BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0530.0009.p
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_00106186.1| COG3178: Predicted phosphotransferase related...    64   6e-09

>ref|ZP_00106186.1| COG3178: Predicted phosphotransferase related to Ser/Thr protein
           kinases [Nostoc punctiforme]
          Length = 397

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 28/282 (9%)

Query: 49  IKAETLTQVLSKILGTKI-ICADFQTKPLHGGTLGDV----QLVTGYAETADGGKLPYTI 103
           I   TLT V+  IL +K     ++ ++ +    + +V    Q +TG A      +L +++
Sbjct: 10  IDEATLTIVVCHILDSKTATLGEWHSEAIAHHIINNVTAGLQRITGIANNGSE-QLSWSV 68

Query: 104 VSK--------TQKKWERFSDP---DSWRREYDFYKSDFGALLSESFRWPECYHAEMNEE 152
           + K            +    DP   + W+RE   Y S     L+     P C+       
Sbjct: 69  ILKILHLQPENAGSIFNSSQDPTHWNYWQREALIYTSGMLDNLTGDLVAPRCF-GITEPS 127

Query: 153 ENETQIWMEYIDGISGLDLTGDMYERAAEELGRFQGKVYAEQP----AFLQNLTNLSKVE 208
            N   +W+E I G SG   T + +  AA  LG  QG     Q      +L    + + V 
Sbjct: 128 ANVVWLWLEDIQGSSGSTWTMERFGLAARHLGYLQGSYVMAQSLPYEPWLSRGWHRAWVS 187

Query: 209 YMKNFYLHYRSWKRVYDYIRSDDCEIPKHLCKMLIDIDESADEIFNRIEKLPIVLCHRDF 268
            + N  L       V+ +    +   P  +   ++D+      + + ++K P  LCH D 
Sbjct: 188 NIDNTALEAWREPAVWQHPLLKEIFSPD-IGDRVMDLWSDRHILLDAVDKAPHTLCHFDI 246

Query: 269 WVANLFY---SDG--KTILIDWDTAGWGYLGEDLASLIADEA 305
              NLF     DG  +T+LIDW   G+G LGED+ +L+ D  
Sbjct: 247 TPNNLFSRHNPDGNDQTVLIDWSFVGYGVLGEDIINLVLDSV 288


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.322    0.139    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 611,252,794
Number of extensions: 25949375
Number of successful extensions: 58410
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 58415
Number of HSP's successfully gapped: 2
Length of query: 388
Length of database: 757,237,578
Length adjustment: 127
Effective length of query: 261
Effective length of database: 412,420,005
Effective search space: 107641621305
Effective search space used: 107641621305
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)