BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0509.0013.p (1052 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_464751.1| similar to transporter, (to B. subtilis YdgH pr... 786 0.0 ref|NP_470526.1| similar to transporter, (to B. subtilis YdgH pr... 780 0.0 ref|NP_979293.1| membrane protein, MmpL family, putative [Bacill... 536 e-151 ref|NP_149265.1| Membrane protein [Clostridium acetobutylicum] >... 489 e-136 ref|ZP_00183302.1| hypothetical protein Exigu129601 [Exiguobacte... 408 e-112 >ref|NP_464751.1| similar to transporter, (to B. subtilis YdgH protein) [Listeria monocytogenes EGD-e] pir||AB1228 transporter, (to B. subtilis YdgH protein) homolog lmo1226 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC99304.1| lmo1226 [Listeria monocytogenes] Length = 1066 Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/1059 (40%), Positives = 605/1059 (57%), Gaps = 29/1059 (2%) Query: 1 LKTVLKARWAIIAVWLSAAVVLFMTAPGMSDLVREKGQISVPDGYTSTRAAEIMKEV-AD 59 +K ++K RWAI+A WL+AAVVL AP M+DLVREKG++ +PDGY S+ A E+ K+ D Sbjct: 1 MKWIMKLRWAILAFWLAAAVVLMFIAPPMADLVREKGELKLPDGYPSSLATEMQKKHNPD 60 Query: 60 AKGGETLHQVALVFNKPDGLAAEDTESIKQGVEKLAAEKEALKIDSITDPFSQAELKDTL 119 KG + V+ L + I++ ++ + +K+ L + ++ F+Q ELKD Sbjct: 61 DKGSAYIA----VYTADHKLTGTELNDIQKSLDSIEKDKDELHVTNVLSSFNQPELKDKF 116 Query: 120 IAKDGKTIMVALMVNGGEEAVKQLPDQVDKLLSGVSADHYLTSEGLITEDTIVSSEAGLK 179 +AKDGKT++ +L V+ + +VK + + +DK + D YLT LI ED + SE GL Sbjct: 117 LAKDGKTMVASLTVDDTDASVKSIRNALDKKMDVKGVDTYLTGNKLIQEDVVQGSEDGLH 176 Query: 180 KSEYITXXXXXXXXXXXXRSFVAPFVPLLTVGLSYIVSQSIVAFLVDRFDFPLSTFTQIF 239 K+E IT RS VAPF+PL+TVG+SY+V+QS VAFL+D F+FP+ST+TQIF Sbjct: 177 KTEGITVVFILVVLFLVFRSAVAPFIPLITVGISYLVAQSTVAFLIDIFNFPVSTYTQIF 236 Query: 240 MVAVMFGIGTDYCILLISRFKEELATAEDTRSAIISTYRKAGGTVFYSGLAVFVGFLAIG 299 MV +MFGIGTDYCILL+SRFKEE+ + R A+ +TYR AG TV YSG+AV V F ++ Sbjct: 237 MVCIMFGIGTDYCILLMSRFKEEMGAGLNPREAVHATYRTAGKTVIYSGVAVLVAFTSLY 296 Query: 300 LSKFMLYRSAVAVAVGIAVMLLALVTVVPFFMAVLGKKLFWPSSSKLEHSESGIWGAAGS 359 +F LYRSAVAV VGI V+L AL T+VPFFM+ LG LFWP + + H E+ IWGAAG Sbjct: 297 FVQFDLYRSAVAVGVGIVVLLAALYTLVPFFMSTLGTHLFWPLNKNISHKENKIWGAAGK 356 Query: 360 FSLKRPWXXXXXXXXXXXXXXXTYSGKLSFNSMDEIGPGYASVKGFNIISDSFGPGESMP 419 F+ RPW ++G SFNS+DEI Y S KGF I+SDSFG G+ P Sbjct: 357 FTFARPWIALLIVAAITLPPILLHTGTESFNSLDEISDKYPSKKGFEIVSDSFGAGQVAP 416 Query: 420 GKIVIKNDDRMDTSEYMGLAEKISRELEKVDGVKAVRSMSRPTGEQINDFLIPTQVAALT 