BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0555.0005.p (330 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAR99614.1| putative rhamnosyltransferase [Geobacillus stearo... 375 e-103 ref|ZP_00018360.1| hypothetical protein [Chloroflexus aurantiacus] 249 6e-65 ref|NP_904586.1| glycosyl transferase, group 2 family protein [P... 236 5e-61 ref|NP_348937.1| Predicted glycosyltransferase [Clostridium acet... 229 5e-59 ref|ZP_00098823.1| COG1216: Predicted glycosyltransferases [Desu... 229 7e-59 >gb|AAR99614.1| putative rhamnosyltransferase [Geobacillus stearothermophilus] Length = 289 Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust. Identities = 161/277 (58%), Positives = 220/277 (79%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYNT +LT++ + S+ S+T + YEII++DN+S DDSV + +FP +++I N +NVG+ Sbjct: 8 VNYNTPKLTVEAIESILKSKTKYSYEIIVVDNHSSDDSVRILKGKFPNIVVIENKQNVGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 ++ANNQ ++++ GRY+LLLNSDT+V +DT++ MI FMD +GASGC+V+LP+G LD+A Sbjct: 68 SKANNQAIKLSKGRYILLLNSDTIVKEDTIEKMIEFMDKSKKVGASGCEVVLPNGELDRA 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 C RGFPTP ASFYY G ++LFP RFN Y LGY++ ++ +P+DCLVGAFM++RRE IE Sbjct: 128 CHRGFPTPEASFYYLVGLARLFPRSRRFNQYHLGYMNLNEPHPIDCLVGAFMMVRREVIE 187 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHRAM 262 QVG LDE+FFMYGED+DWC+RIK+AGW IYY P TSIIH KG S++++PFKIVYEFHRAM Sbjct: 188 QVGLLDEEFFMYGEDIDWCYRIKQAGWEIYYCPFTSIIHYKGASSKKKPFKIVYEFHRAM 247 Query: 263 ILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNAL 299 LFHRKHY+++Y ++N VY G+ KF LS + N Sbjct: 248 FLFHRKHYARKYPFIVNCLVYTGIAAKFILSAIINTF 284 >ref|ZP_00018360.1| hypothetical protein [Chloroflexus aurantiacus] Length = 302 Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 125/287 (43%), Positives = 169/287 (58%), Gaps = 5/287 (1%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 LNYN L DCL S+ S T + ++DN S D S + F V LI + N G+ Sbjct: 12 LNYNRADLLADCLASIAASPTRCDLSVWVVDNASTDGSAAMVRERFGWVHLIESPVNGGF 71 Query: 83 ARANNQGMEVA-----SGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDG 137 + NN + Y+LLLN+DTVV L M+ ++D P +G G K++LPDG Sbjct: 72 SAGNNLALRQILTLPDPPDYILLLNNDTVVPPGALDGMVDYLDHHPTVGVVGPKLLLPDG 131 Query: 138 SLDKACKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLR 197 SLD AC+R FPTP+ +FY FG ++LFP RF Y L YLDPD + VD +VGA M++R Sbjct: 132 SLDLACRRSFPTPAIAFYRLFGLARLFPRSRRFAAYNLTYLDPDVETEVDAVVGACMMVR 191 Query: 198 RETIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYE 257 + +VG LDE FFMYGEDLDW +RIK+ GW + YYP ++ H K ++ RRP + Sbjct: 192 TSVVREVGLLDEAFFMYGEDLDWAYRIKQYGWKVVYYPAVTVYHYKRAASSRRPIPSIRA 251 Query: 258 FHRAMILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNALIRPRT 304 F+ AM LFHRKHY+ + +NG + G+ VK +L RN L+ R Sbjct: 252 FYDAMRLFHRKHYAATTPAFLNGLIELGITVKELWALGRNLLLPSRA 298 >ref|NP_904586.1| glycosyl transferase, group 2 family protein [Porphyromonas gingivalis W83] gb|AAQ65485.1| glycosyl transferase, group 2 family protein [Porphyromonas gingivalis W83] Length = 355 Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 123/288 (42%), Positives = 175/288 (60%), Gaps = 1/288 (0%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NY CL SV S E+ ++DNNS D SVE + FP V +AN ENVG+ Sbjct: 8 VNYRVPYFLEQCLLSVRKSAQGIDTEVWVVDNNSGDGSVEYLQSRFPEVHFVANEENVGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 +RANNQ + ++ G+YVLLLN DT++ + TL+T++ FMD +P+ G G K++ G Sbjct: 68 SRANNQAIRLSKGQYVLLLNPDTLIGESTLRTVVDFMDSKPNAGGLGVKMLNGHGRFLPE 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 KRGFP+P SF G ++LFP RFN Y L YL D+ + V+ L