BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0545.0044.p (1103 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_844228.1| helicase, putative [Bacillus anthracis str. Ame... 808 0.0 ref|NP_831519.1| SWF/SNF family helicase [Bacillus cereus ATCC 1... 808 0.0 emb|CAA67095.1| SNF [Bacillus cereus] 804 0.0 ref|NP_978193.1| helicase, putative [Bacillus cereus ATCC 10987]... 801 0.0 ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831] >gi|... 768 0.0 >ref|NP_844228.1| helicase, putative [Bacillus anthracis str. Ames] gb|AAP25714.1| helicase, putative [Bacillus anthracis str. Ames] Length = 1064 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/1099 (39%), Positives = 663/1099 (60%), Gaps = 52/1099 (4%) Query: 9 IRETCGDTFYKRGKAYYEAGRVHNLECNEIGNCYTAEVKGSKSYKVRIEFDEEAFIVDSD 68 I+E CG+T YKRG+AYY++ +V +E A VKG++ + V +E ++ +V + Sbjct: 10 IKEVCGETSYKRGEAYYKSNKVIVNHYDETKEICEATVKGNEDFHVTVEKAKKGDVV-AR 68 Query: 69 CACPAFKDYGS-CKHEAATLIAISRLGQKDSVKDKPQHLEQTTSFDLDLMLDSILKKQTA 127 C+CP+ + + C+H AA LI I+ Q + +Q T+ L D L+ ++ Sbjct: 69 CSCPSLASFQTYCQHVAAVLIQINYNQQTGGMGSVSSRNDQLTNGMFQLFADKPLRPKSK 128 Query: 128 QGKPAAGQAYKPAEQLISSFSESNTGPAHDSSSLFGDAEQLQFEFILKTGISHRTAAFSL 187 Q + F E L FI + ++ ++ L Sbjct: 129 QHR-------------------------------FDTREILDVAFIC-SPVATKSGGALL 156 Query: 188 EMRVGVKRLYVVSKINRFLEHVEQHLPYYFTSHFTFDPKKQQINPADLAFLNALILIKNT 247 +++ + + Y+++ I FL VE+ +++++ FT+ P + LI I + Sbjct: 157 GIQLKLAKTYLINHIREFLSKVEKRETFHYSNEFTYTPDIHSFKQETDVIIQHLIKIYHN 216 Query: 248 EKVYRTSXXXXXXXXXXXXXRAIAVPPLGWEKLKPLLSEVNVV-LGSFGQPGTRAELINE 306 EK+Y + I +PP W + LS V L Q ++ Sbjct: 217 EKMYEDALEVHAKQDESM----IFIPPASWNDMLSALSRAEYVQLKQNEQLFHGLQISKG 272 Query: 307 APPFSFSIGKGGPKDYVLSASGIEKCNVFPEYSSMIVEGKIYSQDPAALHRIEQLQQTL- 365 P F KG + L +G+ + V Y++ + +GK+Y R+ +LQ+ + Sbjct: 273 LLPLHFEFTKGNNGGFTLHIAGLNRVRVMEMYNNALYDGKLYHLPMEDCMRLIELQKMMI 332 Query: 366 -SASKGLAISSQQIEPFIQRVVPALRELGAVKVDKTVQERIIQPELQCKIYLDYTEGKLL 424 S S I ++E F+ +VVP L +LG V++D+ + +R+ P L+ K+YLD + +LL Sbjct: 333 RSNSNQFYIPENKMEHFVAKVVPGLMKLGTVRIDEGISDRVETPSLKAKLYLDRVKNRLL 392 Query: 425 TTLEFHYGDIVIDPLSSHQDYAKNGE-IILVRNVQKEDEIIGMLDRSSMNREGRQWVSAS 483 LEFHYG++VI+PL ++G+ + R+ +KE EI+ ++ S+ + + + Sbjct: 393 AGLEFHYGNVVINPLE------EDGQPSVFNRDEKKEKEILDIMSESAFAKTEGGYFMHN 446 Query: 484 ELGMYEALHEFVPSLEEYADIYLTAAAQNLIMKRQASPKVRADLNEGLDWLHISFEMEGL 543 E Y L+ VP+L+ DIY T A + I K +P +R E +DWL F+++G+ Sbjct: 447 EDAEYNFLYHIVPTLKGLVDIYATTAIKLRIHKGDTAPLIRVRRKERIDWLSFRFDIKGI 506 Query: 544 DEKETTRVMQAIVEKKKYIRLRSGAFLSLQTEGFHEFRTMADRLNLGKKDLKAPSIQLPS 603 E E V+ A+ EK+KY RL +G+ LSL+++ F+E + K+ L + +P Sbjct: 