BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0490.0038.p (743 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00181528.1| hypothetical protein Mther045901 [Moorella th... 419 e-115 ref|NP_389459.1| similar to protein kinase [Bacillus subtilis] >... 417 e-115 ref|NP_243370.1| serine/threonine protein kinase [Bacillus halod... 405 e-111 ref|ZP_00099235.1| COG2815: Uncharacterized protein conserved in... 402 e-110 ref|NP_471268.1| similar to putative serine/threonine-specific p... 380 e-104 >ref|ZP_00181528.1| hypothetical protein Mther045901 [Moorella thermoacetica ATCC 39073] Length = 612 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 262/655 (40%), Positives = 369/655 (56%), Gaps = 60/655 (9%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 MIG L GRY+++ +GGGGMA VYR D LLNRNV IK+LR Q+ D+EF+ RF+REAQ Sbjct: 1 MIGKVLEGRYEIVSELGGGGMARVYRGQDRLLNRNVTIKILREQYASDKEFLARFQREAQ 60 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 + ASLSHPNVVSIYDVGQED++HY++MEYVEG++L ++I ERAPL EA+ I+ QICDA Sbjct: 61 AVASLSHPNVVSIYDVGQEDDLHYLIMEYVEGRSLKDLISERAPLPPLEAIDISLQICDA 120 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 L+HAH+N +IHRDIKPHNILI RNGRVKVTDFGIA+AV+ T++Q+G+++GSVHY +PE Sbjct: 121 LEHAHENGVIHRDIKPHNILITRNGRVKVTDFGIAQAVSEVTMSQSGTMIGSVHYLAPEQ 180 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G G +D+YSLGIVLY+MLTG LPF GE+P++VALKHLQE R LNP +P ++ Sbjct: 181 ARGGVIGATADIYSLGIVLYEMLTGDLPFHGETPVAVALKHLQENPRPVRELNPNVPPAL 240 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIRPM 300 E V++R++ K+P RY SA + D LL R + + F T+++PAI Sbjct: 241 ERVVMRTLEKDPARRYPSAAALRSD----LLAVRNALADATFA-------TQVLPAIE-- 287 Query: 301 QRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLWISLTLLVLIAMGGVVWY-VNAKL 359 P R+ R W+ + LL L +W L Sbjct: 288 -----------------TPDPPSTLPKPRRRPRVWAWVLMALLFLGLAAAGLWAGFRYYL 330 Query: 360 AVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDTMVKED 419 AV E VP V GL A +LA GL + A +Y+A+ V+ Q P+ V+ Sbjct: 331 AVGETLVPSVVGLPEGQALEQLAAAGLRG-QVIARQYDASVPAGQVMAQDPGPNQRVRRG 389 Query: 420 THIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPD--QRYSEDFPEGQVIG 477 +ALTV+ L ++ + G+TE A LI E + ++ D + Y P G V+ Sbjct: 390 RVVALTVSQGARLVRVPSVIGETERNA--RLILENAN-LKVAADTLKVYHPSIPAGSVVD 446 Query: 478 TEPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQ------AEAKSLLEAAGLVLGXX 531 P +++ P ++LI+S+G E P T P AEA+ L A L G Sbjct: 447 QNPPANTQ-QPEGTEVRLIISKGPE----PQFTTAPSVVGLSLAEAQQKLLEAKLKQGTL 501 Query: 532 XXXXXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKGYPPEALEYTFNVPVAPSVEGTK 591 G ++ Q P E G G IN+ VS+G P ++ V + P+ + Sbjct: 502 TYQRSDNQFPGYIIAQDPRE-GSNVLQGSAINLVVSQG--PGPVQKQVGVTIDPAPDDKD 558 Query: 592 TKIRIIYADARKDGENQEWGTRTIAKSQRLAVKLLLAPN--KDGSVSVYQDGDFV 644 ++RI+ DA+ E + K Q++ ++ N G + V++DG+ + Sbjct: 559 HEVRIVVTDAKGTNE-------VLKKKQKMGQQIQATINYFGKGKLQVFRDGNVI 606 >ref|NP_389459.1| similar to protein kinase [Bacillus subtilis] sp|O34507|PKN2_BACSU Probable serine/threonine-protein kinase yloP pir||H69878 probable protein kinase (EC 2.7.1.