BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0514.0015.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAI71073.1| unknown [environmental sequence] 130 2e-29 ref|NP_752689.1| Hypthetical protein [Escherichia coli CFT073] >... 121 9e-27 gb|AAQ87149.1| Hypothetical protein RNGR00124 [Rhizobium sp. NGR... 120 2e-26 gb|EAA51094.1| hypothetical protein MG08616.4 [Magnaporthe grise... 103 3e-21 gb|EAA69174.1| hypothetical protein FG01810.1 [Gibberella zeae P... 102 5e-21 >gb|EAI71073.1| unknown [environmental sequence] Length = 159 Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 28 ESLLPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAVRIS 87 E+ LP +HA +L LP+GDLLCVWF G+ EG DVS+ MSRL AG+ W+ ++S Sbjct: 29 EAYLPSPCVQNHAANLHALPDGDLLCVWFGGTQEGIPDVSVYMSRLRAGTGVWSEPEKLS 88 Query: 88 DDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKTWGK 147 +D SEQNP LF P+G LW+ YTAQ + Q T+ + R++S D G +WG Sbjct: 89 NDPTRSEQNPVLFTAPDGRLWLTYTAQLS---------GHQNTAIVRRRISSDGGMSWGP 139 Query: 148 AEVMFSREGSFCRQKIQIL 166 E +F R G+F RQ I +L Sbjct: 140 IETLFDRAGTFVRQPIVVL 158 >ref|NP_752689.1| Hypthetical protein [Escherichia coli CFT073] gb|AAN79232.1| Hypthetical protein [Escherichia coli CFT073] Length = 389 Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 9/153 (5%) Query: 26 LVESLLPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAVR 85 ++ ++LP +HA ++ LP+G L+CVWFAG+ EG +D+S+ SRL AG W+ AV+ Sbjct: 20 VLTAMLPSSCPQNHAANILPLPDGALMCVWFAGTQEGIADISVWGSRLPAGGMQWSDAVK 79 Query: 86 ISDDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKTW 145 +S D+ SEQNP LFL P+ LW+++TAQ + D T+ + + S D G+TW Sbjct: 80 LSHDDTRSEQNPVLFLAPDNVLWLLWTAQISGNQD---------TAIVRYRKSDDLGQTW 130 Query: 146 GKAEVMFSREGSFCRQKIQILSSGRWIFENWIC 178 G+ + + G+F RQ I +L +G W+ + C Sbjct: 131 GEIATLLDKPGTFIRQPITVLDNGNWLLPVFYC 163 >gb|AAQ87149.1| Hypothetical protein RNGR00124 [Rhizobium sp. NGR234] Length = 399 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 9/160 (5%) Query: 25 GLVESLLPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAV 84 G E+ LP +HA +L LP+G L CVWF G+ EG D+S+ MSRL G WT Sbjct: 27 GCHEAYLPSPCVQNHAANLAFLPDGTLTCVWFGGTMEGMGDISVYMSRLAPGGRRWTDPE 86 Query: 85 RISDDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKT 144 ++SDD SEQNP +F P+G +W+++T+Q + D + + R++S D GKT Sbjct: 87 KMSDDPAKSEQNPLIFAAPDGRIWLLFTSQTSGNQD---------GAVVKRRISEDGGKT 137 Query: 145 WGKAEVMFSREGSFCRQKIQILSSGRWIFENWICFNDDTR 184 +G EV+ G+F RQ I + ++G W+ + C + R Sbjct: 138 FGATEVLCDIPGTFVRQPIIVNAAGDWLLPVFRCIGEAGR 177 >gb|EAA51094.1| hypothetical protein MG08616.4 [Magnaporthe grisea 70-15] Length = 396 Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/141 (45%), Positives = 83/141 (58%), Gaps = 10/141 (7%) Query: 27 VESLLPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAVRI 86 E+ +P HA +L LP+G+LLC WF GS EG SD+ I +SRL G+ WT +++ Sbjct: 21 TEAYIPASTIQVHASNLLLLPSGELLCAWFGGSMEGISDIYIWLSRLAPGAKEWTSPLQV 80 Query: 87 SDDNGFSEQNPSLFL-HPNGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKTW 145 S D G SEQNP LFL +G LW +YTAQ E Q + R++S D GKTW Sbjct: 81 SKDPGRSEQNPVLFLDERSGNLWCIYTAQ---------EHGAQNKCLVRRRISSDLGKTW 131 Query: 146 GKAEVMFSREGSFCRQKIQIL 166 G+AE +FS G F RQ I +L Sbjct: 132 GEAEELFSDRGIFVRQPIVVL 152 >gb|EAA69174.1| hypothetical protein FG01810.1 [Gibberella zeae PH-1] Length = 380 Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 11/150 (7%) Query: 31 LPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAVRISDDN 90 +P SHA +L +LP+ +LC WF GS EG D+ I +SRL GS +W+ ++S D Sbjct: 10 IPSATVQSHASNLLQLPDKTVLCTWFGGSQEGLPDICIWLSRLEPGSTSWSTPQKVSSDE 69 Query: 91 GFSEQNPSLFLHP-NGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKTWGKAE 149 S QNP LF P NG+LW+++T+Q A D + I ++ S D GKTW +A Sbjct: 70 NRSCQNPVLFRAPHNGDLWLLHTSQDAGNQD---------GAYILKRTSSDEGKTWSEAS 120 Query: 150 -VMFSREGSFCRQKIQILSSGRWIFENWIC 178 ++ + G F RQ I + S G WI + C Sbjct: 121 RLLPNATGIFIRQPIVVNSEGAWILPVFYC 150 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.135 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 315,293,557 Number of extensions: 12999366 Number of successful extensions: 21700 Number of sequences better than 1.0e-05: 17 Number of HSP's gapped: 21694 Number of HSP's successfully gapped: 17 Length of query: 198 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 79 Effective length of database: 434,140,797 Effective search space: 34297122963 Effective search space used: 34297122963 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 123 (52.0 bits)