BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0509.0017.p (333 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00063710.1| COG0667: Predicted oxidoreductases (related t... 360 3e-98 ref|NP_720832.1| putative oxidoreductase [Streptococcus mutans U... 280 2e-74 ref|ZP_00107649.1| COG0667: Predicted oxidoreductases (related t... 200 4e-50 ref|ZP_00159954.1| hypothetical protein Avar324901 [Anabaena var... 199 1e-49 ref|ZP_00163843.1| hypothetical protein Selo241101 [Synechococcu... 199 1e-49 >ref|ZP_00063710.1| COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 324 Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 171/317 (53%), Positives = 226/317 (71%) Query: 11 RPLGQSTLSVSPLGLGCWQFSRGKGIVGKYWGNLEDADILEIVRVSLEGGMNWVDTAEIY 70 R LGQ+ L +SPLGLG WQ+S WGN E + EI++ SL+ GMNW+DTAEIY Sbjct: 5 RQLGQTDLYLSPLGLGTWQYSTKNSSGTSMWGNTETETVYEIIKHSLQNGMNWIDTAEIY 64 Query: 71 GGGKSEEALAYVLDQLKREGRPYATPLIATKWWPLFRTANSITSTIDERIRCLGGRDIDL 130 G G SE + V +L+RE P IA+KW+PL R+A+SIT TID+R+ L IDL Sbjct: 65 GNGTSETFIGEVTQRLQREEALATNPFIASKWFPLARSASSITKTIDDRLEYLQILTIDL 124 Query: 131 YQIHQPFSLSTIASEMKAMAGLVQAGKIRNVGVSNYSAKQMTEAHHLLRQYGLNLVSNQV 190 YQIHQP S S++ +++AM L + K++ +GVSN+SAKQM +AHHLL++YG+ L SNQV Sbjct: 125 YQIHQPTSRSSLRKQIEAMVSLAEQHKVKQIGVSNFSAKQMVKAHHLLQEYGMTLASNQV 184 Query: 191 KYNLLDRKIDRNGTMEAAKALGISIIAYSPLQQGILTGRFHKDPAQIRAVSRVRRIQSGL 250 KYNLL R ++NGT+EAAK LGI+IIAYSPLQQG+LTGRFH+ P + VSR R++QS L Sbjct: 185 KYNLLHRSPEKNGTLEAAKELGITIIAYSPLQQGLLTGRFHEQPESLSKVSRFRKLQSNL 244 Query: 251 DDKSLARSKPLIDSLTVLADKYGATPGQIALNWLIHYNGETVVAIPGASKVRHAQENIGA 310 K+L R++PL L L+ YG T QI+LNWLI+ G+TV+AIPGASK++ AQ+N+ A Sbjct: 245 TTKTLQRTEPLYQELKRLSLNYGMTISQISLNWLINAQGDTVLAIPGASKIQQAQDNVEA 304 Query: 311 LGFRLEKDELEHLNDVS 327 L F L ++E LN +S Sbjct: 305 LNFDLSNSDIERLNRIS 321 >ref|NP_720832.1| putative oxidoreductase [Streptococcus mutans UA159] gb|AAN58138.1| putative oxidoreductase [Streptococcus mutans UA159] Length = 284 Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 136/276 (49%), Positives = 189/276 (68%) Query: 49 ILEIVRVSLEGGMNWVDTAEIYGGGKSEEALAYVLDQLKREGRPYATPLIATKWWPLFRT 108 + +I++ SL+G +NW+DTAE YG G SE+ + +L L +EG T IA KW+PL R+ Sbjct: 2 VYDIIKASLQGRINWLDTAEYYGHGNSEKFIGSILKLLAKEGSLTETIYIADKWFPLLRS 61 Query: 109 ANSITSTIDERIRCLGGRDIDLYQIHQPFSLSTIASEMKAMAGLVQAGKIRNVGVSNYSA 168 A +I T R+ L IDLYQIH P S+S++ + + +A L + G I+ +GVSN+SA Sbjct: 62 AKTIAQTFSGRLSNLQRPFIDLYQIHHPTSISSLKKQAEELANLQEKGLIKAIGVSNFSA 121 Query: 