BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0547.0011.p
         (91 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_842962.1| calcium/proton exchanger [Bacillus anthracis st...    79   4e-14
ref|NP_654356.1| hypothetical protein predicted by GeneMark [Bac...    79   4e-14
ref|NP_830301.1| Calcium/proton antiporter [Bacillus cereus ATCC...    78   7e-14
ref|ZP_00073257.1| COG0387: Ca2+/H+ antiporter [Trichodesmium er...    78   8e-14
dbj|BAD08687.1| Ca2+/H+ antiporter [Aphanothece halophytica]           77   9e-14

>ref|NP_842962.1| calcium/proton exchanger [Bacillus anthracis str. Ames]
 gb|AAP24448.1| calcium/proton exchanger [Bacillus anthracis str. Ames]
          Length = 354

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 51/90 (56%)

Query: 1   MLAMKNKIGAAVEIAVGSSLQIALFVAPVLIFASYFMGNTMDXXXXXXXXXXXXXXXXXX 60
           ++A KNK+  AVEIAVGS+LQIA+FVAPVL+  S F    M                   
Sbjct: 264 IMAYKNKVNIAVEIAVGSTLQIAMFVAPVLVLLSMFFAQRMPLVFTIPELVSMITAVFLT 323

Query: 61  XXXXQDGATNWYEGLLLLAVYMILGVSFYL 90
                DG TNW+EG  LLA Y+I+G+ FYL
Sbjct: 324 IAISNDGDTNWFEGGTLLAAYVIMGIGFYL 353


>ref|NP_654356.1| hypothetical protein predicted by GeneMark [Bacillus anthracis
           A2012]
          Length = 351

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 51/90 (56%)

Query: 1   MLAMKNKIGAAVEIAVGSSLQIALFVAPVLIFASYFMGNTMDXXXXXXXXXXXXXXXXXX 60
           ++A KNK+  AVEIAVGS+LQIA+FVAPVL+  S F    M                   
Sbjct: 261 IMAYKNKVNIAVEIAVGSTLQIAMFVAPVLVLLSMFFAQRMPLVFTIPELVSMITAVFLT 320

Query: 61  XXXXQDGATNWYEGLLLLAVYMILGVSFYL 90
                DG TNW+EG  LLA Y+I+G+ FYL
Sbjct: 321 IAISNDGDTNWFEGGTLLAAYVIMGIGFYL 350


>ref|NP_830301.1| Calcium/proton antiporter [Bacillus cereus ATCC 14579]
 gb|AAP07502.1| Calcium/proton antiporter [Bacillus cereus ATCC 14579]
          Length = 363

 Score = 77.8 bits (190), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 51/90 (56%)

Query: 1   MLAMKNKIGAAVEIAVGSSLQIALFVAPVLIFASYFMGNTMDXXXXXXXXXXXXXXXXXX 60
           ++A KNK+  AVEIA+GS+LQIA+FVAPVL+  S F    M                   
Sbjct: 273 IMAYKNKVNIAVEIAIGSTLQIAMFVAPVLVLLSMFFAQRMPLVFTIPELVSMITAVFLT 332

Query: 61  XXXXQDGATNWYEGLLLLAVYMILGVSFYL 90
                DG TNW+EG  LLA Y+I+G+ FYL
Sbjct: 333 IAISNDGDTNWFEGGTLLAAYVIMGIGFYL 362


>ref|ZP_00073257.1| COG0387: Ca2+/H+ antiporter [Trichodesmium erythraeum IMS101]
          Length = 372

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 51/88 (57%)

Query: 2   LAMKNKIGAAVEIAVGSSLQIALFVAPVLIFASYFMGNTMDXXXXXXXXXXXXXXXXXXX 61
           +AMKNK+  +V +AVGSSLQIALFVAPVLI     +G  MD                   
Sbjct: 276 VAMKNKMDLSVSVAVGSSLQIALFVAPVLILTGSLLGQPMDLNFNPFELVAVVVAVLIAN 335

Query: 62  XXXQDGATNWYEGLLLLAVYMILGVSFY 89
               DG ++W EG+LLLA Y ILG++FY
Sbjct: 336 SVSSDGRSDWLEGVLLLAAYTILGLAFY 363


>dbj|BAD08687.1| Ca2+/H+ antiporter [Aphanothece halophytica]
          Length = 373

 Score = 77.4 bits (189), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 53/88 (60%)

Query: 2   LAMKNKIGAAVEIAVGSSLQIALFVAPVLIFASYFMGNTMDXXXXXXXXXXXXXXXXXXX 61
           +AMKNK+  ++ +AVGS+LQIALFVAPVL+ A + MG  MD                   
Sbjct: 277 VAMKNKMDLSLSVAVGSTLQIALFVAPVLVIAGWIMGQPMDLDFNPFELVAVAVSVLIAN 336

Query: 62  XXXQDGATNWYEGLLLLAVYMILGVSFY 89
               DG +NW EG LLLA Y+++G++F+
Sbjct: 337 SISSDGKSNWLEGSLLLATYIVIGLAFF 364


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.328    0.140    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 87,534,961
Number of extensions: 1723078
Number of successful extensions: 5119
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 5054
Number of HSP's successfully gapped: 69
Length of query: 91
Length of database: 757,237,578
Length adjustment: 59
Effective length of query: 32
Effective length of database: 597,046,737
Effective search space: 19105495584
Effective search space used: 19105495584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 120 (50.8 bits)