479 +I I+NDD M T++Y+ EKIS +L + G+ V S SRP G++++D I Q + Sbjct: 417 TQIFIENDDNMRTTDYIAQIEKISDDLSHLKGIDMVMSASRPAGKRVDDIYIKNQAGQVN 476 Query: 480 DGLSQSNEGLTKIQSGLEEASKQLKGNEPKLNEAVSGSAKLTEGTAELKKGIDALGDGLS 539 DG+ Q+ +G+ +++ GL+ AS +LK +EP L++AV+G L +GT ++GI+ L L+ Sbjct: 477 DGVGQATDGVGEVKKGLDSASSELKKSEPALDKAVAGVGDLQKGTVATQEGINQLQTALA 536 Query: 540 RIERGIKSGSSGAGEIKXXXXXXXXXXXXXXXXXXXXXXGYQKIXXXXXXXX------XX 593 +I++GI+SG++GAG++K GY +I Sbjct: 537 QIQKGIESGATGAGDLKQGVAEAKSQLATLQNGEAQIQAGYAEIQKNLQNVADQLKGFEN 596 Query: 594 XXXXXXXXXXVASALAGLDASFTGLENAHPDLLQDVNYQT----IKGTVTQSXXXXXXXX 649 + + ASF AHP++ D +Q I+G T Sbjct: 597 PSSQAIDTSKLEEQFKKIGASFQAFAAAHPEVRNDPRFQKLAADIQGLETAGNELKTSAG 656 Query: 650 XXXXQISGQLKXXXXXXXXXXXXXXXXXXXXXXXXXXLDKLVAGIG-------QLQSGLN 702 + ++K L G+G QL+ GLN Sbjct: 657 QQMAALQAKMKELNQGIQQLATAMNQLNEQSKQISDGLSAFSTGLGQIETGLDQLEKGLN 716 Query: 703 QAAAGQGQIVDKIPSISSXXXXXXXXXXXXXXXXXXXTGQIGKLTDGLSDSADGLKQITG 762 QAA GQGQ+V K+P +S+ +GQ+G+LTDGL+ ADGL ++ Sbjct: 717 QAAVGQGQVVSKMPEVSNALTQIAAGQGALKDGFAGISGQMGQLTDGLTSGADGLGKVES 776 Query: 763 GLNSAQ---DYLKQIQDAKDDELSGFLVPEEALKEGGIQQVFDNYLSSDRKVMTLDVVYA 819 GLN+A D ++ A SG VP+ LK Q+V D Y+SSD K+ T++V+ Sbjct: 777 GLNTANGLIDDWSKVPYAS----SGIYVPDALLKNADFQKVLDQYISSDGKLATINVILT 832 Query: 820 ANPYSAKAIDSMGDIQAAVDRAVKGTKLENAETAISGVSSTYSDLQKISNEDYTRTXXXX 879 NPYS +A+DS+ DI + ++KGTKLENA+ I G++S D + +S DY Sbjct: 833 KNPYSNEAMDSIDDINDQLAASMKGTKLENAKIGIGGMTSANYDTRDMSTADYHLVLVIV 892 Query: 880 XXXXXXXXXXXXRSIIMPLYLIVSLLITYFTALGVTEAIFVHVLDYSGITWTTPFFSFVM 939 RS++MP+YLI SL++TYF ALG E IF+ +L YSG+TW TPFF FV+ Sbjct: 893 LASVFVTLVIVLRSLVMPIYLIASLVLTYFAALGFAEIIFMRILGYSGLTWATPFFGFVV 952 Query: 940 LIALGVDYSIFLMDRFNENKTWDVREAILHAMRNMGTVILSAVVILGGTFASMYPSGVLS 999 L+ALG+DYSIFLM RFNE VR+ ++ AM+NMG VI SAV+ILGGTFA+M P+GVLS Sbjct: 953 LVALGIDYSIFLMSRFNEYNGLSVRDRMIKAMKNMGGVIFSAVIILGGTFAAMMPAGVLS 1012 Query: 1000 MMQIATVVLSGXXXXXXXXXXXXXXXXXXXXGRANWWPF 1038 +++IATVVL G GR NWWPF Sbjct: 1013 LLEIATVVLIGLVLYAVVILPLFVPVMVKLFGRGNWWPF 1051 >ref|NP_470526.1| similar to transporter, (to B. subtilis YdgH protein) [Listeria innocua] pir||AD1581 transporter, (to B. subtilis YdgH protein) homolog lin1189 [imported] - Listeria innocua (strain Clip11262) emb|CAC96420.1| lin1189 [Listeria innocua] Length = 1066 Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/1059 (40%), Positives = 604/1059 (57%), Gaps = 29/1059 (2%) Query: 