507 PEAEIKGVLVALEEKRKYYRLANGSLLSLESKEFNEINQFVKESGIRKEFLHGEEVNVPL 566 Query: 604 VHALQLPERRTSTKAMKWGKSLRLFLDQLKEPENMDFELPGQMKDILRDYQVKGFQWMKT 663 + +++ + +S++ ++ ++ P+ + F +P ++ ++R+YQV GF+WMKT Sbjct: 567 IRSVKWMNGLHEGNVLSLDESVQDLVESIQNPKKLKFTVPQTLRAVMREYQVYGFEWMKT 626 Query: 664 LSRFRFGGILADDMGLGKTIQSIAYICSELEENPEKT-KILIICPASLTYNWANEFASFA 722 L+ +RFGGILADDMGLGKT+QSIAYI S L E EK IL++ P+SL YNW +E FA Sbjct: 627 LAYYRFGGILADDMGLGKTLQSIAYIDSVLPEIREKKLPILVVSPSSLVYNWLSELKKFA 686 Query: 723 PEVKILVAAGQKEERSELLDGIDNEEAQVIITSYPLLRRDIDLYSGKSFHTLILDEAQAV 782 P ++ ++A G + ER ++L D E V+ITSYPLLRRDI Y+ + FHTL LDEAQA Sbjct: 687 PHIRAVIADGNQAERRKILK--DVAEFDVVITSYPLLRRDIRSYA-RPFHTLFLDEAQAF 743 Query: 783 KNAASQTAQAVKSIKAARKFALTGTPIENSIDELESIIGTVSPLLFSGRQSFRQLPADRI 842 KN +QTA+AVK+I+A +F LTGTP+ENS++EL SI V P L GR+ F L + I Sbjct: 744 KNPTTQTARAVKTIQAEYRFGLTGTPVENSLEELWSIFHVVFPELLPGRKEFGDLRREDI 803 Query: 843 SSIVAPFILRRLKKDVLEELPDRIETVQRTELLLEQKQLYLAYLSKLREDTEQDLQGEGF 902 + V PF+LRRLK+DVL+ELPD+IE +Q +ELL +QK+LY AYL+KLRE+T + L + Sbjct: 804 AKRVKPFVLRRLKEDVLKELPDKIEHLQSSELLPDQKRLYAAYLAKLREETLKHLDKDTL 863 Query: 903 QKSRMKILAGITRLRQLCCHPSLFVENYTGGSGKLDQLLELVEGCRASGKRMLVFSQFSS 962 +K++++ILAG+TRLRQ+CCHP+LFV++Y G S K +QLL+++E CR++GKR+L+FSQF+ Sbjct: 864 RKNKIRILAGLTRLRQICCHPALFVDDYKGSSAKFEQLLDILEECRSTGKRILIFSQFTK 923 Query: 963 MLQLIRESLTASGIIPFYLDGSTPAGERVELCRRFNEGEGEVFLISLKAGGTGLNLTGAD 1022 ML +I L I FYLDG+TP+ ERVELC RFNEGEG++FLISLKAGGTGLNLTGAD Sbjct: 924 MLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDLFLISLKAGGTGLNLTGAD 983 Query: 1023 TVILYDLWWNPAVEEQAVGRAHRMGQRHVVQVIRMITEGTIEEKILELQQRKKNLIEEII 1082 TVILYDLWWNPAVE+QA RA+RMGQ++ VQVI+++ GTIEEK+ ELQ+ KKNLI E+I Sbjct: 984 TVILYDLWWNPAVEQQAADRAYRMGQKNTVQVIKLVAHGTIEEKMHELQESKKNLIAEVI 1043 Query: 1083 ESGENKASRLSEEDIRELL 1101 E GE K S ++EE+IR++L Sbjct: 1044 EPGEEKLSSITEEEIRDIL 1062 >ref|NP_831519.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gb|AAP08720.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] Length = 1064 Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/1102 (40%), Positives = 661/1102 (59%), Gaps = 58/1102 (5%) Query: 9 IRETCGDTFYKRGKAYYEAGRV---HNLECNEIGNCYTAEVKGSKSYKVRIEFDEEAFIV 65 I+E CG+T YKRG+AYY++ +V H E EI C A VKG++ + V + ++ +V Sbjct: 10 IKEVCGETSYKRGEAYYKSNKVIIDHYDENKEI--C-EATVKGNEDFHVTVAKAKKGDVV 66 Query: 66 DSDCACPAFKDYGS-CKHEAATLIAISRLGQKDSVKDKPQHLEQTTSFDLDLMLDSILKK 124 + C+CP+ + + C+H AA LI I+ Q + +Q TS L D L+ Sbjct: 67 -AKCSCPSLASFQTYCQHVAAVLIQINYNQQIGGMSSTSSRNDQLTSGMFQLFADKPLRP 125 Query: 125 QTAQGKPAAGQAYKPAEQLISSFSESNTGPAHDSSSLFGDAEQLQFEFILKTGISHRTAA 184 ++ Q + F E