GAFML+RRE ++ Sbjct: 128 SKRGFPSPWVSFCKLSGLNRLFPHSSRFNRYHLSYLSRDEVHKVEVLSGAFMLMRREALD 187 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHRAM 262 +VG LDE FFMYGED+D +R+ G+ YYYP T I+H KG S+ K + F+ AM Sbjct: 188 KVGLLDERFFMYGEDIDLSYRLILGGYDNYYYP-TPILHYKGESSSVSDVKYLRSFYGAM 246 Query: 263 ILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNALIRPRTAPSPAQ 310 LF K+Y R N +++G + + + AL+L+ +L + A PA+ Sbjct: 247 GLFFDKYYRNRMNPLLHGLINVVIKARTALALMLRSLRKVPAAEKPAK 294 >ref|NP_348937.1| Predicted glycosyltransferase [Clostridium acetobutylicum] pir||B97186 probable glycosyltransferase CAC2321 [imported] - Clostridium acetobutylicum gb|AAK80277.1| Predicted glycosyltransferase [Clostridium acetobutylicum] Length = 298 Score = 229 bits (585), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 110/281 (39%), Positives = 174/281 (61%), Gaps = 5/281 (1%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPG---VMLIANSEN 79 LNYN R +C+ S+Y++ +E+IL+DN S D+S E I +F G I + N Sbjct: 11 LNYNAKRFLEECINSIYENTKEIKFEVILVDNKSTDNSAEFIKEKFTGKEDFTFIESKVN 70 Query: 80 VGYARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSL 139 G+A NN+ +EV+ GR VLLLN DTVV + + + +G +GCKV+ PDG+L Sbjct: 71 CGFAAGNNKAIEVSKGRAVLLLNPDTVVNGNVIGETYKCLMKDDKVGVAGCKVLNPDGTL 130 Query: 140 DKACKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRE 199 AC+R PTP +FY FG SK+F + +F Y L Y D+ VD + G+++++++E Sbjct: 131 QLACRRMIPTPKDAFYKIFGLSKIFKNNKKFTRYNLTYASADEFIDVDSVSGSYLMIKKE 190 Query: 200 TIEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFH 259 I+++G LDE FFMYGE++DWC R ++AG+ + Y P +IIH KG S+++ K YEF+ Sbjct: 191 VIDKIGYLDETFFMYGEEMDWCLRARKAGYIVRYCPVGTIIHYKGESSKQLSHKATYEFY 250 Query: 260 RAMILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNALI 300 RAM +F++K+ + N ++ V+ GV ++L++ A++ Sbjct: 251 RAMWIFYKKN--NKGNIFLDSIVWLGVKFLLFIALIKLAIL 289 >ref|ZP_00098823.1| COG1216: Predicted glycosyltransferases [Desulfitobacterium hafniense] Length = 290 Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 109/278 (39%), Positives = 175/278 (62%), Gaps = 3/278 (1%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYN LT +RS+ D YEII++DN+ +D +E + +++ +N G+ Sbjct: 13 INYNAKGLTDQTVRSISDCAPQISYEIIVVDNS--NDVLEEYDGVNGKLTVLSRVKNKGF 70 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 A N G+ + G+Y+L LN+DT++ K TL+ + +M ++GA G + +L DGSLD A Sbjct: 71 GNACNIGVANSRGKYILFLNNDTIMHKGTLEACLRYMQQHSNVGALGARTLLSDGSLDHA 130 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 CKRGFPTP +S YY G K +P ++ Y+ +++ D VD + G+F+++ R + Sbjct: 131 CKRGFPTPMSSLYYFCGIDKRYPKNKKYGAYRQTFIENDSISEVDSVAGSFLMMPRFVFD 190 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSA-RRRPFKIVYEFHRA 261 ++GG DEDFFMYGEDLD C+R+K G+ + YY + SI HLKG S + K+V+ F+ A Sbjct: 191 KLGGFDEDFFMYGEDLDLCYRVKMLGYSVIYYGKASITHLKGQSGLHTKSQKVVHHFYNA 250 Query: 262 MILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNAL 299 M++F+RKHY +Y+ +++ VY GV +K +L+++R L Sbjct: 251 MLIFYRKHYVDKYSVLVSALVYCGVKIKCSLTILRLKL 288 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.323 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 477,108,977 Number of extensions: 20122844 Number of successful extensions: 43402 Number of sequences better than 1.0e-05: 369 Number of HSP's gapped: 43473 Number of HSP's successfully gapped: 373 Length of query: 330 Length of database: 757,237,578 Length adjustment: 126 Effective length of query: 204 Effective length of database: 415,135,104 Effective search space: 84687561216 Effective search space used: 84687561216 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 126 (53.1 bits)