1 LKTVLKARWAIIAVWLSAAVVLFMTAPGMSDLVREKGQISVPDGYTSTRAAEIMKEV-AD 59 +K ++K RWAI+A WL+AAVVL AP M+DLVREKG++ +PDGY S+ A E+ K+ D Sbjct: 1 MKWIMKLRWAILAFWLAAAVVLMFIAPPMADLVREKGELKLPDGYPSSLATEMQKKHNPD 60 Query: 60 AKGGETLHQVALVFNKPDGLAAEDTESIKQGVEKLAAEKEALKIDSITDPFSQAELKDTL 119 KG + V+ L + +IK+ ++ + K+ L + ++ F+Q ELKD Sbjct: 61 DKGSAYIA----VYTADHKLTGTELNNIKKSLDSIDKNKDELHVTNVVSSFNQPELKDKF 116 Query: 120 IAKDGKTIMVALMVNGGEEAVKQLPDQVDKLLSGVSADHYLTSEGLITEDTIVSSEAGLK 179 ++KDGKT++ +L V+ + +VK + + +DK + D YLT LI ED + SE GL Sbjct: 117 LSKDGKTMVASLTVDDTDASVKSIRNALDKKMDVKGVDTYLTGNKLIQEDVVQGSEDGLH 176 Query: 180 KSEYITXXXXXXXXXXXXRSFVAPFVPLLTVGLSYIVSQSIVAFLVDRFDFPLSTFTQIF 239 K+E IT RS VAPF+PLLTVG+SY+V+QS VAFL+D F+FP+ST+TQIF Sbjct: 177 KTEGITVVFILVVLFLVFRSAVAPFIPLLTVGISYLVAQSTVAFLIDIFNFPVSTYTQIF 236 Query: 240 MVAVMFGIGTDYCILLISRFKEELATAEDTRSAIISTYRKAGGTVFYSGLAVFVGFLAIG 299 MV +MFGIGTDYCILL+SRFKEE+ D R ++ +TYR AG TV YSG+AV V F ++ Sbjct: 237 MVCIMFGIGTDYCILLMSRFKEEMGAGLDPRESVHATYRTAGKTVIYSGVAVLVAFTSLY 296 Query: 300 LSKFMLYRSAVAVAVGIAVMLLALVTVVPFFMAVLGKKLFWPSSSKLEHSESGIWGAAGS 359 +F LYRSAVAV VGI V+L AL T+VPFFM+ LG LFWP + + H E+ +WGAAG Sbjct: 297 FVQFDLYRSAVAVGVGIVVLLAALYTLVPFFMSTLGTHLFWPLNKNISHKENKVWGAAGK 356 Query: 360 FSLKRPWXXXXXXXXXXXXXXXTYSGKLSFNSMDEIGPGYASVKGFNIISDSFGPGESMP 419 F+ RPW ++G SFNS+DEI Y S KGF I+SDSFG G+ P Sbjct: 357 FTFARPWIALLIVAAITLPPILLHTGTESFNSLDEISDKYPSKKGFEIVSDSFGAGQVAP 416 Query: 420 GKIVIKNDDRMDTSEYMGLAEKISRELEKVDGVKAVRSMSRPTGEQINDFLIPTQVAALT 479 ++ I+NDD M T+EY+ EKIS +L + G+ V S SRP G++++D I Q + Sbjct: 417 TQVFIENDDNMRTTEYIAQIEKISDDLSHLKGIDMVMSASRPAGKRVDDIYIKNQAGQVN 476 Query: 480 DGLSQSNEGLTKIQSGLEEASKQLKGNEPKLNEAVSGSAKLTEGTAELKKGIDALGDGLS 539 DG+ Q+ +G+ +++ GL+ AS +LK +EP L++AV+G L +GT ++GI+ L L+ Sbjct: 477 DGVGQATDGVGEVKKGLDSASSELKKSEPALDKAVAGVGDLQKGTVATEQGINQLQAALA 536 Query: 540 RIERGIKSGSSGAGEIKXXXXXXXXXXXXXXXXXXXXXXGYQKIXXXXXXXXXXX----- 594 +I+ GI+SG++GAG++K GY +I Sbjct: 537 QIQIGIESGATGAGDLKQGVAEAKSQLASLQNGEAQIQAGYAEIQKNLQNVAEQLKGFGN 596 Query: 595 -XXXXXXXXXVASALAGLDASFTGLENAHPDLLQDVNYQT----IKGTVTQSXXXXXXXX 649 + + + SF AHP++ D +Q I+G T Sbjct: 597 PNSPAIDTSKLEAQFKKIGESFQTFAAAHPEVRNDPKFQKLAADIQGLQTAGNELKTTAG 656 Query: 650 XXXXQISGQLKXXXXXXXXXXXXXXXXXXXXXXXXXXLDKLVAGIG-------QLQSGLN 702 + ++K L G+G QL++GLN Sbjct: 657 QQMAALQAKMKELNQGIQQLATAMNQLNEQSKQISDGLSAFGTGLGQIETGLDQLENGLN 716 Query: 703 QAAAGQGQIVDKIPSISSXXXXXXXXXXXXXXXXXXXTGQIGKLTDGLSDSADGLKQITG 