BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0489.0032.p (510 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] 354 3e-96 emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] 351 2e-95 pir||T44806 mycosubtilin synthetase chain mycA [imported] - Baci... 350 6e-95 emb|CAB13603.2| polyketide synthase [Bacillus subtilis subsp. su... 309 9e-83 ref|NP_389600.1| polyketide synthase of type I [Bacillus subtili... 303 9e-81 >dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] Length = 3982 Score = 354 bits (908), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 196/442 (44%), Positives = 269/442 (60%), Gaps = 31/442 (7%) Query: 3 IGIESSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSI 62 + +ESSD TKTF S+GTG GEGA AVLLKPL+ A++D DHI+ VIKGSA+NQDG + Sbjct: 880 LDMESSDGYTKTFSKDSDGTGTGEGAAAVLLKPLQDAVRDGDHIYGVIKGSAMNQDGTTA 939 Query: 63 GITAPDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKK 122 GITAP+P AQ EV+ AW++AGI PE LS+IEAHGTGT+LGDP+E G+ +AF +YT KK Sbjct: 940 GITAPNPAAQTEVIETAWKDAGIAPETLSFIEAHGTGTKLGDPVEFNGLCKAFEKYTAKK 999 Query: 123 QFCAIGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVND 182 QFCAIGS+K+NIGHL AAGI GL+K + L KK P HF +PN I+F +S YVN Sbjct: 1000 QFCAIGSVKSNIGHLFEAAGIVGLIKSVLMLNHKKNPPLAHFNEPNPLIHFHSSPFYVNQ 1059 Query: 183 RLQEWTTPGVPRLAGISSFGLSGTNCHMVLEEAPPPPQ---KQQHGETMYLLPLSAKEEN 239 E+T+ P G+SSFG SGTN H+VLEE + + +HG +++ LSA E Sbjct: 1060 EAAEFTSGDEPLRGGVSSFGFSGTNAHVVLEEYISQSEYAPEDEHGPHLFV--LSAHTEK 1117 Query: 240 VLRELAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQLERLTEKQ 299 L ELA Y + + SQ L+ +CYTASTGR H +H +A++ +G Q+L ++L RL + Sbjct: 1118 SLYELAQQYRQYVSDDSQASLKSICYTASTGRAHLDHGIAMIVSGKQELSDKLTRLIQGD 1177 Query: 300 ALTPTLQSA-QQLKGM--EHSEKENSYRA-------------------IAELYVSGGTID 337 P + + +K M H E+ N A AEL+V G ID Sbjct: 1178 RNLPGVYIGYKNMKEMLPAHKEELNQQAAALIKQRLRTQDERITWLHRAAELFVQGAVID 1237 Query: 338 WEDMYKGKACNRLSLPVYPFQKTRCWLKPEA---QAEPKRSASGGNVHPLLAHVAGETPE 394 W +Y G+ + LP+YPF+++RCW + + + KR + N++ AH+ Sbjct: 1238 WRALYSGETVQKTPLPLYPFERSRCWAEADQLRLNEDEKRGEAALNINQSKAHIESFLKT 1297 Query: 395 QVTYAVRMSAKEDWMLNEHKVG 416 ++ A + A E+ LN H +G Sbjct: 1298 VISNASGIRA-EELDLNAHFIG 1318 >emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] Length = 3982 Score = 351 bits (901), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 196/442 (44%), Positives = 268/442 (60%), Gaps = 31/442 (7%) Query: 3 IGIESSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSI 62 + +ESSD TKTF S+GTG GEGA AVLLKPL+ A++D DHI+ VIKGSA+NQDG + Sbjct: 880 LDMESSDGYTKTFSKDSDGTGTGEGAAAVLLKPLQDAVRDGDHIYGVIKGSAMNQDGTTA 939 Query: 63 GITAPDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKK 122 GITAP+P AQ EV+ AW++AGI PE LS+IEAHGTGT+LGDP+E G+ +AF +YT KK Sbjct: 940 GITAPNPAAQTEVIETAWKDAGIAPETLSFIEAHGTGTKLGDPVEFNGLCKAFEKYTAKK 999 Query: 123 QFCAIGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVND 182 QFCAIGS+K+NIGHL AAGI GL+K + L KK P HF +PN I+F +S YVN Sbjct: 1000 QFCAIGSVKSNIGHLFEAAGIVGLIKSVLMLNHKKNPPLAHFNEPNPLIHFHSSPFYVNQ 1059 Query: 183 RLQEWTTPGVPRLAGISSFGLSGTNCHMVLEEAPPPPQ---KQQHGETMYLLPLSAKEEN 239 E+T+ P G+SSFG SGTN H+VLEE + + +HG +++ LSA E Sbjct: 1060 EAAEFTSGDEPLRGGVSSFGFSGTNAHVVLEEYISQSEYAPEDEHGPHLFV--LSAHTEK 1117 Query: 240 VLRELAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQLERLTEKQ 299 L ELA Y + + SQ L+ +CYTASTGR H +H +A++ +G Q+L ++L RL + Sbjct: 1118 SLYELAQQYRQYVSDDSQASLKSICYTASTGRAHLDHGIAMIVSGKQELSDKLTRLIQGD 1177 Query: 300 ALTPTLQSA-QQLKGM--EHSEKENSYRA-------------------IAELYVSGGTID 337 P + + +K M H E+ N A AEL+V G ID Sbjct: 1178 RNLPGVYIGYKNMKEMLPAHKEELNQQAAALIKQRLRTQDERITWLNRAAELFVQGAVID 1237 Query: 338 WEDMYKGKACNRLSLPVYPFQKTRCWLKPEAQAEPKRSASGG---NVHPLLAHVAGETPE 394 W +Y G+ + LP+YPF+++RCW + + + GG N++ AH+ Sbjct: 1238 WRALYSGETVQKTPLPLYPFERSRCWAEADQLRLNEGEKKGGAALNINQSKAHIESFLKT 1297 Query: 395 QVTYAVRMSAKEDWMLNEHKVG 416 ++ A + A E+ LN H +G Sbjct: 1298 VISNASGIRA-EELDLNAHFIG 1318 >pir||T44806 mycosubtilin synthetase chain mycA [imported] - Bacillus subtilis gb|AAF08795.1| MycA [Bacillus subtilis] Length = 3971 Score = 350 bits (897), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 185/403 (45%), Positives = 248/403 (61%), Gaps = 25/403 (6%) Query: 1 LKIGI--ESSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQD 58 ++IG+ ESSD TKTF S+GTG GEG AVLLKPL+ A++D DHI+ VIKGSAINQD Sbjct: 877 MRIGLDMESSDGLTKTFSKDSDGTGSGEGVAAVLLKPLQAAIRDGDHIYGVIKGSAINQD 936 Query: 59 GNSIGITAPDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRY 118 G ++GITAP P AQ EV+ AW++AGI PE LS+IEAHGTGT+LGDP+E G+ +AF + Sbjct: 937 GTTVGITAPSPAAQTEVIEMAWKDAGIAPETLSFIEAHGTGTKLGDPVEFNGLCKAFEKV 996 Query: 119 TQKKQFCAIGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAV 178 T+KKQFCAIGS+K NIGHL AAGI GL+K L KK+ P HF KPN I F +S Sbjct: 997 TEKKQFCAIGSVKANIGHLFEAAGIVGLIKSALMLNHKKIPPLAHFNKPNPLIPFHSSPF 1056 Query: 179 YVNDRLQEWTTPGVPRLAGISSFGLSGTNCHMVLEEAPPPPQ-KQQHGETMYLLPLSAKE 237 YVN + ++T P