BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0544.0051.p
         (199 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_659958.1| unknown [Rhizobium etli] >gi|21467308|gb|AAM549...   156   2e-37
gb|EAA51019.1| hypothetical protein MG04778.4 [Magnaporthe grise...   102   4e-21

>ref|NP_659958.1| unknown [Rhizobium etli]
 gb|AAM54971.1| unknown [Rhizobium etli]
          Length = 540

 Score =  156 bits (395), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/186 (42%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 5   LQQEQPERTMVFAFVTGHFRLPDF-KGTSQATSTWMEAHSELWDGGSGHMKAVAGITVEH 63
           L +    R++VF  VTGHF+L  F +  +QAT+TW+E H ELWDG  GH KAVAG T+EH
Sbjct: 343 LPKSARNRSLVFVLVTGHFQLAQFGRHGNQATATWLEMHPELWDGKPGHAKAVAGATIEH 402

Query: 64  LGSLEWKDD-ASGHYGPTGQMTTEFTYAGNAMMETIWLKAVEHRSATRTVILR-GHNMLE 121
           LG  EW+DD A GH  PTG+   +  Y  N  M  +++ A   R   R +I+      + 
Sbjct: 403 LGCTEWRDDFAKGHPAPTGKPELDLIYTSNKSMSGVYIAAARGRKKVRALIVAPAAAQVM 462

Query: 122 FGESQPLFEAGIPVIGFIPMPDYLTVNSENREMDKFDLDLMHAQVESLLKAVNLVDGTPT 181
            GE QPL+ +GIP I   P+PDYL        +D+ D D    QVE+  + V+L+D  P 
Sbjct: 463 LGEGQPLYASGIPTISSCPIPDYLCQVLPGGGLDRLDPDYAFQQVETFARTVDLLDRMPR 522

Query: 182 EELGKV 187
            E+G V
Sbjct: 523 GEIGIV 528


>gb|EAA51019.1| hypothetical protein MG04778.4 [Magnaporthe grisea 70-15]
          Length = 476

 Score =  102 bits (255), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 99/190 (52%), Gaps = 19/190 (10%)

Query: 3   RYLQQEQPERTMVFAFVTGHFRLPDFKGTSQATSTWMEAHSELWDGGSGHMKAVAGITVE 62
           RYL +  P RT V  F+TGH R   F  T ++TS WM  H ELW+G  G MKAV     E
Sbjct: 288 RYLAEHPPRRTTVLGFITGHIRSAPFTETKRSTSRWMAEHPELWNGTCG-MKAVFASCAE 346

Query: 63  HLGSLEWKDD-ASGHYGPTGQMTTEFTYAGNAMMETIWLKAVEHRSA----TRTVILRGH 117
           HLG++ + +D A+G Y  TG+   E  YA  A +  +  +  + R A    TR V     
Sbjct: 347 HLGAVAFAEDVAAGTYESTGRPEDEILYASTAELTALLRR--QWRGADFKVTRVVDPNQG 404

Query: 118 NMLEFGESQPLFEAGIPVIGFIPMPDYLTVNSENREMDKFD----LDL--MHAQVES--- 168
            + +FGE  P F AGIP +  I  P +L   +E   +D FD    +DL  +  QV+S   
Sbjct: 405 PVEQFGEGLPFFWAGIPEVSLITSPSWLL--NEFSHLDDFDERQLIDLKSLERQVDSFVG 462

Query: 169 LLKAVNLVDG 178
           L + V+ +DG
Sbjct: 463 LWRTVDTMDG 472


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.319    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 314,427,126
Number of extensions: 12423728
Number of successful extensions: 24595
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 24589
Number of HSP's successfully gapped: 2
Length of query: 199
Length of database: 757,237,578
Length adjustment: 119
Effective length of query: 80
Effective length of database: 434,140,797
Effective search space: 34731263760
Effective search space used: 34731263760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 123 (52.0 bits)