762 QAA GQGQ+V K+P IS+ +GQ+G+LT+GL+ ADGL ++ Sbjct: 717 QAADGQGQVVSKMPEISNALSQIAAGQGALKEGFAGISGQMGELTNGLTSGADGLGKVES 776 Query: 763 GLNSAQ---DYLKQIQDAKDDELSGFLVPEEALKEGGIQQVFDNYLSSDRKVMTLDVVYA 819 GLN+A D ++ A SG VP+ LK Q+V D Y+SSD K+ T++V+ Sbjct: 777 GLNTANGLIDDWSKVPYAS----SGIYVPDALLKNADFQKVLDQYISSDGKLATINVILT 832 Query: 820 ANPYSAKAIDSMGDIQAAVDRAVKGTKLENAETAISGVSSTYSDLQKISNEDYTRTXXXX 879 NPYS A+DS+ DI + ++KGTKLENA+ I G++S D + +S DY Sbjct: 833 KNPYSNGAMDSIDDINEQLAASMKGTKLENAKIGIGGMTSANYDTRDMSTADYHLVLVIV 892 Query: 880 XXXXXXXXXXXXRSIIMPLYLIVSLLITYFTALGVTEAIFVHVLDYSGITWTTPFFSFVM 939 RS++MP+YLI SL++TYF ALG E IF+ +L YSG+TW TPFF FV+ Sbjct: 893 LASVFVTLVIVLRSLVMPIYLIASLVLTYFAALGFAEIIFMRILGYSGLTWATPFFGFVV 952 Query: 940 LIALGVDYSIFLMDRFNENKTWDVREAILHAMRNMGTVILSAVVILGGTFASMYPSGVLS 999 L+ALG+DYSIFLM RFNE VR+ ++ AM+NMG VI SAV+ILGGTFA+M P+GVLS Sbjct: 953 LVALGIDYSIFLMSRFNEYNGLSVRDRMIKAMKNMGGVIFSAVIILGGTFAAMMPAGVLS 1012 Query: 1000 MMQIATVVLSGXXXXXXXXXXXXXXXXXXXXGRANWWPF 1038 +++IATVVL G GR NWWPF Sbjct: 1013 LLEIATVVLIGLVLYAIVILPLFVPVMVKLFGRGNWWPF 1051 >ref|NP_979293.1| membrane protein, MmpL family, putative [Bacillus cereus ATCC 10987] gb|AAS41901.1| membrane protein, MmpL family, putative [Bacillus cereus ATCC 10987] Length = 1038 Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust. Identities = 326/996 (32%), Positives = 523/996 (52%), Gaps = 10/996 (1%) Query: 14 VWLSAAVVLFMTAPGMSDLVREKGQISVPDGYTSTRAAEIMKEVADAKGGETLHQVALVF 73 +W+ + + +T P M LV+EKG I++P+ S+ A +++KE+ K G +++ VF Sbjct: 14 LWIVITITMIVTVPNMDKLVKEKGHITIPNTEQSSIADKMIKEMN--KDGTEKYEIIAVF 71 Query: 74 NK--PDGLAAEDTESIKQGVEKLAAEKEALKIDSITDPFSQAELKDTLIAKDGKTIMVAL 131 N L E E I + + L EKE L I I +L+ L++KD TI+ + Sbjct: 72 NSGSKTALTTEQKEEITKTINVLQNEKEQLGIKEIVSHLDNKDLEKQLVSKDNTTILTQV 131 Query: 132 MVNGGEEAVKQLPDQVDKLLSGVSADHYLTSEGLITEDTIVSSEAGLKKSEYITXXXXXX 191 ++ + ++ + + + YLT LI D + SS+ G+KK+E I+ Sbjct: 132 SIDKKHGEISKVTNNLHNKVKTKEVTTYLTGSDLIAGDFLTSSQEGVKKTEVISIIFILV 191 Query: 192 XXXXXXRSFVAPFVPLLTVGLSYIVSQSIVAFLVDRFDFPLSTFTQIFMVAVMFGIGTDY 251 RS + P V LLTVG+SY+VS I+A LVD+F+FP S FTQ+F+V V+FG+GTDY Sbjct: 192 ILIIVFRSPIVPIVSLLTVGVSYLVSMGIIAHLVDQFNFPFSNFTQVFVVVVLFGVGTDY 251 Query: 252 CILLISRFKEELATAEDTRSAIISTYRKAGGTVFYSGLAVFVGFLAIGLSKFMLYRSAVA 311 ILL +RFKEEL+ E+ A T++ AG TV YSG+AV +GF ++ L+ F LY+S A Sbjct: 252 NILLFTRFKEELSKQENAFLATKETFKSAGKTVLYSGIAVLIGFASLALASFKLYQSTSA 