GISSFG SGTN H+VLEE P + + G +L LSA Sbjct: 1057 YVNQEVMDFTPEDRPLRGGISSFGFSGTNAHVVLEEYTPESEYAPEDGNDPHLFVLSAHT 1116 Query: 238 ENVLRELAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQLERLTE 297 E L EL Y + + SQ L +CYTASTGR H ++ LA++ + Q+L+++L L + Sbjct: 1117 EASLYELTHQYRQYISDDSQSSLRSICYTASTGRAHLDYCLAMIVSSNQELIDKLTSLIQ 1176 Query: 298 KQALTPTLQSA-QQLKGMEHSEKENSYRA---------------------IAELYVSGGT 335 + P + + +K M+ +EK+N + IAELYV Sbjct: 1177 GERNLPQVHFGYKNIKEMQPAEKDNLSKQISDLMQHRPCTKDERITWLNRIAELYVQRAV 1236 Query: 336 IDWEDMYKGKACNRLSLPVYPFQKTRCWLKPEAQAEPKRSASG 378 IDW +Y + + LP+YPF++ RCW++ ++ +R G Sbjct: 1237 IDWRAVYSNEVVQKTPLPLYPFERNRCWVEAVYESAKERKEKG 1279 >emb|CAB13603.2| polyketide synthase [Bacillus subtilis subsp. subtilis str. 168] Length = 4262 Score = 309 bits (792), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 191/535 (35%), Positives = 286/535 (53%), Gaps = 47/535 (8%) Query: 3 IGIESSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSI 62 +G+ SSD TF +G GEG G VLLKPL+KA QD D I+AVIKGSAIN G Sbjct: 611 VGMHSSDGYCHTFGKGGDGYVSGEGVGTVLLKPLRKAEQDGDRIYAVIKGSAINHVGKVS 670 Query: 63 GITAPDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKK 122 GIT P P AQ +V+ E+ GI+P +SY+EAHGTGT LGDPIE++G+ +AFSR TQ K Sbjct: 671 GITVPSPVAQADVIEACLEKTGIDPRTISYVEAHGTGTSLGDPIEVQGLVKAFSRNTQDK 730 Query: 123 QFCAIGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVND 182 QFC+IGS+K+NIGH + AAGI+GL K + L K L PSLH + N + + +V Sbjct: 731 QFCSIGSVKSNIGHAEAAAGISGLTKTVLQLHHKTLVPSLHSEELNPYLKLDQTPFFVQH 790 Query: 183 RLQEWTTPGV---------PRLAGISSFGLSGTNCHMVLEEAPPPPQKQQHGETMY---- 229 +EW P PR AG+SSFG SG+N H++LEE P + H ET+ Sbjct: 791 ETKEWEQPSFTENGVDVTYPRRAGLSSFGASGSNAHLILEEYIPA---ESHSETILTKNE 847 Query: 230 --LLPLSAKEENVLRELAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLAIVFTGYQD 287 ++PLSA+ ++ L+ A + L S ++L L YT GR R A + +D Sbjct: 848 EIVIPLSARNKDRLQAYALKLLDFL--SEDVNLLALAYTMQAGRVEMEERAAFIVKDIKD 905 Query: 288 LLNQLERLTEKQ-----ALTPTLQSAQQLKGMEHSE-------KENSYRAIAELYVSGGT 335 L +L + T + Q+ G+ +++ +A+ +V G Sbjct: 906 LTAKLRAFANGEEEIEGCWTGRAKENQEAAGLASVNALNNNLIRDSEMMEMAKAWVQGKR 965 Query: 336 IDWEDMYKGKACNRLSLPVYPFQKTRCWLKPEAQAEPKRSASGGNVHPLLAHVAGETPEQ 395 + W+D+Y + ++S+P YPF + R W+ + E K S +HPL+ + EQ Sbjct: 966 VTWDDLYGDRKPLKISVPTYPFARERYWI---SVPEMKTSTVNHILHPLVHRNTSDFTEQ 1022 Query: 396 VTYAVRMSAKEDWMLNEHKVGSEYVLPGTAYVELLLEIGRQQGG------RSV-IKDLAF 448 +V ++ L++H V + +LPG AY+E+ E + G R V +KD+ + Sbjct: 1023 