-) yloP - Bacillus subtilis emb|CAA74267.1| putative Pkn2 protein [Bacillus subtilis] emb|CAB13450.1| protein kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 648 Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust. Identities = 255/656 (38%), Positives = 367/656 (55%), Gaps = 18/656 (2%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 +IG + GRYQ++ IGGGGMA VY A DI+L+R VAIK+LR + +D EFIRRFRREAQ Sbjct: 2 LIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQ 61 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 SA+SL HPN+VSIYD+G+ED+I+YIVMEYVEG L E I PL EA+ I QI A Sbjct: 62 SASSLDHPNIVSIYDLGEEDDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSA 121 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 + HAHQNQI+HRDIKPHNILI G +KVTDFGIA A++STTIT T SV+GSVHY SPE Sbjct: 122 IAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALSSTTITHTNSVLGSVHYLSPEQ 181 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G +KSD+Y+LGIVL+++LTG +PF GES +S+ALKHLQ E + NP +PQSV Sbjct: 182 ARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQSV 241 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIRPM 300 EN+IL++ K+P RY++A++M D++T +R +E + F +EDE+ T+ IP I+ Sbjct: 242 ENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKR--FTIQEDEEMTKAIPIIKDE 299 Query: 301 QRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLWISLTL-LVLIAMGGVVWYVNAKL 359 + K + W+ LT+ LV I G + V L Sbjct: 300 ELA-----KAAGEKEAEVTTAQENKTKKNGKRKKWPWVLLTICLVFITAGILAVTVFPSL 354 Query: 360 AV-DEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDTMVKE 418 + +V +P V+G+ +E A L K GL D + E +++K + DT VKE Sbjct: 355 FMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSEVLEISDEKIEEGLMVKTDPKADTTVKE 414 Query: 419 DTHIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPDQRYSEDFPEGQVIGT 478 + L + K +++ + G+T ++A K L +G + + +++ G VI Sbjct: 415 GATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFNHVTV---NEVNDEKNAGTVIDQ 471 Query: 479 EPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQAEAKSLLEAAGLVLGXXXXXXXXX 538 P+ +E P+ +KL VS G E + DL + A LE GL L Sbjct: 472 NPSAGTELVPSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKL-VEKEAYSDD 530 Query: 539 XXXGIVMEQWPYEKGDTASPGEKINITVSKG---YPPEALEYTFNVPVAPSVEGTKTKIR 595 G V++Q P G PG ++ +T S G P + ++ +P P EG + +++ Sbjct: 531 VPEGQVVKQKP-AAGTAVKPGNEVEVTFSLGPEKKPAKTVKEKVKIPYEPENEGDELQVQ 589 Query: 596 IIYADARKDGENQEWGTRTIAKSQRLAVKLLLAPNKDGSVSVYQDGDFVATYSIKY 651 I DA + + I + ++L + P + G V + V+ +I+Y Sbjct: 590 IAVDDADHSISDT-YEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYKTIEY 644 >ref|NP_243370.1| serine/threonine protein kinase [Bacillus halodurans] pir||H83962 serine/threonine protein kinase BH2504 [imported] - Bacillus halodurans (strain C-125) dbj|BAB06223.1| serine/threonine protein kinase [Bacillus halodurans] Length = 664 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 260/686 (37%), Positives = 376/686 (54%), Gaps = 68/686 (9%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 MIG + GRY+++E IGGGGMA VY+A D++L+R VA+KVL+ QF DE+FI+RFRREAQ Sbjct: 1 MIGKRISGRYEILETIGGGGMADVYKAMDVILDRQVAVKVLQAQFSKDEQFIKRFRREAQ 60 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 +A SL+H NVVSIYDVG+E+ ++YIVMEYVEG L E+I++R PL VDE + I SQ+ A Sbjct: 61 AATSLAHQNVVSIYDVGEEENLYYIVMEYVEGPTLKELIQQRGPLPVDETIDIMSQMMAA 120 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 + HAH NQI+HRDIKPHNILIG +G VKVTDFGIARA++S TIT T SV+GSVHY SPE Sbjct: 121 ISHAHMNQIVHRDIKPHNILIGEDGVVKVTDFGIARAMSSATITHTNSVMGSVHYLSPEQ 180 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G KSD+YSLGIVL++M+TG LPF G++ +S+ALKHLQ + P+ + P +PQS+ Sbjct: 181 ARGGLVTFKSDIYSLGIVLFEMVTGQLPFSGDTAVSIALKHLQNDIPSPKEIQPSLPQSI 