L EFI T ++ R+ Sbjct: 126 KSKQHR-------------------------------FDTREILDIEFIC-TPVATRSGG 153 Query: 185 FSLEMRVGVKRLYVVSKINRFLEHVEQHLPYYFTSHFTFDPKKQQINPADLAFLNALILI 244 L +++ + ++Y ++ I FL VE+ ++ ++ FT+ P A + LI + Sbjct: 154 ALLGIQLKLAKVYFINHIREFLSKVEKRESFHCSNEFTYTPDVHSFKQETDAIIQQLIKM 213 Query: 245 KNTEKVYRTSXXXXXXXXXXXXXRAIAVPPLGWEKLKPLLSEVNVV-LGSFGQPGTRAEL 303 + EK+Y + I +PP W+ + LS+ V L Q ++ Sbjct: 214 YHNEKMYEDTLEVHAKQDESM----IFIPPASWKDMLFSLSKAEYVQLKQNEQLFQGLQV 269 Query: 304 INEAPPFSFSIGKGGPKDYVLSASGIEKCNVFPEYSSMIVEGKIYSQDPAALHRIEQLQQ 363 P F KG + L G+ + V Y++ + +GK+Y R+ +LQ+ Sbjct: 270 SKGLLPLHFEFTKGNNGGFTLHIEGLNRVQVMDMYNNALYDGKLYHLHIEDCMRLIELQK 329 Query: 364 TLSASKG--LAISSQQIEPFIQRVVPALRELGAVKVDKTVQERIIQPELQCKIYLDYTEG 421 +S S I ++E F+ +VVP L +LG V +D+ + +R+ P L+ K+YLD + Sbjct: 330 MMSRSNSNQFYIPESKMEHFVAKVVPGLMKLGTVHIDEVISDRVETPSLKAKLYLDRVKN 389 Query: 422 KLLTTLEFHYGDIVIDPLSSHQDYAKNGE-IILVRNVQKEDEIIGMLDRSSMNREGRQWV 480 +LL LEFHYG+++I+PL ++G+ + R+ +KE EI+ ++ S+ + + Sbjct: 390 RLLAGLEFHYGNVMINPLE------EDGQPSVFNRDEKKEKEILDIMSESAFAKTEGGYF 443 Query: 481 SASELGMYEALHEFVPSLEEYADIYLTAAAQNLIMKRQASPKVRADLNEGLDWLHISFEM 540 +E Y L+ VP+L+ DIY T A + I K A P +R E +DWL F++ Sbjct: 444 MHNEEAEYNFLYHVVPTLKGLVDIYATTAIKLRISKGDAVPLIRVRRKERIDWLSFRFDI 503 Query: 541 EGLDEKETTRVMQAIVEKKKYIRLRSGAFLSLQTEGFHEFRTMADRLNLGKKDLKAPSIQ 600 +G+ E E V+ A+ EK+KY RL +G+FLSL+++ F+E + K+ L + Sbjct: 504 KGIPEAEIKGVLAALEEKRKYYRLANGSFLSLESKEFNEINQFIKESGIRKEFLHGEEVN 563 Query: 601 LPSVHALQLPERRTSTKAMKWGKSLRLFLDQLKEPENMDFELPGQMKDILRDYQVKGFQW 660 +P + +++ + S++ ++ ++ P+ + F +P + +R YQV GF+W Sbjct: 564 VPLIRSVKWMNGLHEGNVLSLDDSVQELVENIQNPKKLKFAVPNTLNAEMRKYQVYGFEW 623 Query: 661 MKTLSRFRFGGILADDMGLGKTIQSIAYICSELEENPEKT-KILIICPASLTYNWANEFA 719 MKTL+ +RFGGILADDMGLGKT+QSIA+I S L E EK IL++ P+SL YNW +E Sbjct: 624 MKTLAHYRFGGILADDMGLGKTLQSIAFIDSVLTEVREKKLPILVVSPSSLVYNWFSELK 683 Query: 720 SFAPEVKILVAAGQKEERSELLDGIDNEEAQVIITSYPLLRRDIDLYSGKSFHTLILDEA 779 FAP ++ ++A G + ER ++L I E V+ITSYPLLRRDI LY+ + FHTL LDEA Sbjct: 684 KFAPHIRAVIADGIQAERRKILKDIT--EFDVVITSYPLLRRDIRLYA-RPFHTLFLDEA 740 Query: 780 QAVKNAASQTAQAVKSIKAARKFALTGTPIENSIDELESIIGTVSPLLFSGRQSFRQLPA 839 QA KN +QTA+AVK+I+A +F LTGTP+ENS++EL SI V P L GR+ F L Sbjct: 741 QAFKNPTTQTARAVKTIQAEYRFGLTGTPVENSLEELWSIFHVVFPELLPGRKEFGDLRR 800 Query: 840 DRISSIVAPFILRRLKKDVLEELPDRIETVQRTELLLEQKQLYLAYLSKLREDTEQDLQG 899 + I+ V PF+LRRLK DVL ELP++IE +Q +ELL +QK LY AYL+KLRE+T + L Sbjct: 801 EDIAKRVKPFVLRRLKGDVLNELPEKIEHLQSSELLPDQKSLYAAYLAKLREETLKHLDK 860 Query: 900 EGFQKSRMKILAGITRLRQLCCHPSLFVENYTGGSGKLDQLLELVEGCRASGKRMLVFSQ 959 + +K++++ILAG+TRLRQ+CCHP+LFV++Y