RFSSVFTGT--EFFLSDHVVQGQKILPGVAYLEMAREAAEKAAGDLDGEQRVVSLKDIVW 1080 Query: 449 LQPFSVQEGETRELQITL-KKGNGDNGF-IITSKDYADGTWRRHAEGKLCLPSQA 501 ++P ++ E E +E+ I L + NGD F I +S ++ + H +G+ + +A Sbjct: 1081 VRPITI-ESEPKEIHIGLFPEDNGDISFDIYSSSEHKEEALTIHCQGRAVISDEA 1134 Score = 270 bits (690), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 158/386 (40%), Positives = 218/386 (56%), Gaps = 22/386 (5%) Query: 7 SSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSIGITA 66 S+ + K+F D ++G GEG GA++LKPL++A+ D DHI+ VIK SAIN G + G T Sbjct: 2522 SASDTCKSFGDDADGFVDGEGVGAIVLKPLQQAIADGDHIYGVIKASAINSGGKTNGYTV 2581 Query: 67 PDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKKQFCA 126 P+P AQ +V+ +A E A I +SY+EAHGTGT LGDPIEI G+ +AF + TQ+KQFCA Sbjct: 2582 PNPHAQAQVIKEAIERADIPARTISYLEAHGTGTALGDPIEIAGLTKAFEKDTQEKQFCA 2641 Query: 127 IGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVNDRLQE 186 IGS K+NIGH + AAGIAGL K+++ K ++ PSLH + N I FS + V +L E Sbjct: 2642 IGSSKSNIGHCESAAGIAGLTKILFQFKYGQIAPSLHAQRLNPNIEFSHTPFVVQQQLGE 2701 Query: 187 WTTP-----GVPRLAGISSFGLSGTNCHMVLEEAPPPPQKQQ-HGETMYLLPLSAKEENV 240 W P VPR AG+SSFG G+N H++LEE P Q L+ LSAK Sbjct: 2702 WKRPVIGGQEVPRRAGLSSFGAGGSNAHIILEEYIPRTGAQTPKDHPPALIVLSAKNMER 2761 Query: 241 LRELAAAYIRLLEGS--SQIDLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQLERLTEK 298 L+E A + ++ + DL + YT TGR RLA + +DL +L E Sbjct: 2762 LQEKAEQLLTAIKQKRYCETDLIRIAYTLQTGREAMEERLAFIAESLEDLERKLNDFIEN 2821 Query: 299 QALTPTL-------QSAQQLKGMEHSEK-------ENSYRAIAELYVSGGTIDWEDMYKG 344 +A + L ++ L E +EK + Y + +L+V G + DW +Y Sbjct: 2822 KADSLYLDRIDDNKKALAVLSADEDTEKIIEAWMSKGKYTKLLDLWVKGLSFDWGMLYGT 2881 Query: 345 KACNRLSLPVYPFQKTRCWLKPEAQA 370 + R+SLP YPF K R W A+A Sbjct: 2882 QTPVRISLPAYPFAKERYWAPGAAKA 2907 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 133/380 (35%), Positives = 203/380 (53%), Gaps = 17/380 (4%) Query: 7 SSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSIGITA 66 S + + K FD +NG GE AVLLKPL KA++D+DHI+ IK S +N DG + GITA Sbjct: 3736 SPNGQCKVFDQDANGLVPGEAVAAVLLKPLSKAIEDKDHIYGCIKASGVNYDGKTNGITA 3795 Query: 67 PDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKKQFCA 126 P+P +Q E++ +E+ INP ++ Y+ AH TG+ LGDP+E++ + FS+YT++KQFC Sbjct: 3796 PNPFSQAELIENIYEKNEINPLDIQYVMAHSTGSNLGDPLEVQALTSVFSKYTKQKQFCM 3855 Query: 127 IGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVNDRLQE 186 I S+K IGH A+G L+ ++ ++K++ + + H N I F S + + Sbjct: 3856 ISSIKPLIGHTFAASGTVALISMLMAMKNQIIPATHHCESENPYIPFKESPFVLCKENRS 