311 Query: 312 VAVGIAVMLLALVTVVPFFMAVLGKKLFWPSSSKLEHSESGIWGAAGSFSLKRPWXXXXX 371 VA+G+AV+LL L T+ PFFM +LGK +F+P + H +S +WG S+ RP+ Sbjct: 312 VAIGVAVLLLVLTTLNPFFMVLLGKGMFYPVKTFKGHEDSRLWGFFAKNSVVRPFVALII 371 Query: 372 XXXXXXXXXXTYSGKLSFNSMDEIGPGYASVKGFNIISDSFGPGESMPGKIVIKNDDRMD 431 YS L++N + E+ Y S G N+I + F PG S P + I++++++D Sbjct: 372 VFVISIPFILKYSNTLNYNDLFEVDNKYESKMGINVIEEHFPPGFSSPSTLAIQSNNKLD 431 Query: 432 TSEYMGLAEKISRELEKVDGVKAVRSMSRPTGEQINDFLIPTQVAALTDGLSQSNEGLTK 491 + + ++++ ++ KV GV V + +RPTG++I + I Q L GL +N G+ + Sbjct: 432 EASSLQTLDELTDKILKVKGVSEVYAPTRPTGDRIKELYINKQAGELNTGLGDANGGIKE 491 Query: 492 IQSGLEEASKQLKGNEPKLNEAVSGSAKLTEGTAELKKGIDALGDGLSRIERGIKSGSSG 551 I GL A ++ GN K + +++ KL +GT E K G+ ALG L+++ GI G+ G Sbjct: 492 INDGLTTAKDKM-GN--KDSNSLANVQKLIDGTNEAKNGVSALGTALNQLSNGINDGAKG 548 Query: 552 AGEIKXXXXXXXXXXXXXXXXXXXXXXGYQKIXXXXXXXXXXXXXXXXXXXXVASALAGL 611 A +I+ GY ++ + Sbjct: 549 AQQIESGLTSVNENISILSHAASQLHAGYTQLEKGLSSYGQYFGSISQAIDGAKKGYEQI 608 Query: 612 DASFTGLENAHPDLLQDVNYQTIKGTVTQSXXXXXXXXXXXXQISGQLKXXXXXXXXXXX 671 + T P+L D N G ++ Q++ Q Sbjct: 609 EMLMTNFIQTKPELANDPNILQTIGIAKEAQKQLGGLSNELNQLATQHNAAMGSFKEANQ 668 Query: 672 XXXXXXXXXXXXXXXLDKLVAGIGQLQSGLNQAAAGQGQIVDKIPSISSXXXXXXXXXXX 731 + KL G L++GLN+ A+G QI +K + + Sbjct: 669 SLLKVDNGLKEMSNGVTKLQKGAADLKNGLNEGASGSKQIANKSSELQTGLTKINDGQGQ 728 Query: 732 XXXXXXXXTGQIGKLTDGLSDSADGLKQITGGLNSAQDYLKQIQDAKDDELSGFLVPEEA 791 Q+G+L GLS S +GL++++ GL AQ YL ++ ++K E F +P+E Sbjct: 729 LLTGLKDLQEQMGQLQSGLSKSTEGLEKVSNGLGDAQKYLGELNESKSSE--KFYIPKEV 786 Query: 792 LKEGGIQQVFDNYLSSDRKVMTLDVVYAANPYSAKAIDSMGDIQAAVDRAVKGTKLENAE 851 L+ Q+ + Y+S DRK + ++ NPYS +A+ + +I +D +KGT+L +A+ Sbjct: 787 LEGEDFQKALNTYMSHDRKTAKMTIILDVNPYSKEAMPVIQEINKTIDGTLKGTELNHAK 846 Query: 852 TAISGVSSTYSDLQKISNEDYTRTXXXXXXXXXXXXXXXXRSIIMPLYLIVSLLITYFTA 911 TAI G ++ DL++++ +D+ RT RS++ +++I SLL+ YF + Sbjct: 847 TAIGGTTARNVDLKEVTGQDFLRTATIMLIGIAIVLMMITRSLLNTIFIIGSLLLAYFAS 906 Query: 912 LGVTEAIFVHVLDYSGITWTTPFFSFVMLIALGVDYSIFLMDRFNENKTWDVREAILHAM 971 LG++E I HVL ++W PFFSF+M++ALGVDYSIF+M R+NE + D I+ A Sbjct: 907 LGISEQISTHVLHVDSLSWNVPFFSFIMIVALGVDYSIFVMMRYNELE-GDPATKIVTAS 965 Query: 972 RNMGTVILSAVVILGGTFASMYPSGVLSMMQIATVV 1007 R++G V+LSA +ILGGTFA++ PSGVL+++Q+A+VV Sbjct: 966 RHIGGVVLSAAIILGGTFAALIPSGVLTLIQVASVV 1001 >ref|NP_149265.1| Membrane protein [Clostridium acetobutylicum] gb|AAK76847.1| Membrane protein [Clostridium acetobutylicum] Length = 1058 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 308/1024 (30%), Positives = 508/1024 (49%), Gaps = 35/1024 (3%) Query: 1 LKTVLKARWAIIAVWLSAAVVLFMTAPGMSDLVREKGQISVPDGYTSTRAAEIMKEVADA 60 L +L + I W V+ T P M LVR+KGQ+++ Y+ + A I+ ++ D Sbjct: 9 LNKLLNKSYLSIVFWALILTVILFTMPDMGKLVRDKGQVTIGKEYSYSTAQNILNKLNDV 68 Query: 61 KGGETLHQVALVFNKPDGLAAEDTESIKQGVEKLAAEKEALKIDSITDPFSQAELKDTLI 120 K + + V +V++ L IK V KL K + ++ + F+ +++D +I Sbjct: 69 KSSDKVLDVIMVYHSDKKLTDSALNEIKDKVTKLENNKNKYNVKTVLNVFTNKDIEDQVI 128 Query: 121 AKDGKTIMVALMVNGGEEAVKQLPDQVDKLLSGVSADHYLTSEGLITEDTIVSSEAGLKK 180 +KD T++V + + + + +++ K++ Y T I+ED + EAG+KK Sbjct: 129 SKDKTTLLVPISIKQKGRTTETIRNEITKVMKTDKVTSYSTGSDFISEDFSKTIEAGVKK 188 Query: 181 SEYITXXXXXXXXXXXXRSFVAPFVPLLTVGLSYIVSQSIVAFLVDRFDFPLSTFTQIFM 240 +E IT +S V PF L TVGLSY+ S IV LVD+F+F +S FT +F+ Sbjct: 189 TELITIFLIIAILIAVFKSPVTPFATLATVGLSYLTSLGIVLQLVDKFNFSISNFTNVFL 248 Query: 241 VAVMFGIGTDYCILLISRFKEELATAEDTRSAIISTYRKAGGTVFYSGLAVFVGFLAIGL 300 V V+FGIGTDY +LL++RFKEEL DT SAII TY+ AG TV S L + +GF + Sbjct: 249 VLVLFGIGTDYTMLLLTRFKEELNNGLDTNSAIIVTYKTAGKTVILSSLTILIGFSCLMA 308 Query: 301 SKFMLYRSAVAVAVGIAVMLLALVTVVPFFMAVLGKKLFWPSSSKLEHSESGIWGAAGSF 360 S+F +Y+SA AVAVG+AV+++ + T +P M + G LFW HS + W A + Sbjct: 309 SQFKIYQSASAVAVGVAVLIIMIFTFLPALMKLFGIHLFWSPFKSSGHSSNKAWEKAATI 368 Query: 361 SLKRPWXXXXXXXXXXXXXXXTYSGKLSFNSMDEIGPGYASVKGFNIISDSFGPGESMPG 420 S K P+ Y+ LSFN++ EI Y SVKGFNI+S FG G+++P Sbjct: 369 STKYPFFALILVLAVCGLSYF-YTSSLSFNNLKEIASNYPSVKGFNIVSKHFGVGKALPV 427 Query: 421 KIVIKNDDRMDTSEYMGLAEKISRELEKVDGVKAVRSMSRPTGEQINDFLIPTQVAALTD 480 + I+ND R+D + ++I+ ++ V GVK V S+++P G++I D I Q +L Sbjct: 428 NVAIENDYRLDNQYTLSEIDEITEAIKSVKGVKEVCSVTQPKGKKIKDLYIKDQANSLNG 487 Query: 481 GLSQSNEGLTKIQSGLEEASKQLKGNEPKLNEAVSGSAKLTEGTAELKKGIDALGDGLSR 540 GL ++ G+ KI +GL +A +L+G + N KL +G +L +D + + Sbjct: 488 GLKDADGGVNKINNGLGDAVSKLQGAKVDTNSL----DKLQKGANDLSSNMDLINKATNE 543 Query: 541 IERGIKSGSSGAGEIKXXXXXXXXXXXXXXXXXXXXXXGYQKIXXXXXXXXXXXXXXXXX 600 ++ G+ SG G+ ++ Y I Sbjct: 544 LKNGMNSGVQGSKDLSNGIQALDDSIGKLQDSTNDLQNAYTAIGKGYGQVGEGLNSLLPQ 603 Query: 601 XXXVASALAGLDASFTGLENAHPDLLQDVNYQTIKGTVTQSXXXXXXXXXXXXQISGQLK 660 +A + + L HP+L D + T++ T +++ +L+ Sbjct: 604 VKNFQTAFGSVIYMQSQLAAKHPELNSDPTFVTMQQT--------------SLKLNSKLQ 649 Query: 661 XXXXXXXXXXXXXXXXXXXXXXXXXXLDKLVAGIGQLQSG--------------LNQAAA 706 L + +GIG ++SG L +AA