BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0005.p (721 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_814965.1| glycosyl hydrolase, family 3 [Enterococcus faec... 760 0.0 ref|NP_471175.1| similar to beta-glucosidases [Listeria innocua]... 618 e-175 ref|NP_419921.1| periplasmic beta-glucosidase [Caulobacter cresc... 541 e-152 ref|NP_644175.1| beta-glucosidase [Xanthomonas axonopodis pv. ci... 523 e-147 ref|NP_639159.1| beta-glucosidase [Xanthomonas campestris pv. ca... 518 e-145 >ref|NP_814965.1| glycosyl hydrolase, family 3 [Enterococcus faecalis V583] gb|AAO81035.1| glycosyl hydrolase, family 3 [Enterococcus faecalis V583] Length = 716 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/720 (52%), Positives = 497/720 (69%), Gaps = 6/720 (0%) Query: 1 MTEHLYHKYVKHMTLEEKIAQLLQLAAPFYDEPGDESEITGPMEELGIKYDTKRAVGSVL 60 M E+ + V+ MT++EKI QLLQLAA FY + +E TGPM ELG+ +T G+ L Sbjct: 1 MKENQLIQLVEEMTIDEKINQLLQLAAAFYSDKAEEK--TGPMSELGLSQETIDTAGTTL 58 Query: 61 GIAGAKKMMAVQKEHLAGSRLGIPLLFMADIVHGFKTIFPIPLAIGCSWDPELAEQSAGI 120 G++GA + VQKE++ RL IP L MADI+HGF+TIFPIPLA+G +WD E+ A I Sbjct: 59 GVSGANEAKRVQKEYMQNHRLNIPTLLMADIIHGFRTIFPIPLALGSTWDEAAVEKMAEI 118 Query: 121 AARESAVSGLHVTFAPMVDLVRDARWGRVMESTGEDPYLNAVFAKAFVQGFQGDNLKDDV 180 +A+E+AVSGLHVTF+PMVDLVRD RWGRVMESTGEDP LN+ A A V+G+QG+NLK+D Sbjct: 119 SAKEAAVSGLHVTFSPMVDLVRDPRWGRVMESTGEDPLLNSRLAAAMVRGYQGENLKEDN 178 Query: 181 SRVAACVKHFAAYGLVEGGREYNTVDLSERQLREYYLPAYKAAVDAGVEMVMTSFNTVNG 240 RVAACVKHFAAYG GR+YNTVD+SERQLRE YLP YKA +DAG ++VMTSFNTV+G Sbjct: 179 WRVAACVKHFAAYGGALAGRDYNTVDMSERQLREMYLPGYKAGLDAGAKLVMTSFNTVDG 238 Query: 241 IPATGNRSLMRGLLRDEWGFDGVVISDWAAIKEIIAHGXXXXXXXXXXXXISSGVDIDMM 300 IPATGN+ L R +LR+E+GF+GVVISDW AIKE+I HG I +GVDI+MM Sbjct: 239 IPATGNQWLFRDVLRNEFGFEGVVISDWGAIKELIPHGVAKDEKQAAELAIKAGVDIEMM 298 Query: 301 TTSYVNHLPELVAEGLVDEALIDEAVLRILVLKEKLGLFENPMRGADPELEQQIVYSQEH 360 TT Y ++L EL+ EG + E LIDEAV+RIL LK +LGLFENP RGAD + E +++ S+EH Sbjct: 299 TTCYPDYLKELLEEGRIAETLIDEAVMRILKLKNELGLFENPYRGADEQAEAEVILSKEH 358 Query: 361 RKVAQRLAEKSSVLLKNDGVLPLQAGQRVALIGPFAASGDILGWWSWQGSQETAVQLGES 420 R++A+++A+KS VLLKN+ +LP +++AL+GP A S DILG WSWQG +E A+ L Sbjct: 359 REIAKKIAQKSMVLLKNENILPFTPQEKIALVGPGAQSQDILGAWSWQGKKEEAISLVAG 418 Query: 421 MQKVSGDPGHVLISEGCSIDTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDI 480 QK++ + ++ E T RSDI Sbjct: 419 AQKLTTN--LLVAQEPFDYFEPTAAAIEEALTLASQADKVVVALGETDWMSGEAASRSDI 476 Query: 481 RLPEAQLELVREMKKLGKPVVAVLFNGRPLDLHGVYDVADAVLEAWFPGSEGGAALADIL 