BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0531.0006.p (126 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_833823.1| Acetyltransferase [Bacillus cereus ATCC 14579] ... 130 8e-30 ref|NP_658144.1| Acetyltransf, Acetyltransferase (GNAT) family [... 129 2e-29 ref|NP_980467.1| acetyltransferase, GNAT family [Bacillus cereus... 126 2e-28 ref|NP_388458.1| similar to hypothetical proteins from B. subtil... 108 4e-23 ref|NP_349141.1| Predicted acetyltransferase [Clostridium acetob... 107 1e-22 >ref|NP_833823.1| Acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP11024.1| Acetyltransferase [Bacillus cereus ATCC 14579] Length = 160 Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 61/124 (49%), Positives = 83/124 (66%) Query: 2 HKLAELPGYCAVLDGKVHAAIYYCCRDGECEIVSLDSKTENIGAGSRLIERVVEEAARAG 61 H+L ELPG+ A+ D ++ I Y CEIVSLDS E G G++L++ V++ A Sbjct: 35 HQLEELPGFVALSDDRIIGIITYEVTGNICEIVSLDSFEERKGIGTKLVDCVLQVAEEER 94 Query: 62 CTRVWLITSNDNSKAIRFYQKRGFDLTAVHREAITEARKLKPSIPLTGYDGIPVRHEVEF 121 C +VWLIT+NDN A+RFYQKR F +T ++ A+ EARK+K IP GYD IP+ HE++ Sbjct: 95 CRQVWLITTNDNMNALRFYQKRNFVMTNLYVNAVEEARKIKKEIPRMGYDNIPILHEIQL 154 Query: 122 EYRL 125 EYRL Sbjct: 155 EYRL 158 >ref|NP_658144.1| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis A2012] ref|NP_846560.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] gb|AAP28046.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] Length = 160 Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 59/124 (47%), Positives = 84/124 (67%) Query: 2 HKLAELPGYCAVLDGKVHAAIYYCCRDGECEIVSLDSKTENIGAGSRLIERVVEEAARAG 61 H+L ELPG+ A+L+ ++ I Y CEIVSLDS E G G++L++ V++ A Sbjct: 35 HQLEELPGFVALLEDRIIGIITYEVIGNMCEIVSLDSFEERKGIGTKLVDCVLKVAEEEQ 94 Query: 62 CTRVWLITSNDNSKAIRFYQKRGFDLTAVHREAITEARKLKPSIPLTGYDGIPVRHEVEF 121 C ++WLIT+NDN A+RFYQKR F +T ++ A+ +ARK+K IP GYD IP+ HE++ Sbjct: 95 CRQIWLITTNDNMNALRFYQKRNFVMTHLYVNAVEKARKIKKEIPRIGYDNIPILHEIQL 154 Query: 122 EYRL 125 EYRL Sbjct: 155 EYRL 158 >ref|NP_980467.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] gb|AAS43075.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] Length = 159 Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/124 (47%), Positives = 81/124 (65%) Query: 2 HKLAELPGYCAVLDGKVHAAIYYCCRDGECEIVSLDSKTENIGAGSRLIERVVEEAARAG 61 H+L ELPG+ A+ + ++ I Y CEIVSLDS E G G++L++ V+ A Sbjct: 35 HQLEELPGFVALSEDRIIGIITYELIGNMCEIVSLDSFKERKGIGTKLVDCVLRVAEEEQ 94 Query: 62 CTRVWLITSNDNSKAIRFYQKRGFDLTAVHREAITEARKLKPSIPLTGYDGIPVRHEVEF 121 C +VWLIT+NDN A+RFYQKR F +T ++ A+ EARK+K IP GYD IP+ HE++ Sbjct: 95 CRQVWLITTNDNMNALRFYQKRNFLMTNLYVNAVEEARKIKKEIPRIGYDNIPILHEIQL 154 Query: 122 EYRL 125 EY L Sbjct: 155 EYSL 158 >ref|NP_388458.1| similar to hypothetical proteins from B. subtilis [Bacillus subtilis] sp|O05501|YDHI_BACSU Hypothetical protein ydhI pir||E69784 conserved hypothetical protein ydhI - Bacillus subtilis dbj|BAA19701.1| B. subtilis yxaR hypothetical protein; P46328 (512) [Bacillus subtilis] emb|CAB12396.1| ydhI [Bacillus subtilis subsp. subtilis str. 168] Length = 160 Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 1/122 (0%) Query: 6 ELPGYCAVLD-GKVHAAIYYCCRDGECEIVSLDSKTENIGAGSRLIERVVEEAARAGCTR 64 EL G+ AV + G++ I Y +CEI+SLDS EN G G+ L+++V E+A A C R Sbjct: 39 ELDGFAAVNESGEIIGCITYTIDGKDCEIISLDSMIENKGIGTALLQQVEEKAKHAHCQR 98 Query: 65 VWLITSNDNSKAIRFYQKRGFDLTAVHREAITEARKLKPSIPLTGYDGIPVRHEVEFEYR 124 + LIT+NDN AI FYQKRG+ AV A+ +AR+LKP IP +GI +R E+ F Sbjct: 99 IKLITTNDNVNAIAFYQKRGYQFAAVFPNAVEKARRLKPEIPEVAENGILIRDEILFSKV 158 Query: 125 LD 126 +D Sbjct: 159 ID 160 >ref|NP_349141.1| Predicted acetyltransferase [Clostridium acetobutylicum] pir||F97211 probable acetyltransferase [imported] - Clostridium acetobutylicum gb|AAK80481.1| Predicted acetyltransferase [Clostridium acetobutylicum] Length = 158 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/122 (43%), Positives = 74/122 (60%) Query: 1 MHKLAELPGYCAVLDGKVHAAIYYCCRDGECEIVSLDSKTENIGAGSRLIERVVEEAARA 60 M ++EL G + + Y E EIVSLDS E G G+ L+ R V+ A+ Sbjct: 33 MVNMSELSGLVMYEGKNILGLLTYKLCKNEMEIVSLDSLREKEGIGTALVNRAVKIASCL 92 Query: 61 GCTRVWLITSNDNSKAIRFYQKRGFDLTAVHREAITEARKLKPSIPLTGYDGIPVRHEVE 120 ++ LIT+NDN A+RFYQKRGFD+ ++ ++ ARKLKPSIP+ G IP++HE+E Sbjct: 93 ELNKIKLITTNDNINALRFYQKRGFDMAKLYLNSVDSARKLKPSIPIKGNFDIPIKHEIE 152 Query: 121 FE 122 FE Sbjct: 153 FE 154 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.138 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 186,590,221 Number of extensions: 6551938 Number of successful extensions: 19493 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 19504 Number of HSP's successfully gapped: 8 Length of query: 126 Length of database: 757,237,578 Length adjustment: 89 Effective length of query: 37 Effective length of database: 515,593,767 Effective search space: 19076969379 Effective search space used: 19076969379 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 120 (50.8 bits)