Sbjct: 650 DMVDAITKLKAGLDEANSSLKKANNGLSQAQSGIGAMKSGSEALRSGSLTMANKLAEAAD 709 Query: 707 GQGQIVDKIPSISSXXXXXXXXXXXXXXXXXXXTGQIGKLTDGLSDSADGLKQITGGLNS 766 GQ ++ + + + + + +LTDGLS + GL I+ GLN Sbjct: 710 GQNKVANAMGQLDEGSKQLQDGQNQLINGISGISDKTKQLTDGLSTAQKGLTDISTGLND 769 Query: 767 AQDYLKQIQDAKDDELSGFLVPEEALKEGGIQQVFDNYLSSDRKVMTLDVVYAANPYSAK 826 A Y+ ++Q +K+ E F +P++ + + D Y+S DRK+ ++V +PYS Sbjct: 770 ANSYIDKLQKSKNSE--TFFIPQDKINNSDFSKSMDMYMSKDRKITEINVTLNIDPYSED 827 Query: 827 AIDSMGDIQAAVDRAVKGTKLENAETAISGVSSTYSDLQKISNEDYTRTXXXXXXXXXXX 886 A+ I + V +K + L+N++ ISG+S +DL+ +S +D+ ++ Sbjct: 828 AMKITDKINSVVAAKIKTSTLKNSKLGISGISQMNNDLKTMSQKDFNKSSIIMICGILIV 887 Query: 887 XXXXXRSIIMPLYLIVSLLITYFTALGVTEAIFVHVLDYSGITWTTPFFSFVMLIALGVD 946 R M ++++ SL+ +Y+ A+ ++ +F +VL ++W PFFSF+M+I+LGVD Sbjct: 888 LLIVTRDSWMSIFIMASLVASYYIAISISGLLFNNVLGKGDLSWNVPFFSFIMIISLGVD 947 Query: 947 YSIFLMDRFNENKTWDVREAILHAMRNMGTVILSAVVILGGTFASMYPSGVLSMMQIATV 1006 YSIFL+ R+ EN +EAI+ A +++G VI SA +IL GTFA+MYPSGV ++M+++ Sbjct: 948 YSIFLVMRYRENLDLPSKEAIVSAAKSVGGVISSAGIILSGTFAAMYPSGVPTLMELSLT 1007 Query: 1007 VLSG 1010 V+ G Sbjct: 1008 VILG 1011 >ref|ZP_00183302.1| hypothetical protein Exigu129601 [Exiguobacterium sp. 255-15] Length = 889 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/504 (44%), Positives = 308/504 (61%), Gaps = 7/504 (1%) Query: 1 LKTVLKARWAIIAVWLSAAVVLFMTAPGMSDLVREKGQISVPDGYTSTRAAEIMKEVADA 60 ++ ++K RW I+ V L A V LF+ AP +S + G I + S RAA+I+K Sbjct: 1 MRQIVKWRWPIVIVLLLATVGLFLAAPNLSKQAEDAGAIQLASDTDSQRAADILK----- 55 Query: 61 KGGETLHQVALVFNKPDGLAAEDTESIKQGVEKLAAEKEALKIDSITDPFSQAELKDTLI 120 G + ++LV + + +D I Q V+ L EK + + DPF E + LI Sbjct: 56 AAGASEETISLVIPLKEAVTKQDRTEIGQIVKDL--EKLDQPVTGVLDPFESKETEGQLI 113 Query: 121 AKDGKTIMVALMVNGGEEAVKQLPDQVDKLLSGVSADHYLTSEGLITEDTIVSSEAGLKK 180 +KD KT++V + V+G +E + L + + L YLT E LI D SS+ GLK+ Sbjct: 114 SKDKKTVLVPITVDGSQEEITALAEDIRSDLLPDDRTIYLTGESLINADVNKSSQEGLKR 173 Query: 181 SEYITXXXXXXXXXXXXRSFVAPFVPLLTVGLSYIVSQSIVAFLVDRFDFPLSTFTQIFM 240 +E IT RS V PFVPL VG++Y++SQS VAF VD F FP+S FTQIF+ Sbjct: 174 TELITVGLIFGLLLIVFRSIVTPFVPLFAVGVTYLMSQSFVAFFVDWFGFPVSNFTQIFL 233 Query: 241 VAVMFGIGTDYCILLISRFKEELATAEDTRSAIISTYRKAGGTVFYSGLAVFVGFLAIGL 300 VA++FGIGTDYCILL+SR+KEEL D +AI++TY+ AG T+ SGLAV VGF AIG Sbjct: 234 VAILFGIGTDYCILLLSRYKEELTAGHDVETAIVNTYKTAGRTLLISGLAVLVGFSAIGF 293 Query: 301 SKFMLYRSAVAVAVGIAVMLLALVTVVPFFMAVLGKKLFWPSSSKLEHSESGIWGAAGSF 