540 RLPE QL +V ++ + VV +++GRPLDL G+ DVA +++AW PG+EGG ALA+IL Sbjct: 477 RLPEKQLAVVAQIIEKNPNVVVTVYSGRPLDLQGI-DVAKGIVQAWQPGTEGGNALAEIL 535 Query: 541 YGKVNPSGRLSMSFPYSAGQIPVYYNAYNTGRPKPVEHTDNRYISQYIDIPNEPLLPFGF 600 +G+ NPSGRLSMSFP + GQ+P++YN NTGRP + +Y+S+Y+D+ N PFGF Sbjct: 536 WGQYNPSGRLSMSFPETVGQVPIFYNVDNTGRPYE-SAPEEKYVSKYLDVSNYAKYPFGF 594 Query: 601 GLSYTTFAFEGFSLSSDCLSADRPLEARVTVTNTGSMAGTETVQLYIRDMSGETVRPVKE 660 GLSY+ F+++ LS+ + ++P+ V V N +AG ETVQ Y+RD+ G+ VRP+KE Sbjct: 595 GLSYSHFSYQPIQLSALTFTKEQPVTVSVLVRNNSPIAGEETVQFYVRDLVGQVVRPIKE 654 Query: 661 LKDFRQVQLLPGESRDVVFQIEESLLRYHHSDLTFSSDPGMFTVYVGANSRDTQSATFRL 720 LKDF++V L P E ++V F + E ++RY HSD +SD G F V +G NSRD Q+AT L Sbjct: 655 LKDFQKVWLEPKEEKEVQFLLSEDMVRYVHSDNQVTSDAGEFIVMIGGNSRDVQTATVTL 714 >ref|NP_471175.1| similar to beta-glucosidases [Listeria innocua] pir||AG1662 beta-glucosidases homolog lin1840 [imported] - Listeria innocua (strain Clip11262) emb|CAC97071.1| lin1840 [Listeria innocua] Length = 723 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 317/716 (44%), Positives = 446/716 (62%), Gaps = 9/716 (1%) Query: 1 MTEHLYHKYVKHMTLEEKIAQLLQLAAPFYDEPGDESEITGPM-EELGIKYDTKRAVGSV 59 M + + V MTL+EKIAQ LQL+ + +E+TGP+ +E+ + GSV Sbjct: 1 MKQEKVQELVSQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSV 60 Query: 60 LGIAGAKKMMAVQKEHLAGSRLGIPLLFMADIVHGFKTIFPIPLAIGCSWDPELAEQSAG 119 LG + A M+ +Q+ +L +RLGIPL+FMAD++HG+KT+FPIPLA+GCS+D E A Sbjct: 61 LGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAE 120 Query: 120 IAARESAVSGLHVTFAPMVDLVRDARWGRVMESTGEDPYLNAVFAKAFVQGFQGD--NLK 177 ++A E+ G HVTF+PM+DLVRD RWGRVMESTGEDP+LN+ KA V G+QGD L Sbjct: 121 VSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFLNSELGKAMVDGYQGDASKLN 180 Query: 178 DDVSRVAACVKHFAAYGLVEGGREYNTVDLSERQLREYYLPAYKAAVDAGVEMVMTSFNT 237 +++ ++AACVKHFAAYG E G EYNTV++S R+L + YLPAY AA+ AG ++VMT+FN Sbjct: 181 ENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNV 240 Query: 238 VNGIPATGNRSLMRGLLRDEWGFDGVVISDWAAIKEIIAHGXXXXXXXXXXXXISSGVDI 297 V+GIPAT N+ L R +LR E FDGV+ISDW A+ E+I HG + +GVD+ Sbjct: 241 VDGIPATMNKWLNRDVLRGEMEFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDL 300 Query: 298 DMMTTSYVNHLPELVAEGLVDEALIDEAVLRILVLKEKLGLFENPMRGADPELEQQIVYS 357 +MMTT Y++ L L+ EG + E L+DEAVLR+L LK LGLFE+P RG + + + Sbjct: 301 EMMTTCYIHELKGLIEEGKLSENLLDEAVLRMLNLKNDLGLFEDPYRGLKNNDRTKDILT 360 Query: 358 QEHRKVAQRLAEKSSVLLKNDG-VLPLQAGQRVALIGPFAASGDILGWWSWQGSQETAVQ 416 E R A+ +S+VLL+N +LPL ++AL+GP A S DILG W+ G ++ + Sbjct: 361 DESRGKARAAGVESAVLLENKSRLLPLAKEAKIALVGPLATSPDILGGWNVYGEEKDGIN 420 Query: 417 LGESMQKVSGDPGHVLISEGCSIDTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 476 + +++V + V+ +E ++ Sbjct: 421 VETGLREVF-ETVEVVSTEYTE---LSEEDKVAVKAAVQNMDVVVLALGEKNEWGGEAGS 476 Query: 477 RSDIRLPEAQLELVREMKKLGKPVVAVLFNGRPLDLHGVYDVADAVLEAWFPGSEGGAAL 536 + IRLPEAQ +L + ++ LGKPVV LFNGRPL++ + + +DA+LE WFPG+E G Sbjct: 477 LATIRLPEAQYQLAKFVQTLGKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVT 536 Query: 537 ADILYGKVNPSGRLSMSFPYSAGQIPVYYNAYNTGRPKPVEHTDNRYISQYIDIPNEPLL 596 AD+L G NPSG+LSMSFP + GQIPVYYN TGRP+ E+ RY+S Y+DIPNEP Sbjct: 537 ADLLSGASNPSGKLSMSFPQTTGQIPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFY 596 Query: 597 PFGFGLSYTTFAFEGFSLSSDCLSADRPLEARVTVTNTGSMAGTETVQLYIRDMSGETVR 656 PFG+G SY+ F + SL + L+ L VT+ N +AG E +Q+Y++D++ R Sbjct: 597 PFGYGKSYSEFELKTSSLPKE-LNLGESLHVEVTIKNISDIAGKEVIQVYLQDVTASISR 655 Query: 657 PVKELKDFRQVQLLPGESRDVVFQIEESLLRYHHSDLTFSSDPGMFTVYVGANSRD 712 PVKELK F +V L GE + V F++ +++ L +PG+ V+VG +S D Sbjct: 656 PVKELKAFEKVALQAGEEKTVTFELTSEAFSFYNHQLEKVQEPGLHRVFVGTSSED 711 >ref|NP_419921.1| periplasmic beta-glucosidase [Caulobacter crescentus CB15] pir||E87386 periplasmic beta-glucosidase [imported] - Caulobacter crescentus gb|AAK23089.1| periplasmic beta-glucosidase [Caulobacter crescentus CB15] Length = 743 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 301/717 (41%), Positives = 417/717 (58%), Gaps = 6/717 (0%) Query: 10 VKHMTLEEKIAQLLQLAAPFYDEPGDESEITGPMEELGIKYDTKRA-VGSVLGIAGAKKM 68 + MTLEEK QL A GD + + + + K +G+++ GA+ Sbjct: 23 LAQMTLEEKAGQLSCFADMIRPPIGDINPLVNIRNAQTLIAEIKAGRIGTLINGVGAQAA 82 Query: 69 MAVQKEHLAGSRLGIPLLFMADIVHGFKTIFPIPLAIGCSWDPELAEQSAGIAARESAVS 128 + QK + GSRL IPLLF AD++HGF+T++PI LA S+DP LAE++A AA E++ S Sbjct: 83 LDTQKAAVEGSRLKIPLLFAADVIHGFRTVYPISLAEAASFDPHLAERTARAAAVEASAS 142 Query: 129 GLHVTFAPMVDLVRDARWGRVMESTGEDPYLNAVFAKAFVQGFQGDNLKDDVSRVAACVK 188 GLH TFAPMVD+ RD RWGRV E +GED YL V A A V+GFQG +L+ + S +A K Sbjct: 143 GLHWTFAPMVDVARDQRWGRVAEGSGEDVYLGEVMAAARVRGFQGRDLRAEDSMLA-TPK 201 Query: 189 HFAAYGLVEGGREYNTVDLSERQLREYYLPAYKAAVDAGVEMVMTSFNTVNGIPATGNRS 248 HFA YG V G EYN+V++SE LRE +LP ++A+ AG M++FN +NGIPAT NR Sbjct: 202 HFAGYGAVMAGMEYNSVEMSEATLRETHLPPFQASFAAGAMTTMSAFNDINGIPATANRR 261 Query: 249 LMRGLLRDEWGFDGVVISDWAAIKEIIAHGXXXXXXXXXXXXISSGVDIDMMTTSYVNHL 308 L+ +LR EWGF GVVISD+ A +E++AHG I +G+DI M + Y +L Sbjct: 262 LLTDILRGEWGFKGVVISDYTADQELVAHGYAADDRDAARLAILAGIDISMQSGLYNRYL 