BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0557.0030.p
         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_00103844.1| COG3315: O-Methyltransferase involved in poly...    93   2e-18
ref|NP_692160.1| hypothetical protein OB1239 [Oceanobacillus ihe...    67   1e-10
ref|NP_832960.1| hypothetical protein [Bacillus cereus ATCC 1457...    60   2e-08
ref|NP_979565.1| conserved hypothetical protein [Bacillus cereus...    59   4e-08
ref|NP_845552.1| conserved hypothetical protein [Bacillus anthra...    59   5e-08

>ref|ZP_00103844.1| COG3315: O-Methyltransferase involved in polyketide biosynthesis
          [Desulfitobacterium hafniense]
          Length = 307

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 57/71 (80%)

Query: 1  MKNESFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          M+ +S TALVS FSRAYHAE+N++KIF+DS+AR  L++EEY  I+ +M++GI FF P F 
Sbjct: 4  MEQKSVTALVSTFSRAYHAENNEVKIFNDSMARLFLSEEEYGQISKNMAEGIGFFNPSFK 63

Query: 61 GTQEQALRRVV 71
          GT ++ALR VV
Sbjct: 64 GTPDEALRWVV 74


>ref|NP_692160.1| hypothetical protein OB1239 [Oceanobacillus iheyensis HTE831]
 dbj|BAC13195.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 305

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 1/60 (1%)

Query: 2  KNES-FTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          KNES  T+L+SAF RAYH++++  KIFDD +A+ L+T++E+E I  +M QGI FF  E A
Sbjct: 3  KNESSLTSLISAFGRAYHSKYDTPKIFDDYIAKDLITQKEFEDIRKNMIQGIQFFNHEIA 62


>ref|NP_832960.1| hypothetical protein [Bacillus cereus ATCC 14579]
 gb|AAP10161.1| hypothetical protein [Bacillus cereus ATCC 14579]
          Length = 306

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 40/56 (71%)

Query: 5  SFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          S T+LVSAFSRAYH+E +  KIFDD +A++ ++ +E   I ++M QGI FF  + A
Sbjct: 9  SVTSLVSAFSRAYHSEFDNPKIFDDYVAKEFISPKERINIETNMVQGIHFFNTDIA 64


>ref|NP_979565.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gb|AAS42173.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
          Length = 306

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 5  SFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          S T+LVSAF RAYH+E +  KIFDD +A++ ++ +E   I ++M QGI FF  + A
Sbjct: 9  SITSLVSAFGRAYHSEFDSPKIFDDYVAKEFISPKERSDIETNMVQGIHFFNTDIA 64


>ref|NP_845552.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gb|AAP27038.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
          Length = 306

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 5  SFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          S T+LVSAF RAYH+E +  KIFDD +A++ ++++E   I  +M QGI FF  + A
Sbjct: 9  SITSLVSAFGRAYHSEFDNPKIFDDYVAKEFISQKERNDIEMNMVQGIHFFNTDIA 64


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.322    0.133    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 98,791,868
Number of extensions: 2515429
Number of successful extensions: 6170
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 6170
Number of HSP's successfully gapped: 7
Length of query: 101
Length of database: 757,237,578
Length adjustment: 68
Effective length of query: 33
Effective length of database: 572,610,846
Effective search space: 18896157918
Effective search space used: 18896157918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 120 (50.8 bits)