G S K +QLLE++E CR++GKR+L+FSQ Sbjct: 861 DTLRKNKIRILAGLTRLRQICCHPALFVDDYKGSSAKFEQLLEILEECRSTGKRILIFSQ 920 Query: 960 FSSMLQLIRESLTASGIIPFYLDGSTPAGERVELCRRFNEGEGEVFLISLKAGGTGLNLT 1019 F+ ML +I L I FYLDGSTPA +RVELC RFNEGEG++FLISLKAGGTGLNLT Sbjct: 921 FTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDLFLISLKAGGTGLNLT 980 Query: 1020 GADTVILYDLWWNPAVEEQAVGRAHRMGQRHVVQVIRMITEGTIEEKILELQQRKKNLIE 1079 GADTVILYDLWWNPAVE+QA RA+RMGQ++ VQVI+++ GTIEEK+ ELQ+ KKNLI Sbjct: 981 GADTVILYDLWWNPAVEQQAADRAYRMGQKNTVQVIKLVAHGTIEEKMHELQESKKNLIA 1040 Query: 1080 EIIESGENKASRLSEEDIRELL 1101 E+IE GE K S ++EE+IR++L Sbjct: 1041 EVIEPGEEKLSSITEEEIRDIL 1062 >emb|CAA67095.1| SNF [Bacillus cereus] Length = 1064 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/1099 (39%), Positives = 660/1099 (60%), Gaps = 52/1099 (4%) Query: 9 IRETCGDTFYKRGKAYYEAGRVHNLECNEIGNCYTAEVKGSKSYKVRIEFDEEAFIVDSD 68 I+E CG+T YKRG+AYY++ +V +E A VKG++ ++V +E ++ +V + Sbjct: 10 IKEVCGETSYKRGEAYYKSNKVIVNYYDETKEICEATVKGNEDFRVTVEKAKKGDVV-AR 68 Query: 69 CACPAFKDYGS-CKHEAATLIAISRLGQKDSVKDKPQHLEQTTSFDLDLMLDSILKKQTA 127 C+CP+ + + C+H AA LI I+ Q + +Q T+ L D L+ ++ Sbjct: 69 CSCPSLASFQTYCQHVAAVLIQINYNQQTGGMGSVSSRNDQLTNGMFQLFADKPLRPKSK 128 Query: 128 QGKPAAGQAYKPAEQLISSFSESNTGPAHDSSSLFGDAEQLQFEFILKTGISHRTAAFSL 187 Q + F E L FI + ++ ++ L Sbjct: 129 QHR-------------------------------FDTREILDVAFIC-SPVAKKSGGALL 156 Query: 188 EMRVGVKRLYVVSKINRFLEHVEQHLPYYFTSHFTFDPKKQQINPADLAFLNALILIKNT 247 +++ + + Y ++ I FL VE+ ++ ++ FT+ P A + I I + Sbjct: 157 GIQLKLAKTYFINHIREFLSKVEKREAFHCSNEFTYTPDVHSFKQETDAIIQQFIKIYHN 216 Query: 248 EKVYRTSXXXXXXXXXXXXXRAIAVPPLGWEKLKPLLSEVNVV-LGSFGQPGTRAELINE 306 EK+Y + I +PP W + LS V L Q + Sbjct: 217 EKMYEDALEVHAKQDESM----IFIPPASWNDMLSALSRAEYVQLKQNEQLFQGLHISKG 272 Query: 307 APPFSFSIGKGGPKDYVLSASGIEKCNVFPEYSSMIVEGKIYSQDPAALHRIEQLQQTLS 366 P F KG + L G+ + V Y++ + +GK+Y R+ +LQ+ +S Sbjct: 273 LLPLHFEFTKGNNGGFTLHIDGLNRVRVMEMYNNALYDGKLYHLPMEDCMRLIELQKMMS 332 Query: 367 ASKG--LAISSQQIEPFIQRVVPALRELGAVKVDKTVQERIIQPELQCKIYLDYTEGKLL 424 S I ++E F+ +VVP L +LG V++D+ + +R+ P L+ K+YLD + +LL Sbjct: 333 RSNSNQFYIPENKMEHFVAKVVPGLMKLGTVRIDEVISDRVETPSLKAKLYLDRVKNRLL 392 Query: 425 TTLEFHYGDIVIDPLSSHQDYAKNGE-IILVRNVQKEDEIIGMLDRSSMNREGRQWVSAS 483 LEFHYG++VI+PL ++G+ + R+ +KE EI+ ++ S+ + + + Sbjct: 393 AGLEFHYGNVVINPLE------EDGQPSVFNRDEKKEKEILDIMSESAFAKTEGGYFMHN 446 Query: 484 ELGMYEALHEFVPSLEEYADIYLTAAAQNLIMKRQASPKVRADLNEGLDWLHISFEMEGL 543 E Y L+ VP+L+ DIY T A + I K +P +R E +DWL F+++G+ Sbjct: 447 EEAEYNFLYHIVPTLKGLVDIYATTAIKLRIHKGDTAPLIRVRRKERIDWLSFRFDIKGI 506 Query: 544 DEKETTRVMQAIVEKKKYIRLRSGAFLSLQTEGFHEFRTMADRLNLGKKDLKAPSIQLPS 