BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0518.0009.p
         (202 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_00180578.1| hypothetical protein Mther148601 [Moorella th...    75   1e-12
ref|NP_348012.1| Cobalamin-5-phosphate synthase [Clostridium ace...    68   1e-10
ref|ZP_00017633.1| hypothetical protein [Chloroflexus aurantiacus]     68   1e-10
ref|ZP_00103786.1| COG0368: Cobalamin-5-phosphate synthase [Desu...    65   1e-09
gb|AAN87476.1| cobalamin 5'-phosphate-synthase [Heliobacillus mo...    63   3e-09

>ref|ZP_00180578.1| hypothetical protein Mther148601 [Moorella thermoacetica ATCC
           39073]
          Length = 298

 Score = 74.7 bits (182), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 9   AAFQFLSRFPVKGGGDFSRELLQRSVVYYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXIT 68
           AA QFL+R  +    D      Q S+VY+P                              
Sbjct: 47  AALQFLTRIRLSKR-DTGATSFQESIVYFPLVGLILGLILAGAGQILSSLVPVPARAGFI 105

Query: 69  LILWVWLTGGLHLDGWMDCADGLLSYRTRERMLEIMKDSRIGAMGV 114
           L L ++L+GGLHLDG++D  DGLLS R RER+LEIMKDSR+GA GV
Sbjct: 106 LFLGIFLSGGLHLDGFIDTMDGLLSGRERERVLEIMKDSRVGAHGV 151


>ref|NP_348012.1| Cobalamin-5-phosphate synthase [Clostridium acetobutylicum]
 pir||E97070 cobalamin-5-phosphate synthase [imported] - Clostridium
           acetobutylicum
 gb|AAK79352.1| Cobalamin-5-phosphate synthase [Clostridium acetobutylicum]
          Length = 252

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%)

Query: 12  QFLSRFPVKGGGDFSRELLQRSVVYYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLIL 71
           QFL+R P+K   D + E   +++   P                            + LI 
Sbjct: 12  QFLTRIPIKYESDITTEDFGKALALVPIVGLIIGGIMGVTYMLLVKVFFYKISAVLVLIE 71

Query: 72  WVWLTGGLHLDGWMDCADGLLSYRTRERMLEIMKDSRIGAMGV 114
           +++LTGG+HLDG  D  DG+ S R +ER+LEIM+DSR+G   V
Sbjct: 72  YIFLTGGIHLDGLGDTFDGVFSNRPKERILEIMRDSRVGTNAV 114


>ref|ZP_00017633.1| hypothetical protein [Chloroflexus aurantiacus]
          Length = 253

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 54/104 (51%)

Query: 10  AFQFLSRFPVKGGGDFSRELLQRSVVYYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXITL 69
           A +FL+  P+ G    S + + R++ ++P                            + +
Sbjct: 15  AIRFLTIIPLPGLSPMSEQSVVRAIPWFPAVGLVIGGVLVAVDALARPLWGDLTAAMLVV 74

Query: 70  ILWVWLTGGLHLDGWMDCADGLLSYRTRERMLEIMKDSRIGAMG 113
           + W  +TGGLHLDG  D  D ++S+R+RER LEIMKDSRIGAMG
Sbjct: 75  VGWGIITGGLHLDGLSDTFDAVMSWRSRERKLEIMKDSRIGAMG 118


>ref|ZP_00103786.1| COG0368: Cobalamin-5-phosphate synthase [Desulfitobacterium
           hafniense]
          Length = 214

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 50/104 (48%)

Query: 10  AFQFLSRFPVKGGGDFSRELLQRSVVYYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXITL 69
           A  FL+R P+      + E   +S  YYP                            + L
Sbjct: 70  ALTFLTRIPLPQPEQVTSEEFTQSQHYYPLVGLILGGALWLALTLLLPHYPPLVTAALLL 129

Query: 70  ILWVWLTGGLHLDGWMDCADGLLSYRTRERMLEIMKDSRIGAMG 113
            L + LTGG+HLDG MD  DGLLS RT ERMLEIMKDS +GA G
Sbjct: 130 ALELILTGGIHLDGLMDSMDGLLSARTPERMLEIMKDSHVGAFG 173


>gb|AAN87476.1| cobalamin 5'-phosphate-synthase [Heliobacillus mobilis]
          Length = 285

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%)

Query: 10  AFQFLSRFPVKGGGDFSRELLQRSVVYYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXITL 69
           A  F +R P     + + E   RS +Y P                            + L
Sbjct: 14  ALSFFTRLPTGDVSNGNDEDFGRSFIYLPFVGLTIGIVISLLTPLLQFLFPPAVFVPLLL 73

Query: 70  ILWVWLTGGLHLDGWMDCADGLLSYRTRERMLEIMKDSRIGAMGV 114
            + +++TGG+H+DG+MD  DG+ S R  ER+LEIM+DSR+GA  V
Sbjct: 74  AMQIYITGGIHMDGFMDTFDGVFSARKPERVLEIMRDSRVGAHAV 118


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.324    0.136    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 224,609,255
Number of extensions: 6379138
Number of successful extensions: 17633
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 17647
Number of HSP's successfully gapped: 41
Length of query: 202
Length of database: 757,237,578
Length adjustment: 120
Effective length of query: 82
Effective length of database: 431,425,698
Effective search space: 35376907236
Effective search space used: 35376907236
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 123 (52.0 bits)