BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0547.0044.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_832467.1| Acetyltransferase [Bacillus cereus ATCC 14579] ... 155 3e-37 ref|NP_979040.1| acetyltransferase, GNAT family [Bacillus cereus... 155 5e-37 ref|NP_845061.1| acetyltransferase, GNAT family [Bacillus anthra... 117 1e-25 ref|NP_656588.1| Acetyltransf, Acetyltransferase (GNAT) family [... 117 1e-25 ref|NP_655947.1| Acetyltransf, Acetyltransferase (GNAT) family [... 55 9e-07 >ref|NP_832467.1| Acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP09668.1| Acetyltransferase [Bacillus cereus ATCC 14579] Length = 192 Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 105/172 (61%), Gaps = 2/172 (1%) Query: 15 DDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA--K 72 +D+ +Y F I++ + EGL+ DDI++E+++K+Q S D YFL+A Sbjct: 17 NDVDELYLFFRIVITNTYKNEGLSQSLDDIENEINSKKQYLKSDFDSNGEGRYFLLAIDT 76 Query: 73 LDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYLKG 132 + K++GTI + P I +CTG L ++ E+G+V+ILP Q GIGS L+ M L Sbjct: 77 SNDKIIGTIEIGPASTLINSCTGGVLKNLYEIGTVFILPEYQRKGIGSLLLHTMFLTLLS 136 Query: 133 RGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI E+CLDSGYK AQ W +KFG+P V+KDYWG S HM+W + D P+ Sbjct: 137 RGITEYCLDSGYKNAQSIWTKKFGKPSYVLKDYWGESSDHMIWKKSLHDTPI 188 >ref|NP_979040.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] gb|AAS41648.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] Length = 187 Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 105/172 (61%), Gaps = 2/172 (1%) Query: 15 DDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA--K 72 DD++ ++ F I++ + EGL+ DDI++E++ K+Q + D YFL+A Sbjct: 12 DDLEELHLFFRIVITNTYKDEGLSQQLDDIENEINMKKQYLKTDFDSNGEKRYFLLAIDT 71 Query: 73 LDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYLKG 132 + K++GTI + P I +CT L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 72 NNDKIIGTIEVGPASTLITSCTNGVLKDLYEIGTVFILPDYQRKGIGSLLLHTMFLTLLS 131 Query: 133 RGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI EFCLDSGY++AQ W +KFGEP V+KDYWG S HM+W + D P+ Sbjct: 132 RGITEFCLDSGYRKAQSIWTKKFGEPSYVLKDYWGESSDHMIWKKSLHDTPI 183 >ref|NP_845061.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] gb|AAP26547.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] Length = 160 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 2/138 (1%) Query: 13 TPDDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA- 71 DD++ ++ F I++ F EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 10 NSDDLEELHSFFRIVITNTFKDEGLSQLSDDIENEINTKKQYLKNDFDSNGEKRYFLLAI 69 Query: 72 -KLDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYL 130 + K++GTI + P I +CTG L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 70 DTNNDKIIGTIEVGPASTLINSCTGGVLKDLYEIGTVFILPEYQKKGIGSFLLHTMFLTL 129 Query: 131 KGRGIEEFCLDSGYKRAQ 148 RGI E+CLDSGYK+ + Sbjct: 130 LSRGITEYCLDSGYKKRK 147 >ref|NP_656588.1| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis A2012] Length = 160 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 2/138 (1%) Query: 13 TPDDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA- 71 DD++ ++ F I++ F EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 10 NSDDLEELHSFFRIVITNTFKDEGLSQLSDDIENEINTKKQYLKNDFDSNGEKRYFLLAI 69 Query: 72 -KLDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYL 130 + K++GTI + P I +CTG L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 70 DTNNDKIIGTIEVGPASTLINSCTGGVLXDLYEIGTVFILPEYQKKGIGSFLLHTMFLTL 129 Query: 131 KGRGIEEFCLDSGYKRAQ 148 RGI E+CLDSGYK+ + Sbjct: 130 LSRGITEYCLDSGYKKRK 147 >ref|NP_655947.1| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis A2012] ref|NP_844490.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] gb|AAP25976.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] Length = 161 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 10/69 (14%) Query: 64 SNTYFLVAKLDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALI 123 NT+ VA+ +G+V+G + SP +L + ELG++Y+LP QG GIGSAL+ Sbjct: 55 ENTHLFVAEEEGEVIGFANFSPV----------RLQNEAELGAIYLLPDQQGKGIGSALL 104 Query: 124 KAMLAYLKG 132 + L LKG Sbjct: 105 QKGLTVLKG 113 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.137 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 285,377,425 Number of extensions: 11136736 Number of successful extensions: 29987 Number of sequences better than 1.0e-05: 6 Number of HSP's gapped: 30005 Number of HSP's successfully gapped: 6 Length of query: 184 Length of database: 757,237,578 Length adjustment: 118 Effective length of query: 66 Effective length of database: 436,855,896 Effective search space: 28832489136 Effective search space used: 28832489136 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 122 (51.6 bits)