603 E E V+ A+ EK+KY RL +G+ LSL+++ F+E + K+ L + +P Sbjct: 507 PEAEIKGVLAALEEKRKYYRLANGSLLSLESKEFNEINQFVKESGIRKEFLHGEEVNVPL 566 Query: 604 VHALQLPERRTSTKAMKWGKSLRLFLDQLKEPENMDFELPGQMKDILRDYQVKGFQWMKT 663 + +++ + +S++ ++ ++ P+ + F +P + ++R+YQV GF+WMKT Sbjct: 567 IRSVKWMNGLHEGNVLSLDESVQDLVESIQNPKKLKFTVPPTLHAVMREYQVYGFEWMKT 626 Query: 664 LSRFRFGGILADDMGLGKTIQSIAYICSELEENPEKT-KILIICPASLTYNWANEFASFA 722 L+ +RFGGILADDMGLGKT+QSIAYI S L E EK IL++ P+SL YNW +E FA Sbjct: 627 LAYYRFGGILADDMGLGKTLQSIAYIDSVLPEIREKKLPILVVSPSSLVYNWFSELKKFA 686 Query: 723 PEVKILVAAGQKEERSELLDGIDNEEAQVIITSYPLLRRDIDLYSGKSFHTLILDEAQAV 782 P ++ ++A G + ER ++L D E V+ITSYPLLRRD+ Y+ + FHTL LDEAQA Sbjct: 687 PHIRAVIADGNQTERRKILK--DVAEFDVVITSYPLLRRDVRSYA-RPFHTLFLDEAQAF 743 Query: 783 KNAASQTAQAVKSIKAARKFALTGTPIENSIDELESIIGTVSPLLFSGRQSFRQLPADRI 842 KN +QTA+AVK+I+A +F LTGTP+ENS++EL SI V P L GR+ F L + I Sbjct: 744 KNPTTQTARAVKTIQAEYRFGLTGTPVENSLEELWSIFHVVFPELLPGRKEFGDLRREDI 803 Query: 843 SSIVAPFILRRLKKDVLEELPDRIETVQRTELLLEQKQLYLAYLSKLREDTEQDLQGEGF 902 ++ V PF+LRRLK+DVL+ELPD+IE +Q +ELL +QK+LY AYL+KLRE+T + L + Sbjct: 804 ANAVKPFVLRRLKEDVLQELPDKIEHLQSSELLPDQKRLYAAYLAKLREETLKHLDKDTL 863 Query: 903 QKSRMKILAGITRLRQLCCHPSLFVENYTGGSGKLDQLLELVEGCRASGKRMLVFSQFSS 962 +K++++ILAG+TRLRQ+C HP+LFV++Y G S KL+QLL+++E CR++GKR+L+FSQF+ Sbjct: 864 RKNKIRILAGLTRLRQICNHPALFVDDYKGSSAKLEQLLDILEECRSTGKRILIFSQFTK 923 Query: 963 MLQLIRESLTASGIIPFYLDGSTPAGERVELCRRFNEGEGEVFLISLKAGGTGLNLTGAD 1022 ML +I L I FYLDG+TP+ ERVELC RFNEGEG++FLISLKAGGTGLNLTGAD Sbjct: 924 MLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDLFLISLKAGGTGLNLTGAD 983 Query: 1023 TVILYDLWWNPAVEEQAVGRAHRMGQRHVVQVIRMITEGTIEEKILELQQRKKNLIEEII 1082 TVILYDLWWNPAVE+QA RA+RMGQ++ VQVI+++ GTIEEK+ ELQ+ KK+LI E+I Sbjct: 984 TVILYDLWWNPAVEQQAADRAYRMGQKNTVQVIKLVAHGTIEEKMHELQESKKHLIAEVI 1043 Query: 1083 ESGENKASRLSEEDIRELL 1101 E GE K S ++EE+IR++L Sbjct: 1044 EPGEEKLSSITEEEIRDIL 1062 >ref|NP_978193.1| helicase, putative [Bacillus cereus ATCC 10987] gb|AAS40801.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 1064 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/1099 (39%), Positives = 659/1099 (59%), Gaps = 52/1099 (4%) Query: 9 IRETCGDTFYKRGKAYYEAGRVHNLECNEIGNCYTAEVKGSKSYKVRIEFDEEAFIVDSD 68 I+E CG+T YKRG+AYY++ +V +E A VKG++ ++V +E ++ +V + Sbjct: 10 IKEVCGETSYKRGEAYYKSNKVIVNYYDETKEICEATVKGNEDFRVTVEKAKKGDVV-AR 68 Query: 69 CACPAFKDYGS-CKHEAATLIAISRLGQKDSVKDKPQHLEQTTSFDLDLMLDSILKKQTA 127 C+CP+ + + C+H AA LI I+ Q + +Q T+ L D L+ ++ Sbjct: 69 CSCPSLASFQTYCQHVAAVLIQINYNQQTGGMGSVSSRNDQLTNGMFQLFADKPLRPKSK 128 Query: 128 