BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0530.0011.p
         (196 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_810377.1| putative acetyltransferase, (GNAT) family [Bact...    79   5e-14
ref|NP_268165.1| hypothetical protein L69304 [Lactococcus lactis...    53   4e-06
ref|ZP_00037227.1| COG0454: Histone acetyltransferase HPA2 and r...    53   5e-06

>ref|NP_810377.1| putative acetyltransferase, (GNAT) family [Bacteroides
           thetaiotaomicron VPI-5482]
 gb|AAO76571.1| putative acetyltransferase, (GNAT) family [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 152

 Score = 79.0 bits (193), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 21/162 (12%)

Query: 27  VQILSLREHPEWADECREFLLEHF-NEFTSLHPAEV----LASAEPFPQGYLMLKDNRVI 81
           + ++SLR+ P++ +    +    + NE T +         L +  P PQ YL++  + +I
Sbjct: 1   MNLVSLRDSPQYLERAIAYFQSKWGNENTKMVYDNCFRHSLNAENPIPQWYLLMNGDEII 60

Query: 82  GWTGLLEKEAVTGRVYGWEGTLAKEEVVSEDLSPWITPLLVHPDERGNLYGKMLLEHARK 141
           G  GL   +  +                  DL PW+  L +    RGN Y  +L+E A+K
Sbjct: 61  GCAGLTSNDFNS----------------RADLYPWLVALFIEEKYRGNHYANLLIEQAKK 104

Query: 142 EAGRLGFKLVYLTTGEIGYYEKYGFREVGLTTFTWGRPTKVY 183
           +  + GF  +YL+T    YYE+ GF  +G     WG  ++VY
Sbjct: 105 DTLKFGFSKLYLSTSHTSYYERLGFTYIGDCWHPWGESSRVY 146


>ref|NP_268165.1| hypothetical protein L69304 [Lactococcus lactis subsp. lactis]
 pir||H86875 hypothetical protein yuiD [imported] - Lactococcus lactis subsp.
           lactis (strain IL1403)
 gb|AAK06106.1| UNKNOWN PROTEIN [Lactococcus lactis subsp. lactis]
          Length = 152

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 23/162 (14%)

Query: 28  QILSLREHPEWADECREFLLEHFNEFTSLHPA------EVLASAEPFPQGYLMLKDNRVI 81
           +++ LRE P +  E   F  E +   T  +P         L S +  PQ YL++ + ++I
Sbjct: 3   ELIKLREQPSYLKEAIRFFQEKWGN-TDSNPVYDDCLKHSLESNKKIPQWYLIVDEGKII 61

Query: 82  GWTGLLEKEAVTGRVYGWEGTLAKEEVVSEDLSPWITPLLVHPDERGNLYGKMLLEHARK 141
              GL+  + ++                  DL PW+  L V    R      +L+E  ++
Sbjct: 62  AGCGLISNDFIS----------------RMDLYPWLCALYVEEKFRNQGLAGLLIEAVKE 105

Query: 142 EAGRLGFKLVYLTTGEIGYYEKYGFREVGLTTFTWGRPTKVY 183
           +        +YL T    +YE + F  +      WG  +++Y
Sbjct: 106 DCRTFDIDKLYLATDFADFYEHFDFHYLADGYHPWGEKSRIY 147


>ref|ZP_00037227.1| COG0454: Histone acetyltransferase HPA2 and related
           acetyltransferases [Enterococcus faecium]
          Length = 122

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 15/127 (11%)

Query: 62  LASAEPFPQGYLMLKDNRVIGWTGLLEKEAVTGRVYGWEGTLAKEEVVSEDLSPWITPLL 121
           +A+ E  PQ Y++L            EKE + G      G +  +     DL+P +  L 
Sbjct: 10  IANKESIPQWYVVLD-----------EKETIVGGA----GVIENDFHNRPDLTPNLCALF 54

Query: 122 VHPDERGNLYGKMLLEHARKEAGRLGFKLVYLTTGEIGYYEKYGFREVGLTTFTWGRPTK 181
           V P++R     K +L   RKE  +LG++ +YL T    +YE+Y +  + +     G   +
Sbjct: 55  VEPEKRKQGIAKRILAEIRKEMHQLGYEKLYLITDHTTFYERYEWTFLTMVKEESGTTAR 114

Query: 182 VYGHDTI 188
           +Y  DTI
Sbjct: 115 LYQSDTI 121


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.320    0.141    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 319,338,573
Number of extensions: 13401753
Number of successful extensions: 28247
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 28282
Number of HSP's successfully gapped: 3
Length of query: 196
Length of database: 757,237,578
Length adjustment: 119
Effective length of query: 77
Effective length of database: 434,140,797
Effective search space: 33428841369
Effective search space used: 33428841369
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 122 (51.6 bits)