169 KQMTEAHHLLRQYGLNLVSNQVKYNLLDRKIDRNGTMEAAKALGISIIAYSPLQQGILTG 228 QM + LL+ +GL L SNQVKYNLL RK +RNG ++ AK GIS+IAYSPLQQG+LTG Sbjct: 122 HQMVKMDELLKSFGLRLDSNQVKYNLLHRKPERNGVLDVAKERGISLIAYSPLQQGVLTG 181 Query: 229 RFHKDPAQIRAVSRVRRIQSGLDDKSLARSKPLIDSLTVLADKYGATPGQIALNWLIHYN 288 RFH + I+ +S +RR+ S L +SL +++PLI+ L LADKY TP QI+LNWLIH + Sbjct: 182 RFHAESDSIKKISMLRRLNSELSSRSLKKTQPLIELLQKLADKYHKTPAQISLNWLIHAH 241 Query: 289 GETVVAIPGASKVRHAQENIGALGFRLEKDELEHLN 324 T+ AIPGAS ++ AQ N+ A F+L K +L+ L+ Sbjct: 242 VSTIFAIPGASSLKQAQSNLEAQNFKLTKTDLQKLS 277 >ref|ZP_00107649.1| COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Nostoc punctiforme] Length = 315 Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 15/318 (4%) Query: 13 LGQSTLSVSPLGLGCWQFSRGKGIVGKYWGNLEDADILEIVRVSLEGGMNWVDTAEIYGG 72 LGQ+ V+PL +G W + G + Y + E +LE G+ + DTAEIYG Sbjct: 6 LGQNGPVVTPLCIGTWAW--GDKLFWNYGDRYGPEQLQEAFTAALEAGITFFDTAEIYGM 63 Query: 73 GKSEEALAYVLDQLKREGRPYATPLIATKWWPL-FR-TANSITSTIDERIRCLGGRDIDL 130 GKSEE L L ++ + IATK+ P+ +R TA S++ + ++ L I L Sbjct: 64 GKSEEFLGQFLQHTQQPVQ------IATKFGPVPWRFTAQSVSDALTASLKRLQLERIAL 117 Query: 131 YQIHQPFSLS-TIASEMKAMAGLVQAGKIRNVGVSNYSAKQMTEAHHLLRQYGLNLVSNQ 189 YQ+H PF+ + + M A+A V+ G+I VGVSNYSA+QM +AH +L G+ L NQ Sbjct: 118 YQVHWPFAFFLSQQTLMNALADEVKRGRIAAVGVSNYSAEQMRDAHQILADRGVPLAVNQ 177 Query: 190 VKYNLLDRKIDRNGTMEAAKALGISIIAYSPLQQGILTGRFHKDPAQIRAVSRVRRIQSG 249 V+Y+LL R+I+ G + A+ LG++I+AYSPL QG+LTG++ D A+ + R+I S Sbjct: 178 VRYSLLSRQIESKGILATARELGVTILAYSPLAQGLLTGKYSIDSAE--TPTGARKIDSR 235 Query: 250 LDDKSLARSKPLIDSLTVLADKYGATPGQIALNWLIHYNGETVVAIPGASKVRHAQENIG 309 + L + P+I L +KY TP Q+ALNWLI V+ I G ++N G Sbjct: 236 FKKEGLQKISPVISLLRNFGEKYDRTPAQVALNWLIAQG--NVIPIAGVKTAEQVRQNAG 293 Query: 310 ALGFRLEKDELEHLNDVS 327 ALG+RL DE+ L VS Sbjct: 294 ALGWRLSDDEIGELELVS 311 >ref|ZP_00159954.1| hypothetical protein Avar324901 [Anabaena variabilis ATCC 29413] Length = 315 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 183/318 (57%), Gaps = 15/318 (4%) Query: 13 LGQSTLSVSPLGLGCWQFSRGKGIVGKYWGNLEDADILEIVRVSLEGGMNWVDTAEIYGG 72 LG++ +V+PL +G W + G + Y + E +LE G+ + DTAE+YG Sbjct: 6 LGKNGPTVTPLCIGTWAW--GDKLFWNYGNGYGSEQLQEAFTTALEAGVTFFDTAEVYGL 63 Query: 73 GKSEEALAYVLDQLKREGRPYATPLIATKWWPL-FR-TANSITSTIDERIRCLGGRDIDL 130 G SEE L + Q+K+ + IATK+ PL +R + S++ I + ++ L +DL Sbjct: 64 GLSEELLGQFVKQVKKPVQ------IATKFGPLPWRFSGQSVSDAITDSLKRLQLERVDL 117 Query: 131 YQIHQPFS-LSTIASEMKAMAGLVQAGKIRNVGVSNYSAKQMTEAHHLLRQYGLNLVSNQ 189 