BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0028.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAG69711.1| unknown [environmental sequence] 287 4e-76 gb|EAI39924.1| unknown [environmental sequence] 282 8e-75 gb|EAF83289.1| unknown [environmental sequence] 236 7e-61 gb|EAC94497.1| unknown [environmental sequence] 199 9e-50 gb|EAH65306.1| unknown [environmental sequence] 161 3e-38 >gb|EAG69711.1| unknown [environmental sequence] Length = 267 Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 146/271 (53%), Positives = 187/271 (69%), Gaps = 6/271 (2%) Query: 5 MAKVRYGIIGIGNMGRAHALSLLD-DVKGAELAAVCDISPERLEWASEQLPEKVKHFSTA 63 M KVR GIIG+GNMGR HA LLD V ELAAV SP +LE E+ V+ F + Sbjct: 1 MDKVRIGIIGMGNMGRFHANDLLDGKVPRGELAAVGSTSPHKLEEYKEK---GVQIFGSG 57 Query: 64 AEMFQSGTIDAVLISTPHYDHPPLAIEALGYGLHVLIEKPAGVHTKAVQEM-NEAAAKSD 122 EM SG IDA+LI+TPHY H L + AL GLH+++EKP H + + AAA+ D Sbjct: 58 EEMIASGAIDALLIATPHYQHTSLGVAALEAGLHIMVEKPISAHKADAERLIAAAAARPD 117 Query: 123 RKFGIMYNQRTNPLYQKLRELIQAGELGEIRRTNWIITNWYRSQNYYDSGGWRATWAGEG 182 + FG M+ R P YQK+REL+Q GELG++ R WI+T+W+RS+ Y+ SGGWRATW GEG Sbjct: 118 QVFGAMFQLRVEPRYQKIRELVQGGELGDLVRVLWIMTDWFRSEAYFQSGGWRATWKGEG 177 Query: 183 GGVLLNQDPHQLDLWQWTTGMMPKRIRAFCYFGKYRNIEVEDDVTAYVEYPNGATGLFIT 242 GGVLLNQ HQLD QW TG MP ++R+ GK+ +IEVEDDVT Y+E+ NGA+G FIT Sbjct: 178 GGVLLNQCLHQLDAMQWITG-MPSQVRSHVGIGKWHDIEVEDDVTCYMEFANGASGAFIT 236 Query: 243 TTGEAPGTNRFEITGDNGKILVEDGALTFWR 273 ++GE PG+NRFEI G G++++E+ LT R Sbjct: 237 SSGETPGSNRFEIAGTKGRLILENDTLTLTR 267 >gb|EAI39924.1| unknown [environmental sequence] Length = 367 Score = 282 bits (722), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 154/370 (41%), Positives = 214/370 (57%), Gaps = 12/370 (3%) Query: 8 VRYGIIGIGNMGRAHALSLLDD-VKGAELAAVCDISPERLEWASEQLPEKVKHFSTAAEM 66 VRYG+IGIG MG HA L ++ ++ A LAAV D +E+ ++ E + F Sbjct: 5 VRYGVIGIGGMGANHAKKLQENKIENAILAAVAD---SNVEYKNKY--ENIPFFENTDNF 59 Query: 67 FQSGTIDAVLISTPHYDHPPLAIEALGYGLHVLIEKPAGVHTKAVQEMNEAAAKSDRKFG 126 F + IDA +I+TPH H LA +AL ++V+IEKP + +K +E + F Sbjct: 60 FDNKIIDAAIIATPHKSHIDLAKKALENNINVIIEKPLAITSKKCREFINISQSFKAFFT 119 Query: 127 IMYNQRTNPLYQKLRELIQAGELGEIRRTNWIITNWYRSQNYYDSGGWRATWAGEGGGVL 186 +M NQRTNP+Y K++ELI ELG++ R W ITNW+R+ YY + WRA W EGGGVL Sbjct: 120 VMLNQRTNPVYVKIKELINGNELGKVHRFQWTITNWFRTNYYYQTSNWRAKWESEGGGVL 179 Query: 187 LNQDPHQLDLWQWTTGMMPKRIRAFCYFGKYRNIEVEDDVTAYVEYPNGATGLFITTTGE 246 +NQ HQLDL QW G MP + G++ IEVED+VT+ +Y NG G+FITTTGE Sbjct: 180 INQSIHQLDLCQWLFG-MPDSVYTDLGLGRFHEIEVEDEVTSIFKYKNGLKGVFITTTGE 238 Query: 247 APGTNRFEITGDNGKILVEDGALTFWRLRTPEPVFNAEYKGGFGAPECWKCEIPVTKGDG 306 APG NR EI D G I ++D +T W F K FG P+ K K D Sbjct: 239 APGVNRLEIASDKGLITIQDNNVT-WEKIDSSTEFIKNSKTLFGMPKKEKINFNF-KADL 296 Query: 307 EQ---HRGILRNFTNAILYDEPLLAPGEEGIHGLTLSNAMYLSAWTDNWVDLPIDSDLFH 363 +Q H+ +++NFTN +L E LL G++G++ + L NAM LS + ++LP+D + Sbjct: 297 DQHIEHQRLIQNFTNFLLGKEKLLVNGKDGLNSVELINAMVLSGLEEKKIELPLDEVKYE 356 Query: 364 EKLMEKVQNS 373 +KL E + S Sbjct: 357 QKLEEMISKS 366 >gb|EAF83289.1| unknown [environmental sequence] Length = 278 Score = 236 bits (602), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 116/274 (42%), Positives = 165/274 (60%), Gaps = 2/274 (0%) Query: 98 