BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0551.0003.p
         (133 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAJ49550.1| unknown [environmental sequence]                        81   1e-14
gb|EAK68372.1| unknown [environmental sequence]                        75   5e-13
gb|EAK68604.1| unknown [environmental sequence]                        75   5e-13
ref|NP_799553.1| conserved hypothetical protein [Vibrio parahaem...    75   5e-13
gb|EAF70314.1| unknown [environmental sequence]                        74   7e-13

>gb|EAJ49550.1| unknown [environmental sequence]
          Length = 149

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 55/112 (49%)

Query: 20  HGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXXXXX 79
           HG+QKLF WFGGYG +GTG WMESIG+ PG LMA++AG  E            T      
Sbjct: 32  HGAQKLFAWFGGYGLEGTGQWMESIGLAPGFLMALLAGSAEFFGGLALIIGFLTRPAALV 91

Query: 80  XXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                      VHA NG + T NG EF LT               +S+D+L+
Sbjct: 92  SAFTMVIAIFSVHAANGLFMTNNGYEFALTLLAATGALAIQGGGKLSIDSLI 143


>gb|EAK68372.1| unknown [environmental sequence]
          Length = 147

 Score = 75.1 bits (183), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 52/115 (45%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
            + HGSQKLFGWFGGYG +GTG WM SIG+ PG LMA+MAG  E            T   
Sbjct: 28  LMAHGSQKLFGWFGGYGLEGTGQWMASIGLTPGYLMALMAGSSEFFGGLLIIIGLLTRPT 87

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                         VH  NG + + NG EF L                +S D LL
Sbjct: 88  ALVLSFTMVVAIFSVHIGNGLFLSNNGYEFGLALLAATVSLAVSGAGKLSADNLL 142


>gb|EAK68604.1| unknown [environmental sequence]
          Length = 147

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 52/115 (45%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
            + HGSQKLFGWFGGYG +GTG WM SIG+ PG LMA+MAG  E            T   
Sbjct: 28  LMAHGSQKLFGWFGGYGLEGTGQWMASIGLTPGYLMALMAGSSEFFGGLLLIIGLLTRPT 87

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                         VH  NG + + NG EF L                +S D LL
Sbjct: 88  ALVLSFTMVVAIFSVHIGNGLFLSNNGYEFGLALLAATVSLAVSGAGKLSADNLL 142


>ref|NP_799553.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 dbj|BAC61386.1| conserved hypothetical protein [Vibrio parahaemolyticus]
          Length = 147

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 51/115 (44%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
           F+ HG+QKLFGWFGGYG +GTG WM SIG+ PGVLMA +AG  E            T   
Sbjct: 28  FMAHGAQKLFGWFGGYGLEGTGQWMASIGLGPGVLMAFLAGSAEFFGGLFILLGLLTRPA 87

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                         VH  NG +   NG EF L                 +LD  L
Sbjct: 88  AVALSFTMVVAIISVHFENGLFMANNGYEFGLALLAASVSLAFSGAGKAALDNFL 142


>gb|EAF70314.1| unknown [environmental sequence]
          Length = 150

 Score = 74.3 bits (181), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 53/117 (45%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
           F  HG+QKLF WFGGYG +GTG WMESIG+ PG LMA+MAG  E                
Sbjct: 30  FSAHGAQKLFAWFGGYGLEGTGQWMESIGLAPGYLMALMAGGAEFFGGLLLIVGLLVRPA 89

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALLFN 133
                         VH  NG + + NG EF L+               +SLD  + N
Sbjct: 90  SFVLAITMVVAIFTVHIDNGLFMSNNGYEFGLSLLAITLALFIQGAGKLSLDGKIHN 146


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.321    0.140    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 123,405,564
Number of extensions: 3006176
Number of successful extensions: 7807
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 7789
Number of HSP's successfully gapped: 26
Length of query: 133
Length of database: 757,237,578
Length adjustment: 95
Effective length of query: 38
Effective length of database: 499,303,173
Effective search space: 18973520574
Effective search space used: 18973520574
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 120 (50.8 bits)