YQ+H PF+ L + + M +A V+ G+I VGVSNYSA QM +AH +L G+ L NQ Sbjct: 118 YQVHWPFTFLLSQETLMNTLADEVKRGRIAAVGVSNYSASQMRQAHQILASRGVPLAVNQ 177 Query: 190 VKYNLLDRKIDRNGTMEAAKALGISIIAYSPLQQGILTGRFHKDPAQIRAVSRVRRIQSG 249 V+Y+LL R+I+ G + A+ L ++I+AYSPL QG+LTG++ + A++ + R I Sbjct: 178 VRYSLLSRQIETEGIVATARELDVTILAYSPLAQGLLTGKYSAESAEVP--TGARSIDPR 235 Query: 250 LDDKSLARSKPLIDSLTVLADKYGATPGQIALNWLIHYNGETVVAIPGASKVRHAQENIG 309 + L + P+I L L +KY TP Q+ALNWLI V+ I G + ++N G Sbjct: 236 FKKEGLQKIAPVISLLRSLGEKYDRTPAQVALNWLIAQG--NVIPIAGVKTAQQVRQNAG 293 Query: 310 ALGFRLEKDELEHLNDVS 327 ALG+RL +E++ L VS Sbjct: 294 ALGWRLNDEEVQELEKVS 311 >ref|ZP_00163843.1| hypothetical protein Selo241101 [Synechococcus elongatus PCC 7942] Length = 325 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 116/318 (36%), Positives = 191/318 (60%), Gaps = 15/318 (4%) Query: 13 LGQSTLSVSPLGLGCWQFSRGKGIVGKYWGNLEDADILEIVRVSLEGGMNWVDTAEIYGG 72 LG + +VS LG+G W + G + Y + ++A + ++ G+++ DTAEIYG Sbjct: 9 LGPNGPTVSALGIGTWAW--GDSLYWTYGQDYDEAQLQTTFATAIAAGVSFFDTAEIYGL 66 Query: 73 GKSEEALAYVLDQLKREGRPYATPLIATKWWPL-FRT-ANSITSTIDERIRCLGGRDIDL 130 G+SE L L Q + + IATK++P+ +R + ++ +D+ + L + I+L Sbjct: 67 GESERILGRCLQQGDQPAQ------IATKYFPIPWRFGSKAVQKALDQSLERLQRQSIEL 120 Query: 131 YQIHQPFSLSTIASE-MKAMAGLVQAGKIRNVGVSNYSAKQMTEAHHLLRQYGLNLVSNQ 189 YQ+H P + ++ +K +A + G+I+ +GVSNY+A+Q+ +AH LL + G+ L NQ Sbjct: 121 YQVHWPPAFLLGQTKILKTLAAAYKRGQIQAIGVSNYNARQLRQAHALLAEQGVPLAVNQ 180 Query: 190 VKYNLLDRKIDRNGTMEAAKALGISIIAYSPLQQGILTGRFHKDPAQIRAVSRVRRIQSG 249 V+Y+LL+R+I+ NG++ AA+ LG++I+AY PL QG+LTG++ D A R R+I Sbjct: 181 VQYSLLERRIETNGSLAAARELGVTILAYCPLAQGLLTGKYRPD-ADSRPTG-ARKINPQ 238 Query: 250 LDDKSLARSKPLIDSLTVLADKYGATPGQIALNWLIHYNGETVVAIPGASKVRHAQENIG 309 ++L + +PL+D L L D+Y T Q+ALNWLI V+ IPGA AQ+N G Sbjct: 239 FRSQALEKLQPLLDQLAALGDRYDRTIPQVALNWLIAQG--NVIPIPGAKSPAQAQDNAG 296 Query: 310 ALGFRLEKDELEHLNDVS 327 ALG++L +++ L +S Sbjct: 297 ALGWQLSPEDVASLAQLS 314 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 481,477,512 Number of extensions: 19827284 Number of successful extensions: 51899 Number of sequences better than 1.0e-05: 1303 Number of HSP's gapped: 49958 Number of HSP's successfully gapped: 1308 Length of query: 333 Length of database: 757,237,578 Length adjustment: 126 Effective length of query: 207 Effective length of database: 415,135,104 Effective search space: 85932966528 Effective search space used: 85932966528 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)