QGKPAAGQAYKPAEQLISSFSESNTGPAHDSSSLFGDAEQLQFEFILKTGISHRTAAFSL 187 Q + F E L FI + ++ ++ L Sbjct: 129 QHR-------------------------------FDTREILDVAFIC-SPVAKKSGGALL 156 Query: 188 EMRVGVKRLYVVSKINRFLEHVEQHLPYYFTSHFTFDPKKQQINPADLAFLNALILIKNT 247 +++ + + Y ++ I FL VE+ ++ ++ FT+ P A + I I + Sbjct: 157 GIQLKLAKTYFINHIREFLSKVEKREAFHCSNEFTYTPDVHSFKQETDAIIQQFIKIYHN 216 Query: 248 EKVYRTSXXXXXXXXXXXXXRAIAVPPLGWEKLKPLLSEVNVV-LGSFGQPGTRAELINE 306 EK+Y + I +PP W + LS V L Q + Sbjct: 217 EKMYEDALEVHAKQDESM----IFIPPASWNDMLSALSRAEYVQLKQNEQLFQGLHISKG 272 Query: 307 APPFSFSIGKGGPKDYVLSASGIEKCNVFPEYSSMIVEGKIYSQDPAALHRIEQLQQTLS 366 P F KG + L G+ + V Y++ + +GK+Y R+ +LQ+ +S Sbjct: 273 LLPLHFEFTKGNNGGFTLHIDGLNRVRVMEMYNNALYDGKLYHLPMEDCMRLIELQKMMS 332 Query: 367 ASKG--LAISSQQIEPFIQRVVPALRELGAVKVDKTVQERIIQPELQCKIYLDYTEGKLL 424 S I ++E F+ +VVP L +LG V++D+ + +R+ P L+ K+YLD + +LL Sbjct: 333 RSNSNQFYIPENKMEHFVAKVVPGLMKLGTVRIDEVISDRVETPSLKAKLYLDRVKNRLL 392 Query: 425 TTLEFHYGDIVIDPLSSHQDYAKNGE-IILVRNVQKEDEIIGMLDRSSMNREGRQWVSAS 483 LEFHYG++VI+PL ++G+ + R+ +KE EI+ ++ S+ + + + Sbjct: 393 AGLEFHYGNVVINPLE------EDGQPSVFNRDEKKEKEILDIMSESAFAKTEGGYFMHN 446 Query: 484 ELGMYEALHEFVPSLEEYADIYLTAAAQNLIMKRQASPKVRADLNEGLDWLHISFEMEGL 543 E Y L+ VP+L+ DIY T A + I K +P +R E +DWL F+++G+ Sbjct: 447 EEAEYNFLYHIVPTLKGLVDIYATTAIKLRIHKGDTAPLIRVRRKERIDWLSFRFDIKGI 506 Query: 544 DEKETTRVMQAIVEKKKYIRLRSGAFLSLQTEGFHEFRTMADRLNLGKKDLKAPSIQLPS 603 E E V+ A+ EK+KY RL +G+ LSL+++ F+E + K+ L + +P Sbjct: 507 PEAEIKGVLAALEEKRKYYRLANGSLLSLESKEFNEINQFVKESGIRKEFLHGEEVNVPL 566 Query: 604 VHALQLPERRTSTKAMKWGKSLRLFLDQLKEPENMDFELPGQMKDILRDYQVKGFQWMKT 663 + +++ + +S++ ++ ++ P+ + F +P + ++R+YQV GF+WMKT Sbjct: 567 IRSVKWMNGLHEGNVLSLDESVQDLVESIQNPKKLKFTVPPTLHAVMREYQVYGFEWMKT 626 Query: 664 LSRFRFGGILADDMGLGKTIQSIAYICSELEENPEKT-KILIICPASLTYNWANEFASFA 722 L+ +RFGGILADDMGLGKT+QSIAYI S L E EK IL++ P+SL YNW +E FA Sbjct: 627 LAYYRFGGILADDMGLGKTLQSIAYIDSVLPEIREKKLPILVVSPSSLVYNWFSELKKFA 686 Query: 723 PEVKILVAAGQKEERSELLDGIDNEEAQVIITSYPLLRRDIDLYSGKSFHTLILDEAQAV 782 P ++ ++A G + ER ++L D E V+ITSYPLLRRD+ Y+ + FHTL LDEAQA Sbjct: 687 PHIRAVIADGNQTERRKILK--DVAEFDVVITSYPLLRRDVRSYA-RPFHTLFLDEAQAF 743 Query: 783 KNAASQTAQAVKSIKAARKFALTGTPIENSIDELESIIGTVSPLLFSGRQSFRQLPADRI 842 KN +QTA+AVK+I+A +F LTGTP+ENS++EL SI V P L GR+ F L + I Sbjct: 744 KNPTTQTARAVKTIQAEYRFGLTGTPVENSLEELWSIFHVVFPELLPGRKEFGDLRREDI 803 Query: 843 SSIVAPFILRRLKKDVLEELPDRIETVQRTELLLEQKQLYLAYLSKLREDTEQDLQGEGF 902 + V PF+LRRLK+DVL+ELPD+IE +Q +ELL +QK+LY AYL+KLRE+T + L + Sbjct: 804 AKRVKPFVLRRLKEDVLQELPDKIEHLQSSELLPDQKRLYAAYLAKLREETLKHLDKDTL 863 Query: 903 