BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0490.0061.p
         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_243381.1| cation-transporting ATPase [Bacillus halodurans...    97   1e-19
ref|NP_692421.1| cation-transporting ATPase [Oceanobacillus ihey...    78   8e-14
ref|NP_657843.1| E1-E2_ATPase, E1-E2 ATPase [Bacillus anthracis ...    76   2e-13
ref|NP_980212.1| cation-transporting ATPase, E1-E2 family [Bacil...    76   2e-13
ref|NP_389448.1| similar to calcium-transporting ATPase [Bacillu...    76   3e-13

>ref|NP_243381.1| cation-transporting ATPase [Bacillus halodurans]
 pir||C83964 cation-transporting ATPase pacL [imported] - Bacillus halodurans
           (strain C-125)
 dbj|BAB06234.1| cation-transporting ATPase [Bacillus halodurans]
          Length = 902

 Score = 97.1 bits (240), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 3/62 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            +IG+ TLAAFWLTL+    +P  L RAQSVAF TLVMAQLIHVFDCRS  SVFHRNPF+
Sbjct: 785 FMIGVVTLAAFWLTLQ---ANPDDLTRAQSVAFVTLVMAQLIHVFDCRSEYSVFHRNPFE 841

Query: 61  NK 62
           NK
Sbjct: 842 NK 843


>ref|NP_692421.1| cation-transporting ATPase [Oceanobacillus iheyensis HTE831]
 dbj|BAC13456.1| cation-transporting ATPase [Oceanobacillus iheyensis HTE831]
          Length = 884

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 3/61 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
           +LIG+ TL AF +T +    +P+ L+ AQ+ AFATLV+AQLIHVFDCRS  SVF RNPF 
Sbjct: 771 ILIGIVTLIAFMVTYQ---NNPEHLIYAQTTAFATLVVAQLIHVFDCRSEHSVFARNPFG 827

Query: 61  N 61
           N
Sbjct: 828 N 828


>ref|NP_657843.1| E1-E2_ATPase, E1-E2 ATPase [Bacillus anthracis A2012]
 ref|NP_846254.1| cation-transporting ATPase, E1-E2 family [Bacillus anthracis str.
           Ames]
 gb|AAP27740.1| cation-transporting ATPase, E1-E2 family [Bacillus anthracis str.
           Ames]
          Length = 906

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 3/61 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            LIG  TL AF +        P +L  AQ+VAFATLV+AQLIHVFDCRS  SVFHRNPF 
Sbjct: 774 FLIGAVTLVAFIIAYN---QHPNELKYAQTVAFATLVLAQLIHVFDCRSEHSVFHRNPFG 830

Query: 61  N 61
           N
Sbjct: 831 N 831


>ref|NP_980212.1| cation-transporting ATPase, E1-E2 family [Bacillus cereus ATCC
           10987]
 gb|AAS42820.1| cation-transporting ATPase, E1-E2 family [Bacillus cereus ATCC
           10987]
          Length = 907

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 3/61 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            LIG  TL AF +        P +L  AQ+VAFATLV+AQLIHVFDCRS  SVFHRNPF 
Sbjct: 774 FLIGAVTLVAFIIAYN---QHPNELKYAQTVAFATLVLAQLIHVFDCRSEHSVFHRNPFG 830

Query: 61  N 61
           N
Sbjct: 831 N 831


>ref|NP_389448.1| similar to calcium-transporting ATPase [Bacillus subtilis]
 pir||H69877 calcium-transporting ATPase homolog yloB - Bacillus subtilis
 emb|CAA74269.1| putative PacL protein [Bacillus subtilis]
 emb|CAB13439.1| yloB [Bacillus subtilis subsp. subtilis str. 168]
          Length = 890

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            LIG+ T+ AF +       +P+ L  AQ++AFATLV+AQLIHVFDCRS  SVF RNPFQ
Sbjct: 773 FLIGVATILAFIIVYH---RNPENLAYAQTIAFATLVLAQLIHVFDCRSETSVFSRNPFQ 829

Query: 61  N 61
           N
Sbjct: 830 N 830


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.330    0.136    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 114,171,092
Number of extensions: 2228503
Number of successful extensions: 6553
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 6556
Number of HSP's successfully gapped: 6
Length of query: 111
Length of database: 757,237,578
Length adjustment: 77
Effective length of query: 34
Effective length of database: 548,174,955
Effective search space: 18637948470
Effective search space used: 18637948470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 120 (50.8 bits)