BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0545.0006.p (195 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_692906.1| nicotinate-nucleotide adenylyltransferase [Ocea... 189 4e-47 ref|ZP_00183718.1| hypothetical protein Exigu082301 [Exiguobacte... 174 1e-42 ref|NP_242192.1| nicotinate-nucleotide adenylyltransferase [Baci... 172 3e-42 ref|ZP_00036784.1| COG1057: Nicotinic acid mononucleotide adenyl... 172 3e-42 ref|NP_390442.1| similar to hypothetical proteins [Bacillus subt... 168 6e-41 >ref|NP_692906.1| nicotinate-nucleotide adenylyltransferase [Oceanobacillus iheyensis HTE831] sp|Q8EPV1|NADD_OCEIH Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) dbj|BAC13941.1| nicotinate-nucleotide adenylyltransferase [Oceanobacillus iheyensis HTE831] Length = 191 Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 84/188 (44%), Positives = 126/188 (67%), Gaps = 7/188 (3%) Query: 1 MGGTFDPLHIGHMMAAETARESYALEEVWFMPSHIPPHKHEAGASGEERLAMVEGAVRNH 60 +GGTFDP H+GH++ AE R + L+E+WF+P++ PPHK + S + R +M++ A+ +H Sbjct: 7 LGGTFDPPHLGHLLIAEEVRRAKELDEIWFIPTNTPPHKEDTTTSADHRTSMIQLAIDSH 66 Query: 61 AAFGILDLEIARGGVSYTFETITMLQEEYPEHEFFFIVGADMVQYLPKWHGIEELVRRLT 120 +F + D+E+ R G SYT++TI L + YP H F+FI+G DMV++LPKWH I+EL+ +T Sbjct: 67 PSFKLNDMELKREGKSYTYDTIQELTDLYPSHTFYFIIGGDMVEFLPKWHRIDELLEMIT 126 Query: 121 FIGVGRPGTPLDLAALPGFIAEKVLLADMPLVDISSTMLRARAAEGKSIRYMVPDAVYDY 180 FIGV RPG L + F+ D+P + +SST+LR R + IRY++PD+V Y Sbjct: 127 FIGVSRPGYSLQTSYPVDFV-------DIPTIQLSSTILRERLQNREWIRYLLPDSVMQY 179 Query: 181 VQRSGLYG 188 V+ LYG Sbjct: 180 VREHQLYG 187 >ref|ZP_00183718.1| hypothetical protein Exigu082301 [Exiguobacterium sp. 255-15] Length = 189 Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 83/189 (43%), Positives = 117/189 (61%), Gaps = 5/189 (2%) Query: 1 MGGTFDPLHIGHMMAAETARESYALEEVWFMPSHIPPHKHEAGASGEERLAMVEGAVRNH 60 MGGTFDP HIGH++ AE A+E L+ VWF+P+ +PPHK S +RL +V AVR++ Sbjct: 6 MGGTFDPPHIGHLLIAEQAKEQLQLDAVWFLPAKLPPHKQSTVTSAAKRLELVRAAVRDN 65 Query: 61 AAFGILDLEIARGGVSYTFETITMLQEEYPEHEFFFIVGADMVQYLPKWHGIEELVRRLT 120 F + ++E R SYTF+TI L+ YPEH FFF++GAD + L WH E+L + + Sbjct: 66 QDFSVSEIEFERETKSYTFDTIRELKRRYPEHAFFFLIGADSLVSLGTWHRSEKLYKEIE 125 Query: 121 FIGVGRPGTPLDLAALPGFIAEKVLLADMPLVDISSTMLRARAAEGKSIRYMVPDAVYDY 180 F V RPG+ + +V DMPL+++SST +R R A G+SIRY+VP+ V Sbjct: 126 FGAVARPGSRYLIPE-----GARVTAVDMPLLEVSSTDIRQRVARGRSIRYLVPEPVRQL 180 Query: 181 VQRSGLYGT 189 ++ LY T Sbjct: 181 IEEWNLYAT 189 >ref|NP_242192.1| nicotinate-nucleotide adenylyltransferase [Bacillus halodurans] sp|Q9KD91|NADD_BACHD Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) pir||F83815 hypothetical protein BH1326 [imported] - Bacillus halodurans (strain C-125) dbj|BAB05045.1| nicotinate-nucleotide adenylyltransferase [Bacillus halodurans] Length = 207 Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 7/192 (3%) Query: 1 MGGTFDPLHIGHMMAAETARESYALEEVWFMPSHIPPHK-HEAGASGEERLAMVEGAVR- 58 +GGTFDP HIGH++ A+ A L+EVWF+P IPPHK E AS ++RLAM++ A++ Sbjct: 7 LGGTFDPPHIGHLLLAQEAIHCADLDEVWFVPVGIPPHKEREEIASNDDRLAMIKRAIKG 