240 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIRPM 300 ENVI+++ K+P RY S EM +DL T L P R +E + E+DE+ T+ IP I+ Sbjct: 241 ENVIVKATAKDPFYRYGSVSEMDEDLSTALDPARVNE-RPYDQKEDDEEATKAIPIIKDE 299 Query: 301 QRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAV------LWISLTLLVLIAMGGVV-- 352 Q + K + LW L +L L+ GV Sbjct: 300 QLEQEDFEKTMEAPPIKKVEEPKAPAAEEKVKKPKKKRRKWLWAVLIVLFLLIGTGVTAL 359 Query: 353 -----WY-------VNAKLAVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANF 400 W+ + + + E A ++ L E + + V D+ PA E Sbjct: 360 ALMPSWFQVDDVDVPDVRESSFEEAEAELRSLGLEVERED------VEDDAPAEE----- 408 Query: 401 EPDVVLKQSKEPDTMVKEDTHIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRI 460 V+ Q P ++VK+ + + L V+ +MI + G+T EEA +LL D + + Sbjct: 409 ----VVSQHPRPGSVVKQGSTVRLFVSTGPEEGQMIDVTGRTIEEAQRLL----NDFADV 460 Query: 461 TPDQRYSEDFPEGQVIGTEPAVDSEYDPATATIKLIVSQGKETADV--PDLTNKPQAEAK 518 ++R + D G VI P P T+ LI S T+D+ ++ + EA Sbjct: 461 RLEERETNDVSPGIVIEQTPEAGESVVPEETTVTLIYSA---TSDIVLENMQGMTENEAH 517 Query: 519 SLLEAAGLVLGXXXXXXXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKGYPPEA---- 574 L+ GL G V+ P G T S G+ + I VS+G P+ Sbjct: 518 GYLQENGL-RTRFSYDYSSSVAEGRVISHSP-ASGATVSEGDDVTIVVSRGPEPQTDQGG 575 Query: 575 --------------LEYTFNVPVAPSVEGTKTKIRIIYADARKDGENQEWGTRTIAKSQR 620 + N P+ S E ++RI+Y DA G+++ + TI++++ Sbjct: 576 GQQEQPQQPQQPQTRSHLVNQPIEASQE---VQVRIVYRDATTGGQDRVFIDETISETKT 632 Query: 621 LAVKLLLAPNKDGSVSVYQDGDFVAT 646 + L + ++ GS +Y +G+FV + Sbjct: 633 YQIPLEASADQPGSFDLYINGEFVKS 658 >ref|ZP_00099235.1| COG2815: Uncharacterized protein conserved in bacteria [Desulfitobacterium hafniense] Length = 579 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 234/582 (40%), Positives = 344/582 (59%), Gaps = 35/582 (6%) Query: 6 LGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQSAASL 65 L RY++IE+IG GGMA+VY+A D+LLNR VAIK+L QF DEEF+RRFRREAQSAASL Sbjct: 5 LSNRYEIIEKIGSGGMAIVYKAKDLLLNRIVAIKILHEQFTADEEFVRRFRREAQSAASL 64 Query: 66 SHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDALDHAH 125 SH N+VSIYDVG++ E YIVME++EG+NL +II+ APL ++ + + QI +A+ HAH Sbjct: 65 SHANIVSIYDVGKDGETEYIVMEHIEGQNLKDIIRNYAPLSTEQTLELGIQIAEAIRHAH 124 Query: 126 QNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEHAKGVT 185 ++ IIHRDIKPHNIL+ +GR+KVTDFGIARAV++ T+T TG +VGSVHY SPE A+G+ Sbjct: 125 EHHIIHRDIKPHNILVTEDGRIKVTDFGIARAVSAATMTHTGDIVGSVHYLSPEQARGIQ 184 Query: 186 TGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSVENVIL 245 T E+SDLYSLGI+LY++LTG +P+ GE+PIS+ALKHLQE P LN + ++EN+++ Sbjct: 185 TNEQSDLYSLGIILYELLTGKVPYDGETPISIALKHLQELAVPPSKLNARVSPALENLVM 244 Query: 246 RSMRKNPEERYQSAKEMLQDLETCL--LPERRSESKTQFHDEEDEDRTRIIPAIRPMQRG 303 RS+ K+P++RY +AK++LQDL LP ++ +++D + TR+ ++R Sbjct: 245 RSIAKSPDQRYATAKDLLQDLRKVQAGLPVDKT-----VDEDQDLESTRVHSSLR----- 294 Query: 304 LXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVL-----WISLTLLVLIAMGGVVWYVNAK 358 G++K+ + W++L LVLI GG V ++ Sbjct: 295 ---------AGVNSALASEEKEAGRKKAKVPLFRKRWPWVALLALVLIMGGGWV-ALSQW 344 Query: 359 LAVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDTMVKE 418 V VP + G + + A + GL D EYN + E + + E +VK+ Sbjct: 345 FNVGTTTVPPLVGKTIQEAGYFAEQKGLSLDPNTQEEYNNDMEKGKITRTDPEEGAVVKK 404 Query: 419 DTHIALTVNIPKPLSKMIP---LAGKTEEEAIKLLIAEGVDQSRITPDQRYSEDFPEGQV 475 + I + V++ P IP T+E AI L ++G + I + + P+G V Sbjct: 405 ERGIKVWVSL-GPEQARIPNLKTGDITQEAAINFLESQGFKRDNIVAQEDQNSSLPKGIV 