BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0547.0050.p (207 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_243503.1| BH2637~unknown conserved protein [Bacillus halo... 240 2e-62 ref|NP_389348.1| yktB [Bacillus subtilis] >gi|7475145|pir||D6986... 201 8e-51 ref|NP_692341.1| hypothetical protein OB1420 [Oceanobacillus ihe... 192 4e-48 ref|NP_833679.1| hypothetical protein [Bacillus cereus ATCC 1457... 190 2e-47 ref|NP_658001.1| hypothetical protein predicted by GeneMark [Bac... 189 3e-47 >ref|NP_243503.1| BH2637~unknown conserved protein [Bacillus halodurans] pir||E83979 hypothetical protein BH2637 [imported] - Bacillus halodurans (strain C-125) dbj|BAB06356.1| BH2637~unknown conserved protein [Bacillus halodurans] Length = 213 Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 112/206 (54%), Positives = 146/206 (70%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 M GF DFDVF IDGLEPRME + +RPKL G ELAP LS LTG+EMF H AKH Sbjct: 1 MSIPGFVQADFDVFTIDGLEPRMEKIKNQIRPKLEAFGTELAPTLSSLTGDEMFVHTAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARRTV+ PNDTW A+ +KRGYK LPHFQVG++ SHLF+ FAIIYES K FAE L + Sbjct: 61 ARRTVNPPNDTWAAFANSKRGYKKLPHFQVGLWESHLFVWFAIIYESPVKGAFAEELLKA 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 ++ +P + WS DH P +++++ AF + +RL++VKKAE+ CG+ +DR DP Sbjct: 121 PTAIRENIPDSFKWSVDHTKPDTVSESELSDDAFTKMVERLRDVKKAELLCGITLDRKDP 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRMS 206 ++ DGDKLL+ I TF+TL+PLY+++ Sbjct: 181 LVQDGDKLLHTIEDTFKTLVPLYQLA 206 >ref|NP_389348.1| yktB [Bacillus subtilis] pir||D69864 hypothetical protein yktB - Bacillus subtilis emb|CAB13338.1| yktB [Bacillus subtilis subsp. subtilis str. 168] gb|AAC24939.1| unknown [Bacillus subtilis] Length = 212 Score = 201 bits (511), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 132/201 (65%) Query: 6 FTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKHARRTV 65 FT EDF+ F I+GL+ RME L VRPKL LGE AP LS LTG+EMFPHVAKHARR+V Sbjct: 6 FTEEDFNTFTIEGLDARMEVLKETVRPKLTALGEHFAPTLSALTGDEMFPHVAKHARRSV 65 Query: 66 HAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRHLGDVQ 125 + P D+WVA+ +KRGYK LPHFQ+G++ SH+F+ FAIIYES K + + L + + Sbjct: 66 NPPADSWVAFANSKRGYKKLPHFQIGLWESHVFVWFAIIYESPIKEEYGKLLEVNQETIT 125 Query: 126 AELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDPVLADG 185 +P + WS DH P Q++MDK L +RL+ VKKAE+ CG+++ + + + + Sbjct: 126 KNIPDSFVWSADHTKPGVHKQSEMDKEQLKTLFERLQTVKKAELLCGIQLQKEEVLNMNN 185 Query: 186 DKLLNVIRQTFETLLPLYRMS 206 + L I F+ L LYR++ Sbjct: 186 QEFLQRIDDAFKQLAFLYRLT 206 >ref|NP_692341.1| hypothetical protein OB1420 [Oceanobacillus iheyensis HTE831] dbj|BAC13376.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 205 Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 96/203 (47%), Positives = 130/203 (64%), Gaps = 5/203 (2%) Query: 4 QGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKHARR 63 GFT +DF+ F+I+GL+ RMEA+ ++PK ++GE LA LS T E++ H+AKHARR Sbjct: 2 NGFTNKDFETFNINGLDERMEAIQTRIQPKFQQIGESLAEDLSKKTNNELYLHIAKHARR 61 Query: 64 TVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRHLGD 123 TV+ PNDTW+A NKRGYK PHFQVG+F H+FI A+IYE NK A A H + Sbjct: 62 TVNPPNDTWLAIADNKRGYKKHPHFQVGVFDDHVFIWLALIYELPNKSKIASAYINHFDE 121 Query: 124 VQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDPVLA 183 V+ LP Y S DH + D++KS +R ++VKKAE G I++ DP+LA Sbjct: 122 VK-NLPTSYVVSLDHTKKDAISLTDLNKSHL----ERFRDVKKAEFLIGKHIEKGDPILA 176 Query: 184 DGDKLLNVIRQTFETLLPLYRMS 206 +GD+L I FE LLPLY+++ Sbjct: 177 NGDELYQFIMDVFEQLLPLYQLA 199 >ref|NP_833679.1| hypothetical protein [Bacillus cereus ATCC 14579] gb|AAP10880.1| hypothetical protein [Bacillus cereus ATCC 14579] Length = 208 Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 121/206 (58%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 M Q F + DFDVF +DGLE RM A+ + PKL LGE+ A +LS T E F HVAKH Sbjct: 1 MTIQTFKSTDFDVFTVDGLEERMSAIKTNIHPKLEALGEQFAEYLSKQTDENFFYHVAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARR V+ PNDTWVA+ NKRGYK LPHFQ+G++ +H FI F +IYE KV A A H Sbjct: 61 ARRKVNPPNDTWVAFSTNKRGYKMLPHFQIGLWGTHAFIYFGLIYECPQKVETAHAFLEH 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 L D++ +P + WS DH P ++ + +RL VKKAE+ G+ I + Sbjct: 121 LNDLKTNIPNDFVWSIDHTKPSVKLHKTLETEDLQKMIERLATVKKAELLVGIHISPEEF 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRMS 206 ++ L I T ++LLPLY + Sbjct: 181 SAMTNEQFLAKIESTMQSLLPLYALC 206 >ref|NP_658001.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_846408.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP27894.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 208 Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 121/206 (58%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 M Q F + DF+VF +DGLE RM A+ + PKL LGE+ A +LS T E F HVAKH Sbjct: 1 MTLQTFKSTDFEVFTVDGLEERMSAIKTNIHPKLEALGEQFAAYLSKQTDENFFYHVAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARR V+ PNDTWVA+ NKRGYK LPHFQ+G++ +H FI F +IYE KV A A H Sbjct: 61 ARRKVNPPNDTWVAFSTNKRGYKMLPHFQIGLWGTHAFIYFGLIYECPQKVETAHAFLEH 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 L D++ +P + WS DH P ++ + +RL VKKAE+ G+ I + Sbjct: 121 LNDLKTNIPNDFVWSIDHTKPSVKLHKTLETEDLQKMIERLATVKKAELLVGIHISPEEF 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRMS 206 ++ L I T ++LLPLY + Sbjct: 181 SAMTNEQFLAKIESTMQSLLPLYALC 206 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.323 0.139 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 311,499,944 Number of extensions: 12058244 Number of successful extensions: 24138 Number of sequences better than 1.0e-05: 17 Number of HSP's gapped: 24124 Number of HSP's successfully gapped: 17 Length of query: 207 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 87 Effective length of database: 431,425,698 Effective search space: 37534035726 Effective search space used: 37534035726 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 123 (52.0 bits)