66 Query: 59 NHAAFGILDLEIARGGVSYTFETITMLQEEYPEHEFFFIVGADMVQYLPKWHGIEELVRR 118 F I +E+ R G SYT +T+ L +++P+ FFFI+G DMV+ LP W GI+EL+ Sbjct: 67 KETLFNICTIELEREGKSYTIDTVRTLTKKHPDVRFFFIIGGDMVKSLPTWKGIDELLAT 126 Query: 119 LTFIGVGRPGTPLDLAALPGFIAEKVLLADMPLVDISSTMLRARAAEGKSIRYMVPDAVY 178 +TFIG RPG LD ++++L + P V++SSTM+R R EGK I Y++P V Sbjct: 127 VTFIGFKRPGVLLDSPY-----QDQLMLVEGPEVNVSSTMIRERMTEGKPISYLLPLDVE 181 Query: 179 DYVQRSGLYGTQ 190 Y+ GLY T Sbjct: 182 RYIYEKGLYKTN 193 >ref|ZP_00036784.1| COG1057: Nicotinic acid mononucleotide adenylyltransferase [Enterococcus faecium] Length = 218 Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 8/188 (4%) Query: 1 MGGTFDPLHIGHMMAAETARESYALEEVWFMPSHIPPHKHEAGA-SGEERLAMVEGAVRN 59 +GGTF+P+H+ H++ AE A + L+ V+ MPS+ PPH E + RL M+E AV + Sbjct: 34 LGGTFNPVHLAHLVMAEQAGRNLGLDRVFLMPSYQPPHVDEKQTIDAKHRLNMLELAVED 93 Query: 60 HAAFGILDLEIARGGVSYTFETITMLQEEYPEHEFFFIVGADMVQYLPKWHGIEELVRRL 119 + I +E+ARGG SYT++T+ L + P+ +++FI+G DMV+YLPKW+ I+EL + Sbjct: 94 NPFLQIETIELARGGKSYTYDTMKELTQNNPDTDYYFIIGGDMVEYLPKWYKIDELTSMV 153 Query: 120 TFIGVGRPGTPLDLAALPGFIAEKVLLADMPLVDISSTMLRARAAEGKSIRYMVPDAVYD 179 F+G+ RPG D V+ D+P +DISST +R + EG SIRY+VPD V D Sbjct: 154 NFVGIRRPGYTTDTPY-------PVIWVDVPEIDISSTKIRQKIKEGCSIRYLVPDKVID 206 Query: 180 YVQRSGLY 187 Y+Q GLY Sbjct: 207 YIQNEGLY 214 >ref|NP_390442.1| similar to hypothetical proteins [Bacillus subtilis] sp|P54455|NADD_BACSU Nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) pir||F69951 conserved hypothetical protein yqeJ - Bacillus subtilis dbj|BAA12447.1| YqeJ [Bacillus subtilis] emb|CAB14506.1| yqeJ [Bacillus subtilis subsp. subtilis str. 168] Length = 189 Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 81/194 (41%), Positives = 122/194 (62%), Gaps = 16/194 (8%) Query: 1 MGGTFDPLHIGHMMAAETARESYALEEVWFMPSHIPPHK-HEAGASGEERLAMVEGAVRN 59 GGTFDP H GH++ A L+E+WFMP+ IPPHK +E R+ M++ A+++ Sbjct: 7 FGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQS 66 Query: 60 HAAFGILDLEIARGGVSYTFETITMLQEEYPEHEFFFIVGADMVQYLPKWHGIEELVRRL 119 + +F + +E+ R G SYTF+T+++L++ YP + FFI+GADM++YLPKW+ ++EL+ + Sbjct: 67 NPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLI 126 Query: 120 TFIGVGRPG----TPLDLAALPGFIAEKVLLADMPLVDISSTMLRARAAEGKSIRYMVPD 175 FIGV RPG TP L L AD+P ++SSTM+R R K Y++PD Sbjct: 127 QFIGVKRPGFHVETPYPL-----------LFADVPEFEVSSTMIRERFKSKKPTDYLIPD 175 Query: 176 AVYDYVQRSGLYGT 189 V YV+ +GLY + Sbjct: 176 KVKKYVEENGLYES 189 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.138 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 293,092,424 Number of extensions: 11399011 Number of successful extensions: 27281 Number of sequences better than 1.0e-05: 285 Number of HSP's gapped: 26965 Number of HSP's successfully gapped: 285 Length of query: 195 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 76 Effective length of database: 434,140,797 Effective search space: 32994700572 Effective search space used: 32994700572 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 122 (51.6 bits)