIAYDSEAGANASRLWWLLNYVGHEKVYILDGGFPA 122 Query: 149 WKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXXXIDS 208 WK PVT V +F+ VQ ML + VR IDS Sbjct: 123 WKENGLPVTTEISVAKRKAFKANVQNHMLVTMETVRE----------NIYAGADVTLIDS 172 Query: 209 RAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAEIIVY 268 R +RY G+EE +D KAGHIP AVN+FWK+ G K+ Q QE F L KD E IVY Sbjct: 173 REPKRYAGVEELVDPKAGHIPTAVNYFWKDGMLQSGQFKNEAQQQERFQNLSKDKETIVY 232 Query: 269 CGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 CGSGVTACPN++AL+ AG++NV+LY GSWSDWISY N IA E+ Sbjct: 233 CGSGVTACPNIVALKLAGFQNVKLYAGSWSDWISYPENQIAKEED 277 >ref|NP_831354.1| Thiosulfate sulfurtransferase [Bacillus cereus ATCC 14579] gb|AAP08555.1| Thiosulfate sulfurtransferase [Bacillus cereus ATCC 14579] Length = 277 Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 141/285 (49%), Positives = 177/285 (62%), Gaps = 10/285 (3%) Query: 29 VTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVGEHGG 88 VT WL + + I+DCRF L P GRE YE+ HIP A+Y DL DLSSP+ EHGG Sbjct: 3 VTVEWLREHIEDENVRIIDCRFDLANPNWGREKYEEGHIPHALYFDLNLDLSSPIAEHGG 62 Query: 89 RHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEGGFSA 148 RHPLP+ + A +L++ GI + ++AYD ++G NAARLWWL Y+GHE V+IL+GGF A Sbjct: 63 RHPLPNIEEFADKLSEAGIDEHTTVIAYDSQAGANAARLWWLCNYVGHEKVYILDGGFPA 122 Query: 149 WKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXXXIDS 208 WK P T PV + +F+ +Q ML + VR IDS Sbjct: 123 WKENGLPTTTEIPVVIRKTFKTNIQDHMLVTMETVRE----------NIRAGADVTLIDS 172 Query: 209 RAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAEIIVY 268 R +RY G+EE +D KAGHIP AVN FWK+ G K+ QE F L KD E IVY Sbjct: 173 REPKRYAGVEELVDHKAGHIPTAVNHFWKDGMLQSGQFKNGAGQQERFQNLSKDKETIVY 232 Query: 269 CGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 CGSGVTACPN++AL+ AG++NV+LY GSWSDWISY N IA E+ Sbjct: 233 CGSGVTACPNIVALKLAGFQNVKLYAGSWSDWISYPENQIAKEED 277 >ref|NP_691453.1| thiosulfate sulfurtransferase [Oceanobacillus iheyensis HTE831] dbj|BAC12488.1| thiosulfate sulfurtransferase [Oceanobacillus iheyensis HTE831] Length = 281 Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 187/290 (64%), Gaps = 12/290 (4%) Query: 25 MDATVTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVG 84 M ++ + L+ R + + IVD RF L P+AGR++Y +EHIPGA+Y+DL DLS G Sbjct: 1 MKNLISVQRLMRRFSQNQIVIVDVRFDLQDPDAGRKAYLKEHIPGAIYMDLNKDLSGKAG 60 Query: 85 EHGGRHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEG 144 +HGG HPLPD ++ A +L ++GI N + +V YD + M A R WWL+ Y+GH+ V+ILEG Sbjct: 61 KHGGNHPLPDWELFANKLGQIGITNETIVVVYDQGNDMFAPRFWWLMDYVGHDKVYILEG 120 Query: 145 GFSAWKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXX 204 G WK E VT P P ++ P+++ D+ EVR Sbjct: 121 GLDQWKEEGGVVTTEIPSLTPVTYHPRMKQNRTVDMKEVR-----------DKITNGNTV 169 Query: 205 XIDSRAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSV-KSAEQLQEHFAGLDKDA 263 IDSR++ RYLG EE L ++AGHIPGAVN+FWK+ +DG+ K EQL+ FA L KD Sbjct: 170 LIDSRSYPRYLGDEEPLYRRAGHIPGAVNYFWKDVLTSDGTRWKDKEQLENLFANLSKDD 229 Query: 264 EIIVYCGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 EIIV CGSGV+ACPN+LALE AG+ NV+LYPGS+SDWISY+ N + GEE Sbjct: 230 EIIVSCGSGVSACPNILALEAAGFHNVKLYPGSFSDWISYDENDVKVGEE 279 >ref|NP_487958.1| thiosulfate sulfurtransferase [Nostoc sp. PCC 7120] pir||AG2295 thiosulfate sulfurtransferase [imported] - Nostoc sp. (strain PCC 7120) dbj|BAB75617.1| thiosulfate sulfurtransferase [Nostoc sp. PCC 7120] Length = 277 Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 134/287 (46%), Positives = 177/287 (61%), Gaps = 14/287 (4%) Query: 20 EEGILMDA--TVTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEH 77 E+ ++ D V+ WLL L+ + IVDCRF+L P+ G++ Y+ HI GA YLDL Sbjct: 2 EKSLMTDTQLVVSSSWLLQNLHNIDVVIVDCRFSLADPQLGKQQYQTSHIEGAYYLDLNL 61 Query: 78 DLSSPVGEHGGRHPLPDPQVLAARLAKLGIG-NGSRIVAYDDESGMNAARLWWLLRYLGH 136 DLSSPVGEHGGRHPLP+P LA +LA +GI + +VAYDD A+RLWWLLRYLGH Sbjct: 62 DLSSPVGEHGGRHPLPNPDELAQKLASMGIEFQKTLVVAYDDSRFAFASRLWWLLRYLGH 121 Query: 137 ENVFILEGGFSAWKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXX 196 E V +L GGFS W+ +P+TD P ++F P++Q Q+L D+ +V+ + Sbjct: 122 EQVAVLNGGFSQWEQAGYPITDVIPQLKTANFVPQIQTQLLVDIEDVKNRKD-------- 173 Query: 197 XXXXXXXXXIDSRAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHF 256 +DSR +RY G E +DK AGHI GAVN+ W ++ G + Q+ + Sbjct: 174 ---LPTVVLVDSRESDRYRGEREPIDKIAGHIAGAVNYPWMEVTDSSGYSIPLTKHQQRW 230 Query: 257 AGLDKDAEIIVYCGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISY 303 L EI+VYCGSGVTAC N+L+LE AG +LY GSWSDWISY Sbjct: 231 QNLATAEEILVYCGSGVTACVNLLSLEVAGIHTGKLYAGSWSDWISY 277 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 487,865,868 Number of extensions: 20504002 Number of successful extensions: 46489 Number of sequences better than 1.0e-05: 492 Number of HSP's gapped: 45467 Number of HSP's successfully gapped: 522 Length of query: 316 Length of database: 757,237,578 Length adjustment: 125 Effective length of query: 191 Effective length of database: 417,850,203 Effective search space: 79809388773 Effective search space used: 79809388773 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)