QKSRMKILAGITRLRQLCCHPSLFVENYTGGSGKLDQLLELVEGCRASGKRMLVFSQFSS 962 +K++++ILAG+TRLRQ+C HP+LFV++Y G S KL+QLL+++E CR++GKR+L+FSQF+ Sbjct: 864 RKNKIRILAGLTRLRQICNHPALFVDDYKGSSAKLEQLLDILEECRSTGKRILIFSQFTK 923 Query: 963 MLQLIRESLTASGIIPFYLDGSTPAGERVELCRRFNEGEGEVFLISLKAGGTGLNLTGAD 1022 ML +I L I FYLDG+TP+ ERVELC RFNEGEG++FLISLKAGGTGLNLTGAD Sbjct: 924 MLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDLFLISLKAGGTGLNLTGAD 983 Query: 1023 TVILYDLWWNPAVEEQAVGRAHRMGQRHVVQVIRMITEGTIEEKILELQQRKKNLIEEII 1082 TVILYDLWWNPAVE+QA RA+RMGQ++ VQVI+++ GTIEEK+ ELQ+ KK+LI E+I Sbjct: 984 TVILYDLWWNPAVEQQAADRAYRMGQKNTVQVIKLVAHGTIEEKMHELQESKKHLIAEVI 1043 Query: 1083 ESGENKASRLSEEDIRELL 1101 E GE K S ++EE+IR++L Sbjct: 1044 EPGEEKLSSITEEEIRDIL 1062 >ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831] dbj|BAC15031.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1056 Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/1102 (38%), Positives = 647/1102 (58%), Gaps = 59/1102 (5%) Query: 8 EIRETCGDTFYKRGKAYYEAGRVHNLECNEIGNCYTAEVKGSKSYKVRIEF-DEEAFIVD 66 +I++ FYKRG YY+ +V ++ + N +TA V+GS+ Y V I D E +D Sbjct: 8 DIQKLFPSAFYKRGLTYYKNDQVKDVVFDRNHNVWTATVQGSEDYFVEIGLTDMEKGSID 67 Query: 67 SDCACPAFKDYGSCKHEAATLIAISRLGQKDSVKDKPQHLEQTTSFDLDLMLDSILKKQT 126 + C CPAF+ +GSCKH A+LIAIS L + + +++ F Sbjct: 68 TFCDCPAFETFGSCKHIVASLIAISTLENNGDASIRQPNFYRSSRF-------------- 113 Query: 127 AQGKPAAGQAYKPAEQLISSFSESNTGPAHDSSSLFGD---AEQLQFEFILKTGISHRTA 183 A P + + E N + S G +LQ E +KTG HR Sbjct: 114 ---IEAMSNILTP----LDAVEEENYSSSEMSVEYIGSWTYDRRLQLE--IKTGEQHR-- 162 Query: 184 AFSLEMRVGVKRLYVVSKINRFLEHVEQHLPYYFTSHFTFDPKKQQINPADLAFLNALIL 243 YVV + FL+ V+ P+ FT FT++P AD+ L L Sbjct: 163 -------------YVVRNVASFLDAVQDQEPFSFTKKFTYEPSIHSFLEADMEILRILHD 209 Query: 244 IKNTEKVYRTSXXXXXXXXXXXXXRAIAVPPLGWEKLKPLLSEVNVVLGSFGQPGTRAEL 303 + E++Y + R + +PP + L L + N + +L Sbjct: 210 LCKNEELYDS----YTFGGRSTDRRYVTIPPYVVKDLLFKLVDRNFYIVDNVTQYKDIQL 265 Query: 304 INEAPPFSFSIGKGGPKDYVLSASGIEKCNVFPEYSSMIVEGKIYSQDPAALHRIEQLQQ 363 PF F I K + VLS S +++ FP Y+ + +G Y + ++Q+++ Sbjct: 266 QENELPFQFYITKQD-EHVVLSMSELKETIFFPLYNILFQQGVFYFPTYEQIPVLQQMEK 324 Query: 364 TLSASKGLAISSQQIEPFIQRVVPALRELGAVKVDKTVQERIIQPELQCKIYLDYTEGKL 423 + +Q + F+ V+P+L+ +G + +D + E +I+ LQ K YL+ +G + Sbjct: 325 FRFEDMNFDVPKEQTDTFLSEVIPSLQRIGDIDMDDHLSEELIKAPLQAKCYLELRDGLI 384 Query: 424 LTTLEFHYGDIVIDPLSSHQDYAKNGEIILVRNVQKEDEIIGMLDRSSMNREGRQ-WVSA 482 + LE+ YG IDP +D+ +++++R+V +E I+ ++ ++ G++ ++ A Sbjct: 385 IGKLEYQYGSHRIDPFQGKKDH----QVMIIRDVPQEKLIMKYIEDANFRYNGKELYMDA 440 Query: 483 SELGMYEALHEFVPSLEEYADIYLTAAAQNLIMKRQASPKVRADLNEGLDWLHISFEMEG 542 E +Y L+ +P L+ Y +++L++ + L ++ + P + + L I F ++G Sbjct: 441 EEEDLYHFLYHVLPYLDNYVELFLSSEFRGLFIENEPEPYTSVRMEGQSNLLEIGFNIDG 500 Query: 543 LDEKETTRVMQAIVEKKKYIRLRSGAFLSLQTEGFHEFRTMADRLNLGKKDLKAPSIQLP 602 +++ E +++QA++E+K++ RL+SG ++L+TE F + + D + + K++L +Q+P Sbjct: 501 INDNEVNKILQAVIERKRFFRLQSGQMMNLETEEFSSMQRLFDDMRISKEELLDGKVQMP 560 Query: 603 SVHALQLPERRTSTKAMKWGKSLRLFLDQLKEPENMDFELPGQMKDILRDYQVKGFQWMK 662 + QL + + K + R L L PE +E+P ++ LR YQ G+QW K Sbjct: 561 AYRGSQLDDLIETKK--HYDPHFRDLLSHLHSPEEQVYEIPENVQANLRSYQKVGYQWFK 618 Query: 663 TLSRFRFGGILADDMGLGKTIQSIAYICSELEENPEKT-KILIICPASLTYNWANEFASF 721 +LS++ GGILADDMGLGKT+QSI Y+ S E N E LI+ P+S+ YNW NE F Sbjct: 619 SLSQYHLGGILADDMGLGKTLQSITYLVS--ESNGETIGPHLIVVPSSVVYNWKNELEKF 676 Query: 722 APEVKILVAAGQKEERSELLDGIDNEEAQVIITSYPLLRRDIDLYSGKSFHTLILDEAQA 781 AP +++ V G ER +++ N++ + ITSY LR+DI+ Y +F TL+LDEAQ Sbjct: 677 APHLQVAVLTGNPIERHQVMSESTNKD--IWITSYATLRQDIEFYQEITFQTLLLDEAQY 734 Query: 782 VKNAASQTAQAVKSIKAARKFALTGTPIENSIDELESIIGTVSPLLFSGRQSFRQLPADR 841 +KN ++T++A++ IKA R+FAL+GTPIENSI+EL SI V P L ++SF+QL + Sbjct: 735 IKNYQTKTSRAIRQIKATRRFALSGTPIENSIEELWSIFQVVLPGLMPDQRSFKQLEPKK 794 Query: 842 ISSIVAPFILRRLKKDVLEELPDRIETVQRTELLLEQKQLYLAYLSKLREDTEQDLQGEG 901 I++I PFILRRLK+DVL+ELP++IE+V +EL EQK LY+ YL +++++ Q + G Sbjct: 795 IAAITRPFILRRLKQDVLKELPEKIESVHVSELTREQKDLYVGYLRQVQQEAVQSFKENG 854 Query: 902 FQKSRMKILAGITRLRQLCCHPSLFVENYTGGSGKLDQLLELVEGCRASGKRMLVFSQFS 961 FQ++RMKILAG+TRLRQ+CCHPS+F+ENY G SGKL+QL+E ++ +GKRML+FSQF+ Sbjct: 855 FQQNRMKILAGLTRLRQICCHPSMFIENYEGASGKLEQLMETIKTALDNGKRMLIFSQFT 914 Query: 962 SMLQLIRESLTASGIIPFYLDGSTPAGERVELCRRFNEGEGEVFLISLKAGGTGLNLTGA 1021 SM ++I+E L G FYL G T + ERVE+ RFN GE ++FLISLKAGGTGLNLTGA Sbjct: 915 SMHEIIQERLKKEGYGYFYLHGQTSSKERVEMSERFNHGENDIFLISLKAGGTGLNLTGA 974 Query: 1022 DTVILYDLWWNPAVEEQAVGRAHRMGQRHVVQVIRMITEGTIEEKILELQQRKKNLIEEI 1081 DTVIL+DLWWNPAVE+QA GRAHR GQ+ VVQVIR++TEGTIEEKI +LQQRK+ LI+++ Sbjct: 975 DTVILFDLWWNPAVEDQATGRAHRFGQKKVVQVIRLVTEGTIEEKIYDLQQRKRELIDQV 1034 Query: 1082 IESGENKASRLSEEDIRELLKM 1103 I+ GE S L+E+DI+ELL + Sbjct: 1035 IQPGETMLSSLNEDDIKELLSL 1056 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,545,987,184 Number of extensions: 64505872 Number of successful extensions: 176229 Number of sequences better than 1.0e-05: 1121 Number of HSP's gapped: 172677 Number of HSP's successfully gapped: 1450 Length of query: 1103 Length of database: 757,237,578 Length adjustment: 136 Effective length of query: 967 Effective length of database: 387,984,114 Effective search space: 375180638238 Effective search space used: 375180638238 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)