321 Query: 309 PELVAEGLVDEALIDEAVLRILVLKEKLGLFENPMRGADPELEQQIVYSQEHRKVAQRLA 368 PELV G V +D+AV R+L LKE +GLF+NP R DPE+E++ + R +++ Sbjct: 322 PELVTSGAVPVEAVDQAVRRVLALKEAIGLFDNPYRSLDPEVERKHTATLAMRALSRESG 381 Query: 369 EKSSVLLKND-GVLPL-QAGQRVALIGPFAASGD-ILGWWS-WQGSQETAVQLGESMQKV 424 +S VLLKND G+LPL +AG+R+ALIGPFA D +LG W + + V L ++ Sbjct: 382 ARSIVLLKNDQGLLPLPKAGKRLALIGPFADDRDNVLGAWGGFFADRRLNVDLATGLRAQ 441 Query: 425 SGDPGHVLISEGCSIDTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDIRLPE 484 DP ++++ GC ++T R+DIR+P Sbjct: 442 MADPANLIVERGCEVETTIAGGFERAVAAAQAADIVLLAVGESEDMTGEAKSRTDIRIPP 501 Query: 485 AQLELVREMKKLGKPVVAVLFNGRPLDLHGVYDVADAVLEAWFPGSEGGAALADILYGKV 544 Q L + GKPVV +L +GR + L GV A A+L WF GSE G A+AD+L+G V Sbjct: 502 VQQRLAEAIAATGKPVVVLLRHGRAIALEGVVKDAPAILATWFLGSEMGHAVADVLFGAV 561 Query: 545 NPSGRLSMSFPYSAGQIPVYYNAYNTGRPKPVEHTDNRYISQYIDIPNEPLLPFGFGLSY 604 NPSGRL +SFP +GQ P +YN+ TGRP P + Y +++ I N+ L PFGFGL Y Sbjct: 562 NPSGRLPVSFPIDSGQQPFFYNSRTTGRPAPADPNAQEYKARWRSIRNDALYPFGFGLGY 621 Query: 605 TTFAFEGFSLSSDCLSADRPLEARVTVTNTGSMAGTETVQLYIRDMSGETVRPVKELKDF 664 T+F+ LS+ L+ D L V NTG + G VQLYIRD RPV+ELK F Sbjct: 622 TSFSLSDLKLSTARLAWDDTLHVTAKVRNTGQVHGDHVVQLYIRDRVASRTRPVRELKGF 681 Query: 665 RQVQLLPGESRDVVFQIEESLLRYHHSDLTFSSDPGMFTVYVGANSRDTQSATFRLI 721 ++V L PG R+V F++ L + + ++ +PG F V+V + D +F L+ Sbjct: 682 QRVSLAPGAEREVHFELRRENLMFVGDNDYWTVEPGAFDVWVANSCVDGLMGSFELL 738 >ref|NP_644175.1| beta-glucosidase [Xanthomonas axonopodis pv. citri str. 306] gb|AAM38711.1| beta-glucosidase [Xanthomonas axonopodis pv. citri str. 306] Length = 723 Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust. Identities = 298/718 (41%), Positives = 412/718 (57%), Gaps = 12/718 (1%) Query: 10 VKHMTLEEKIAQL---LQLAAPFYDEPGDESEITGPMEELGIKYDTKRAVGSVLGIAGAK 66 + MT+EEK+ QL + PF + E+ + E L + VGS+ GA Sbjct: 10 IARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVL--QQVRLGRVGSLFNGVGAA 67 Query: 67 KMMAVQKEHLAGSRLGIPLLFMADIVHGFKTIFPIPLAIGCSWDPELAEQSAGIAARESA 126 + +QK + SRLGIP++ AD++HG +T+FPIPL S++P LAE++A A E+ Sbjct: 68 LGVQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPALAERTARATAIEAT 127 Query: 127 VSGLHVTFAPMVDLVRDARWGRVMESTGEDPYLNAVFAKAFVQGFQGDNLKDDVSRVAAC 186 +GLH T+AP VD+ RD RWGR E GED L A FA A V+GFQG +L + A Sbjct: 128 AAGLHWTYAPAVDIARDQRWGRGAEGAGEDVMLGAAFAAARVRGFQGSDLTAH-DCLLAT 186 Query: 187 VKHFAAYGLVEGGREYNTVDLSERQLREYYLPAYKAAVDAGVEMVMTSFNTVNGIPATGN 246 KHFAAYG V G EYNTVD++ + LR+ +LP +KAA DAG VM+SFN +NG+PA+ N Sbjct: 187 PKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVPASAN 246 Query: 247 RSLMRGLLRDEWGFDGVVISDWAAIKEIIAHGXXXXXXXXXXXXISSGVDIDMMTTSYVN 306 L+ +LR EW F GVVISD+ A E+IAHG +G+D+ M + Y Sbjct: 247 HELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAA 306 Query: 307 HLPELVAEGLVDEALIDEAVLRILVLKEKLGLFENPMRGADPELEQQIVYSQEHRKVAQR 366 HLP LV G V A +D +V RIL LKE +GLF+NP R DP E + H +++ Sbjct: 307 HLPSLVESGEVPMATLDASVRRILQLKEAIGLFDNPYRSLDPAREADTTHLPAHDALSRD 366 Query: 367 LAEKSSVLLKND-GVLPL-QAGQRVALIGPFAASG-DILGWWSWQGSQETAVQLGESMQK 423 A +S VLLKN+ GVLPL ++GQR+ALIGPF +I G W+ G +E V L + ++ Sbjct: 367 AARRSIVLLKNEGGVLPLKKSGQRIALIGPFVQDRENIEGCWTLFGDKERYVTLEQGVRA 426 Query: 424 VSGDPGHVLISEGCSIDTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDIRLP 483 V G +++ GC ++ R++I LP Sbjct: 427 VVGTEDLSVVA-GCGLEEALPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRTEITLP 485 Query: 484 EAQLELVREMKKLGKPVVAVLFNGRPLDLHGVYDVADAVLEAWFPGSEGGAALADILYGK 543 AQ L + G P+V +L NGR L L G ADA+ W+ G++ G +AD+L+G Sbjct: 486 PAQQALAEAIAATGTPMVVLLRNGRALALGGAVRDADAIAVTWYLGTQTGTGVADVLFGD 545 Query: 544 VNPSGRLSMSFPYSAGQIPVYYNAYNTGRPKPVEHTDNRYISQYIDIPNEPLLPFGFGLS 603 NPS RL +SFP + GQ P +YN TGRP+ T + Y +++ ++PNEPL PFG GLS Sbjct: 546 YNPSARLPISFPQATGQQPYFYNHLRTGRPE--LPTLSEYKARWREMPNEPLYPFGHGLS 603 Query: 604 YTTFAFEGFSLSSDCLSADRPLEARVTVTNTGSMAGTETVQLYIRDMSGETVRPVKELKD 663 YTTFA+ LS+ L D L V+NTG +AG E VQLY+ D VRPV+ELK Sbjct: 604 YTTFAYAQPQLSAAQLGWDEALTITTRVSNTGKVAGEEVVQLYVHDRVASRVRPVRELKG 663 Query: 664 FRQVQLLPGESRDVVFQIEESLLRYHHSDLTFSSDPGMFTVYVGANSRDTQSATFRLI 721 FR+V L PGES+DVVF +E L + + F ++PG+F V+V A+++ ++ TF L+ Sbjct: 664 FRKVLLQPGESQDVVFTLERDALAFTNHKGVFGAEPGLFDVWVCASAKSGEAVTFELL 721 >ref|NP_639159.1| beta-glucosidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM43488.1| beta-glucosidase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 723 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 294/718 (40%), Positives = 412/718 (57%), Gaps = 12/718 (1%) Query: 10 VKHMTLEEKIAQL---LQLAAPFYDEPGDESEITGPMEELGIKYDTKRAVGSVLGIAGAK 66 + MT+EEK+ QL + PF + E+ + E L + + VGS+ GA Sbjct: 10 IARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVL--QQVRQGRVGSLFNGVGAA 67 Query: 67 KMMAVQKEHLAGSRLGIPLLFMADIVHGFKTIFPIPLAIGCSWDPELAEQSAGIAARESA 126 + +QK + SRLGIP++ AD++HG +T+FPIPL S++PELAE++A A E+ Sbjct: 68 LGVQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEAT 127 Query: 127 VSGLHVTFAPMVDLVRDARWGRVMESTGEDPYLNAVFAKAFVQGFQGDNLKDDVSRVAAC 186 +GLH T+AP VD+ RD RWGR E GED