463 Query: 476 IGTEPAVDSEYDPATATIKLIVSQGK--ETADVPDLTNKPQAEAKSLLEAAGLVLGXXXX 533 + +PA S++ P I L VS GK E +P++ ++ A+AK++LE + Sbjct: 464 VEQDPAPGSDW-PKNGKITLTVSAGKVDEPKPMPNVISRSPADAKAILEQQYELKVIVDS 522 Query: 534 XXXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKGYPPEAL 575 +VM P + GD G+ + I +S+G P A Sbjct: 523 ENSTEYPSDVVMATDP-KPGDMVKKGDTVRIIISRGPGPIAF 563 >ref|NP_471268.1| similar to putative serine/threonine-specific protein kinase [Listeria innocua] pir||AD1674 probable serine/threonine-specific protein kinase homolog lin1934 [imported] - Listeria innocua (strain Clip11262) emb|CAC97164.1| lin1934 [Listeria innocua] Length = 657 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 236/598 (39%), Positives = 346/598 (57%), Gaps = 18/598 (3%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 MIG L RY+++ IGGGGMA VY AHDI+L+R+VA+K+LR + IRRF+REAQ Sbjct: 2 MIGKRLNDRYKILHAIGGGGMANVYLAHDIILDRDVAVKILRIDLADESNLIRRFQREAQ 61 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 SA SL HPN+VS+YDVG+E+++HYIVME+V+G +L + I+E P+ D+AV I QI A Sbjct: 62 SATSLVHPNIVSVYDVGEENDLHYIVMEHVDGMDLKQYIQENHPISYDKAVDIMLQIVSA 121 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 + AHQ+ IIHRD+KP NILI +G VK+TDFGIA A++ T+ITQT S++GSVHY SPE Sbjct: 122 VAIAHQHHIIHRDLKPQNILIDHDGVVKITDFGIAMALSETSITQTNSLLGSVHYLSPEQ 181 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G +KSD+YSLGIVLY++LTG +PF GES +S+A+KHLQ E R NP IPQS+ Sbjct: 182 ARGGMATQKSDIYSLGIVLYELLTGKVPFDGESAVSIAIKHLQAEIPSARAQNPEIPQSL 241 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIP----- 295 EN+I+++ K+P RYQ+A+EM +DL+TCL +R +E K F +D+ T+ IP Sbjct: 242 ENIIIKATAKDPFLRYQNAEEMEKDLQTCLNKDRLNEPKYVFPTNDDDGDTKTIPIIATK 301 Query: 296 -AIRPMQRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLWISLTLLVLIAMGGVVWY 354 A++ + + + K + +L +S +++VL +G ++ + Sbjct: 302 EAMQNLDKTIVPEGKVAAEEVAVDDKKGKKKKKMSKKKKIILIVS-SVIVLFIIGILLLW 360 Query: 355 VNAKLAVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDT 414 + K + DEVAVP V+G + + A A L K G V + A + + + E V+ Sbjct: 361 LLGK-SPDEVAVPDVSGKTEDQAIALLQKDGFVIGK-TAEKNSDDVEEGKVINTDPSAGE 418 Query: 415 MVKEDTHIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPDQRYSEDFPEGQ 474 M ++ T I L V+I M G++ E LL +G + I+ ++ YS + +G Sbjct: 419 MKEKGTKINLFVSIGSKKITMEDYTGRSYSETKTLLEQQGFN--NISAEEAYSSEVGKGM 476 Query: 475 VIGTEPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQAEAKSLLEAAGLVLGXXXXX 534 +I P +E + +K +VS+G E + DL + + GL + Sbjct: 477 IISQTPTQGTEVVAKSTDVKFVVSKGAEPITLKDLRGYTKTAVEDYASPLGLKVS-SKEE 535 Query: 535 XXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKGYPPEA----LEYTFNVPVAPSVE 588 G V+ Q P G + G+ I I +S G P E + TFN+P PS E Sbjct: 536 NSNSVEKGQVISQSP-SAGTAINAGDTIEIVISAG-PKEKQVKEVTKTFNIPYTPSDE 591 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.314 0.133 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 994,401,008 Number of extensions: 39663077 Number of successful extensions: 121003 Number of sequences better than 1.0e-05: 12178 Number of HSP's gapped: 105891 Number of HSP's successfully gapped: 12333 Length of query: 743 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 610 Effective length of database: 396,129,411 Effective search space: 241638940710 Effective search space used: 241638940710 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 130 (54.7 bits)