BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0544.0047.p
         (67 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_306876.1| ENSANGP00000000376 [Anopheles gambiae] >gi|2129...    87   2e-16
ref|NP_422253.1| hypothetical protein [Caulobacter crescentus CB...    56   3e-07
gb|EAJ84157.1| unknown [environmental sequence]                        55   7e-07

>ref|XP_306876.1| ENSANGP00000000376 [Anopheles gambiae]
 gb|EAA02668.1| ENSANGP00000000376 [Anopheles gambiae str. PEST]
          Length = 112

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 46/63 (73%)

Query: 1   VFLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPM 60
           +F+G G  FLIGPE+E WDL ML+RQ S   FL+F  N+DY+   GHR AAIEDSRLLP+
Sbjct: 49  LFIGKGDLFLIGPENEYWDLCMLVRQKSVSDFLSFEQNEDYMKITGHRIAAIEDSRLLPL 108

Query: 61  AEL 63
            E 
Sbjct: 109 EEF 111


>ref|NP_422253.1| hypothetical protein [Caulobacter crescentus CB15]
 pir||A87678 hypothetical protein CC3459 [imported] - Caulobacter crescentus
 gb|AAK25421.1| hypothetical protein [Caulobacter crescentus CB15]
          Length = 143

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1   VFLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLL 58
           V+ G     L GP DE+WDL  +    +A +FLA   N DY   + HR AA+EDSRL+
Sbjct: 73  VWAGSPEVVLTGPSDERWDLAFIAEYPNAGAFLAMVTNPDYREHVKHRQAAVEDSRLI 130


>gb|EAJ84157.1| unknown [environmental sequence]
          Length = 138

 Score = 54.7 bits (130), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 10  LIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPMAELPKPN 67
           LIGP +EKWD   +    SA +F++   N DY   + HR  A+ DSRL+ MA L   N
Sbjct: 77  LIGPSEEKWDFCFIAEYPSAGAFVSMVKNPDYREAMKHRQLAVRDSRLIRMAPLSSGN 134


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.318    0.138    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 103,252,347
Number of extensions: 3073521
Number of successful extensions: 6267
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 6267
Number of HSP's successfully gapped: 3
Length of query: 67
Length of database: 757,237,578
Length adjustment: 38
Effective length of query: 29
Effective length of database: 654,063,816
Effective search space: 18967850664
Effective search space used: 18967850664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 120 (50.8 bits)