360 + F +++S+VAVAVGIAV+LL L T+VPFFMA L +KLFWPS + H +S +W G Sbjct: 294 ADFPIFKSSVAVAVGIAVLLLVLFTLVPFFMATLKEKLFWPSKNAASHQDSRLWARYGGL 353 Query: 361 SLKRPWXXXXXXXXXXXXXXXTYSGKLSFNSMDEIGPGYASVKGFNIISDSFGPGESMPG 420 S++RP TY LSFN++DEIG Y +VKG N ISD FG GES+P Sbjct: 354 SIRRPLLAMAIVAVVTIPTLFTYDDDLSFNTVDEIGAKYETVKGLNAISDGFGAGESLPV 413 Query: 421 KIVIKNDDRMDTSEYMGLAEKISRELEKVDGVKAVRSMSRPTGEQINDFLIPTQVAALTD 480 I++K+D + T + + AE++SREL K+DGVKAVRS+SRPTGE I+D + Q+ + Sbjct: 414 NIILKDDQNIVTEKTVPYAEQLSRELVKLDGVKAVRSISRPTGEVIDDLYVDQQLKQVAS 473 Query: 481 GLSQSNEGLTKIQSGLEEASKQLK 504 GL+ + +GL ++ GL+ LK Sbjct: 474 GLTDAKDGLGEVGQGLQTVEDNLK 497 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 119/304 (39%), Positives = 177/304 (58%), Gaps = 6/304 (1%) Query: 741 GQIG----KLTDGLSDSADGLKQITGGLNSAQDYLKQIQDAKDDELSGFLVPEEALKEGG 796 GQ+G +L DG+ + +GL +I GL A D+LK++ ++K +G +P++ L Sbjct: 579 GQLGNGLTQLADGVGSANNGLGKIEDGLKEAADFLKEMGNSKTIRGTGMFIPKDTLSSKD 638 Query: 797 IQQVFDNYLSSDRKVMTLDVVYAANPYSAKAIDSMGDIQAAVDRAVKGTKLENAETAISG 856 + V D Y D+ + +V+ +PYS +AI+++ I+ +K T LE A+ A G Sbjct: 639 FEPVIDRYTIDDKTGLKFEVILDDDPYSPEAIETVAAIKKTTASTLKDTPLEQAQVAYGG 698 Query: 857 VSSTYSDLQKISNEDYTRTXXXXXXXXXXXXXXXXRSIIMPLYLIVSLLITYFTALGVTE 916 +SS SDL S D++RT RS+IMPL++I SLL+TY+T++ + E Sbjct: 699 ISSINSDLNDTSKADFSRTVVIMIISLFIVLAIMFRSLIMPLFMIGSLLLTYYTSVSIAE 758 Query: 917 AIFVHVLDYSGITWTTPFFSFVMLIALGVDYSIFLMDRFNENKT--WDVREAILHAMRNM 974 IFV+ L Y GI+W PFF FVML+ALG+DYSIFL+DRF E + EA+ +M+ M Sbjct: 759 LIFVNGLGYDGISWAVPFFGFVMLVALGIDYSIFLLDRFREETINGLETNEAMYVSMKKM 818 Query: 975 GTVILSAVVILGGTFASMYPSGVLSMMQIATVVLSGXXXXXXXXXXXXXXXXXXXXGRAN 1034 G+VI++A +IL GTF +M PSGVLS++QIAT+V++G G Sbjct: 819 GSVIITAAIILAGTFGAMMPSGVLSLVQIATIVITGLLLYGLIVLPLLIPAITVSFGPGV 878 Query: 1035 WWPF 1038 WWPF Sbjct: 879 WWPF 882 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.133 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,195,657,367 Number of extensions: 43081516 Number of successful extensions: 144518 Number of sequences better than 1.0e-05: 148 Number of HSP's gapped: 144317 Number of HSP's successfully gapped: 261 Length of query: 1052 Length of database: 757,237,578 Length adjustment: 136 Effective length of query: 916 Effective length of database: 387,984,114 Effective search space: 355393448424 Effective search space used: 355393448424 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)