VLIEKPAGVHTKAVQEMNEAAAKSDRKFGIMYNQRTNPLYQKLRELIQAGELGEIRRTNW 157 +L+EKP + TK E+ A D FG+M NQRTNP+Y+ L+++I ELGEI R W Sbjct: 1 LLVEKPLSITTKKTLELINFANSCDVSFGVMLNQRTNPIYKTLKQMIDDNELGEIHRIQW 60 Query: 158 IITNWYRSQNYYDSGGWRATWAGEGGGVLLNQDPHQLDLWQWTTGMMPKRIRAFCYFGKY 217 IT+W+RS YY + WRA+W GEGGGVL+NQ HQLDLWQW G MP + A G++ Sbjct: 61 TITDWFRSNYYYSTSSWRASWKGEGGGVLINQSIHQLDLWQWLFG-MPDSVHANINLGRF 119 Query: 218 RNIEVEDDVTAYVEYPNGATGLFITTTGEAPGTNRFEITGDNGKILVEDGALTFWRLRTP 277 NIEVEDDVTA +Y NG+ GLF+TTTGE PG NR E+ DNG +++E+ + + + Sbjct: 120 HNIEVEDDVTALFKYHNGSHGLFVTTTGETPGVNRLEVASDNGLMIIENNKIMWNKNEIS 179 Query: 278 EPVFNAEYKGGFGAPECWKCEIPVTKGD-GEQHRGILRNFTNAILYDEPLLAPGEEGIHG 336 + + K P E+ + + + I++NF++ IL E L G+EG++ Sbjct: 180 TTEYLKKSKKSMEKPNIKVEELKFENINFSTERKNIIQNFSDQILGIEKLYVDGKEGLNS 239 Query: 337 LTLSNAMYLSAWTDNWVDLPIDSDLFHEKLMEKV 370 + L NAM S V +PI+S+ + +KL E + Sbjct: 240 VELMNAMIYSGLNKTEVSIPINSENYEKKLDEII 273 >gb|EAC94497.1| unknown [environmental sequence] Length = 238 Score = 199 bits (506), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 104/234 (44%), Positives = 139/234 (59%), Gaps = 3/234 (1%) Query: 135 PLYQKLRELIQAGELGEIRRTNWIITNWYRSQNYYDSGGWRATWAGEGGGVLLNQDPHQL 194 P + KL+++I GELG+I R W IT+W+R+ YY+ WRATW GEGGGVL+NQ HQL Sbjct: 1 PAFIKLKQMINNGELGKIHRYQWTITDWFRTDYYYNISDWRATWKGEGGGVLMNQSIHQL 60 Query: 195 DLWQWTTGMMPKRIRAFCYFGKYRNIEVEDDVTAYVEYPNGATGLFITTTGEAPGTNRFE 254 DL QW G MP I G + NIEVED+VT+ ++Y +G G+F TTTGEAPG NR E Sbjct: 61 DLCQWLFG-MPNSIITDMRLGHFHNIEVEDEVTSILKYQDGLKGIFTTTTGEAPGVNRLE 119 Query: 255 ITGDNGKILVEDGALTFWRLRTPEPVFNAEYKGGFGAP--ECWKCEIPVTKGDGEQHRGI 312 I D G ++ ED LT+ +L+ + K F P E K + P +H I Sbjct: 120 IASDYGLVIYEDNCLTWKKLKESTSNYIKNSKTLFEKPSFEVLKFDFPHEDDQHIEHNRI 179 Query: 313 LRNFTNAILYDEPLLAPGEEGIHGLTLSNAMYLSAWTDNWVDLPIDSDLFHEKL 366 L+NFTN +L E L PG++GI+ + L NAM LS + LP+ + + KL Sbjct: 180 LQNFTNFLLGKEDLFVPGDQGINCVELINAMILSGLNKKEIVLPLSEEEYENKL 233 >gb|EAH65306.1| unknown [environmental sequence] Length = 195 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 6/196 (3%) Query: 8 VRYGIIGIGNMGRAHALSLLDD-VKGAELAAVCDISPERLEWASEQLPEKVKHFSTAAEM 66 +RYG+IGIG MG HA L ++ ++ A L+AV D LE+ ++ E + F A Sbjct: 5 IRYGVIGIGGMGANHAKKLQENKIENAILSAVAD---SNLEYKNK--FENIPFFENANNF 59 Query: 67 FQSGTIDAVLISTPHYDHPPLAIEALGYGLHVLIEKPAGVHTKAVQEMNEAAAKSDRKFG 126 F + IDA +I+TPH H LA +AL ++V+IEKP + +K +E + F Sbjct: 60 FNNKIIDAAIIATPHKSHIDLAKKALENNVNVIIEKPLAITSKKCREFINISRNYKACFT 119 Query: 127 IMYNQRTNPLYQKLRELIQAGELGEIRRTNWIITNWYRSQNYYDSGGWRATWAGEGGGVL 186 +M NQRTNP+Y K++ELI ELG++ R W ITNW+R+ YY WRA W EGGGVL Sbjct: 120 VMLNQRTNPVYFKIKELINRNELGKVHRFQWTITNWFRTNYYYQMSNWRAKWESEGGGVL 179 Query: 187 LNQDPHQLDLWQWTTG 202 +NQ HQLDL QW G Sbjct: 180 INQSIHQLDLCQWLFG 195 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 650,188,641 Number of extensions: 29752680 Number of successful extensions: 70348 Number of sequences better than 1.0e-05: 989 Number of HSP's gapped: 69829 Number of HSP's successfully gapped: 989 Length of query: 391 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 263 Effective length of database: 409,704,906 Effective search space: 107752390278 Effective search space used: 107752390278 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)