BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0513.0006.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_631811.1| putative oxidoreductase [Streptomyces coelicolo... 144 1e-33 ref|NP_823521.1| putative oxidoreductase [Streptomyces avermitil... 125 9e-28 gb|EAB91554.1| unknown [environmental sequence] 91 2e-17 gb|EAA63261.1| hypothetical protein AN3293.2 [Aspergillus nidula... 89 9e-17 gb|EAG92968.1| unknown [environmental sequence] 82 1e-14 >ref|NP_631811.1| putative oxidoreductase [Streptomyces coelicolor A3(2)] emb|CAC14507.1| putative oxidoreductase [Streptomyces coelicolor A3(2)] Length = 244 Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 131/227 (57%), Gaps = 14/227 (6%) Query: 1 MKTIAIVGAGAGLGMSIAKKFGQNGFRVALISRNEEKLNQLVIELEQLGIEAAPFQADIL 60 + T+AIVGAG LG +I ++F G VALI+R+ L + EL G+ A F AD+ Sbjct: 4 LSTLAIVGAGPQLGRAIGRRFAVEGVDVALIARSRTTLQAVADELSDTGVRAEVFPADVT 63 Query: 61 NKEQIEVAFAAIKEKYGFIDVLEYSPTPSINTV--TPTLD---VTEENALYQFQFNVLGA 115 ++ + A A +E+ G ID+LEYSP PS + P ++ VT ++ L Q +LG Sbjct: 64 DRPALHAALTAAEERLGPIDILEYSPAPSPADLRRAPLVEATKVTVDSVLAQLDLYLLGG 123 Query: 116 LSSVRQVLPEMLDKQSGALLFTTGGAAIHPV--PMMGNVGIAISGLRNYIFNLNSELADK 173 +++V+ VLP ML++ +G +L ++ GA PV P + NV IA G+RN+I NL++ L+ Sbjct: 124 VAAVQHVLPGMLERGTGTILVSS-GAGSGPVIAPHVANVQIATGGMRNWILNLHAALSGT 182 Query: 174 GVYAGHLSIGIWMQPNSGVQDK----IADIWYDMYTKRDRVEEFITE 216 GVYA H++I ++ G D IAD ++ ++T R E I + Sbjct: 183 GVYAAHVAIAAYI--GQGGHDSQPQTIADAYWRLHTGRTEAELVIQD 227 >ref|NP_823521.1| putative oxidoreductase [Streptomyces avermitilis MA-4680] dbj|BAC70056.1| putative oxidoreductase [Streptomyces avermitilis MA-4680] Length = 222 Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 2/215 (0%) Query: 1 MKTIAIVGAGAGLGMSIAKKFGQNGFRVALISRNEEKLNQLVIELEQLGIEAAPFQADIL 60 M TIAIVGAG GLG ++A++FG+ GF VAL+SR+ +++ L EL + G+ A F AD+ Sbjct: 1 MTTIAIVGAGPGLGAAVARRFGREGFDVALVSRDRGRVDALAAELAEEGVTARGFAADVR 60 Query: 61 NKEQIEVAFAAIKEKYGFIDVLEYSPTPSINTVTPTLDVTEENALYQFQFNVLGALSSVR 120 + + + A A G I+VL+YSP P + P L+ T + + +F++ G +++V+ Sbjct: 61 DPKALTAALDAATATLGPIEVLQYSPVPQREFMRPVLETTPADLVGPIEFSLYGPVAAVQ 120 Query: 121 QVLPEMLDKQSGALLFTTGGAAIHPVPMMGNVGIAISGLRNYIFNLNSELADKGVYAGHL 180 Q +P M G +LF GG A+ P P +A + Y L+ LA G++ L Sbjct: 121 QAVPGMRALGRGTVLFVNGGTAVVPHPDRAGTSVAFAAESAYGHLLHDTLAGDGIHVAQL 180 Query: 181 SIGIWMQPNSGVQDK--IADIWYDMYTKRDRVEEF 213 I + P +D +ADI + ++ R F Sbjct: 181 IIPGAIIPGHRRKDPAVLADILWGLHQDRHGYRHF 215 >gb|EAB91554.1| unknown [environmental sequence] Length = 241 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 1/177 (0%) Query: 6 IVGAGAGLGMSIAKKFGQNGFRVALISRNEEKLNQLVIELEQLGIEAAPFQADILNKEQI 