L FA A V+GFQG +LK D + A Sbjct: 128 AAGLHWTYAPAVDIARDQRWGRGAEGAGEDVVLGMAFAAARVRGFQGSDLKAD-DCLLAT 186 Query: 187 VKHFAAYGLVEGGREYNTVDLSERQLREYYLPAYKAAVDAGVEMVMTSFNTVNGIPATGN 246 KHFAAYG V G EYNTVD++ + LR+ +LP +KAA DAG VM+SFN +NG+PA+ N Sbjct: 187 PKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFDAGALTVMSSFNDINGVPASAN 246 Query: 247 RSLMRGLLRDEWGFDGVVISDWAAIKEIIAHGXXXXXXXXXXXXISSGVDIDMMTTSYVN 306 L+ +LR EW F GVVISD+ A E+IAHG +G+D+ M + Y Sbjct: 247 HELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAA 306 Query: 307 HLPELVAEGLVDEALIDEAVLRILVLKEKLGLFENPMRGADPELEQQIVYSQEHRKVAQR 366 HLP LV G V A +D +V RIL LKE +GLF+NP R DP E + H +++ Sbjct: 307 HLPSLVESGEVPMATLDASVRRILQLKEAIGLFDNPYRSLDPAREADTAHLPAHDALSRD 366 Query: 367 LAEKSSVLLKNDG-VLPL-QAGQRVALIGPFAASG-DILGWWSWQGSQETAVQLGESMQK 423 A +S VLLKN+G +LPL ++GQ +ALIGPF +I G W+ G +E V L + ++ Sbjct: 367 AARRSIVLLKNEGDLLPLKKSGQNIALIGPFVQDRENIEGCWTLFGDKERYVTLEQGVRA 426 Query: 424 VSGDPGHVLISEGCSIDTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDIRLP 483 V ++ + GC ++ R++I LP Sbjct: 427 VVA-ADNLSVVAGCGLEEPLPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRTEITLP 485 Query: 484 EAQLELVREMKKLGKPVVAVLFNGRPLDLHGVYDVADAVLEAWFPGSEGGAALADILYGK 543 AQ L + G P+V +L NGR L L G ADA+ W+ G++ G +AD+L+G Sbjct: 486 PAQQALAEAVAATGTPMVILLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVADVLFGD 545 Query: 544 VNPSGRLSMSFPYSAGQIPVYYNAYNTGRPKPVEHTDNRYISQYIDIPNEPLLPFGFGLS 603 NPS RL +SFP GQ P +YN TGRP+ T + Y +++ ++PNEPL PFG GLS Sbjct: 546 YNPSARLPISFPQVTGQQPYFYNHLRTGRPE--LPTLSEYKARWREMPNEPLYPFGHGLS 603 Query: 604 YTTFAFEGFSLSSDCLSADRPLEARVTVTNTGSMAGTETVQLYIRDMSGETVRPVKELKD 663 YTTFA+ LS+ L ++ L VTNTG++AG E VQLY+ D VRPV+ELK Sbjct: 604 YTTFAYAAPQLSTTQLGWEQTLTITTRVTNTGTVAGEEVVQLYVHDRVASRVRPVRELKG 663 Query: 664 FRQVQLLPGESRDVVFQIEESLLRYHHSDLTFSSDPGMFTVYVGANSRDTQSATFRLI 721 FR+V L PGES +VVF ++ L + + F ++PG+F V+V A+++ + +F L+ Sbjct: 664 FRKVLLQPGESAEVVFTLQRDALAFTNHKGVFGAEPGLFDVWVCASAKSGEPVSFELL 721 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 999,700,999 Number of extensions: 41329494 Number of successful extensions: 101620 Number of sequences better than 1.0e-05: 652 Number of HSP's gapped: 99588 Number of HSP's successfully gapped: 924 Length of query: 721 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 588 Effective length of database: 396,129,411 Effective search space: 232924093668 Effective search space used: 232924093668 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)