65 I+G G GLG ++A KF GF +AL+SR+E+ + +E+ A F AD+ + + Sbjct: 8 IIGPGEGLGRALAAKFAAQGFDLALVSRSEKNCAHAIEAVEKKSGNARFFSADVTQPQTV 67 Query: 66 EVAFAAIKEKYGFIDVLEYSPTPSINTVTPTLDVTEENALYQFQFNVLGALSSVRQVLPE 125 E A A I ++ G I +L Y+ ++ P LD+T E +Q V+GA ++ + VLP Sbjct: 68 EAAVADIYQEMGEIRLLIYNVRGRFDSCMP-LDMTYEALERIYQEEVVGAFAAAKAVLPN 126 Query: 126 MLDKQSGALLFTTGGAAIHPVPMMGNVGIAISGLRNYIFNLNSELADKGVYAGHLSI 182 M++K G++ F++ AA+ I GLR +L A G++ H + Sbjct: 127 MIEKGQGSIFFSSATAALRGSARFSLYAIGKFGLRALSQSLAKAYAVDGIHIAHFRL 183 >gb|EAA63261.1| hypothetical protein AN3293.2 [Aspergillus nidulans FGSC A4] Length = 313 Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 12/184 (6%) Query: 4 IAIVGAGAGLGMSIAKKFGQNGFRVALISRNEEKLNQLVIEL-EQLGIEAAPFQ-ADILN 61 +A++G G G+G +++ F GF VALI+R E KL ++ + + +G A+ + AD + Sbjct: 60 LAVIGVGPGIGEAVSHHFASKGFVVALIARTESKLEKVQKTINDDVGTTASKYYVADARS 119 Query: 62 KEQIEVAFAAIKEKYGFIDVLEYSPTPSINTVTPTLDVTEENALYQFQFNVLGALSSVRQ 121 + ++ AFAAIK G +DVL Y+ T L+ + E + N+ GA + + Sbjct: 120 ESSLQSAFAAIKADLGPVDVLIYNAGSRRFTPRNILETSSEEFENFTRINLFGAFFATKC 179 Query: 122 VLPEMLDKQSGALLFTTGGAAIHPVPMMGNVGIAI-----SGLRNYIFNLNSELADKGVY 176 VLP+ML K SG ++FT +I GN G++ GLR+ + E G++ Sbjct: 180 VLPDMLAKSSGTIIFTGATGSIR-----GNAGVSSFSPGKFGLRSLSQIIAREFQSSGIH 234 Query: 177 AGHL 180 A HL Sbjct: 235 AAHL 238 >gb|EAG92968.1| unknown [environmental sequence] Length = 237 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Query: 2 KTIAIVGAGAGLGMSIAKKFGQNGFRVALISRNEEKLNQLVIELEQLGIEAAPFQADILN 61 K I G G G G ++ +KF + G+RVA+ISR +E+L L EL + F D+ + Sbjct: 8 KICLITGVGPGTGTALVRKFAREGYRVAMISRTKERLEALESEL----TDVKGFVCDVAD 63 Query: 62 KEQIEVAFAAIKEKYGFIDVLEYSPTPSINTVTPTLDVTEENALYQFQFNVLGALSSVRQ 121 ++E F I+ + G VL ++ + +D+ E L FQ N + L R Sbjct: 64 SVELEPTFREIETQLGQPQVLVHNAVGAERGT--YMDIDPEKFLKAFQVNTMALLHLARL 121 Query: 122 VLPEMLDKQSGALLFTTGGAAIHPVPMMGNVGIAISGLRNYIFNLNSELADKGVYAGHLS 181 V P M+++Q GA++ T +A P + R + ++ E KGV+A +++ Sbjct: 122 VTPSMIERQFGAIICTGNTSAYRGKPRFAGFAPTKAAQRILLESIAREAGPKGVHAAYVA 181 Query: 182 I 182 I Sbjct: 182 I 182 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 319,840,290 Number of extensions: 13036362 Number of successful extensions: 48327 Number of sequences better than 1.0e-05: 1328 Number of HSP's gapped: 49485 Number of HSP's successfully gapped: 1330 Length of query: 219 Length of database: 757,237,578 Length adjustment: 121 Effective length of query: 98 Effective length of database: 428,710,599 Effective search space: 42013638702 Effective search space used: 42013638702 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 123 (52.0 bits)