3915 Query: 187 WTTPG-VPRLAGISSFGLSGTNCHMVLEEAPPP--PQKQQHGETMYLLPLSAKEENVLRE 243 W PR+ IS+ G+SGTN H V+EE P P Q+H + + +SA+ ++ L++ Sbjct: 3916 WIKKNQKPRMGTISTTGISGTNAHAVIEEYIPDDQPSTQRHQGSPQIFVISAQNDDRLQD 3975 Query: 244 LAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQLERLTEKQ---- 299 A I LE + + L D+ YT GR+ RLAIV + L+ +L+ E Sbjct: 3976 AACRMIAYLEQNHNLSLPDVAYTLQVGRKAMEARLAIVANNQEQLVRKLKEYVEAMKNGG 4035 Query: 300 ----------ALTPTLQSAQQLKGMEHSEKENSYRAIAELYVSGGTIDWEDMYKGKACNR 349 T + Q ++ KE + IAE +V G I WE ++ G Sbjct: 4036 VSGQQRSLYTGYTEGILEEQDEAVLQALAKERNLENIAECWVKGYQIPWELLHDGDDVRM 4095 Query: 350 LSLPVYPFQKTRCWLKPEAQ 369 +SLP YPF + R W+ Q Sbjct: 4096 VSLPGYPFARERYWISSGTQ 4115 >ref|NP_389600.1| polyketide synthase of type I [Bacillus subtilis] sp|Q05470|PKSL_BACSU Putative polyketide synthase pksL (PKS) pir||PN0637 polyketide synthase pksL - Bacillus subtilis emb|CAA78479.1| Hypothetical polyketide synthase [Bacillus subtilis] gb|AAA85145.1| polyketide synthase Length = 4427 Score = 303 bits (775), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 182/501 (36%), Positives = 277/501 (55%), Gaps = 36/501 (7%) Query: 7 SSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSIGITA 66 S+D +TF +G EG GAVLLKPL++A +D D I+AVIKGSA+N G GI+ Sbjct: 544 STDGHCRTFGKDGDGYVPAEGIGAVLLKPLRQAEEDGDRIYAVIKGSAVNHVGTVSGISV 603 Query: 67 PDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKKQFCA 126 P P +Q +++ E+ GI+P +SY+EAHGTGT LGDPIEI+G+ +AF +YTQ +QFC+ Sbjct: 604 PSPVSQADLIETCLEKTGIDPRTISYVEAHGTGTSLGDPIEIQGLVKAFRQYTQDRQFCS 663 Query: 127 IGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVNDRLQE 186 IGS+K+NIGH + AAGI+GL KV L +KL PSLH + N ++F S YV + Sbjct: 664 IGSVKSNIGHAESAAGISGLSKVALQLHHQKLVPSLHSEELNPYVDFEKSPFYVQHETET 723 Query: 187 WTTPGV---------PRLAGISSFGLSGTNCHMVLEEAPPPPQKQQ-----HGETMYLLP 232 W P + PR AGISSFG +G+N H++LEE P +Q + ++P Sbjct: 724 WKQPVIKENGEDVPYPRRAGISSFGATGSNAHIILEEHIPQAAEQDVSLSSDSDISAVIP 783 Query: 233 LSAKEENVLRELAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQL 292 LSA+ + LR A + L QI DL YT GR R++ + +G Q+L +QL Sbjct: 784 LSARNQERLRVYAKRLLDFLHDGIQI--RDLAYTLQVGREPMEERVSFLASGIQELSDQL 841 Query: 293 ERLTEKQALTPTLQSAQQLKGMEHSEKENSYRA---------IAELYVSGGTIDWEDMYK 343 + E + + +G E S S IAE + +G +DW+ +Y+ Sbjct: 842 KAFIEGRKAIQHCWKGRVSRGSEPSRPAESVHKLLEQRKLDQIAEQWANGSGVDWKLLYE 901 Query: 344 GKACNRLSLPVYPFQKTRCWLKPEAQAEPKRSASGGNV-HPLLAHVAGETPEQVTYAVRM 402 G R+SLP YPF++ R W+ P+A+ + RS ++ HPLL H V + Sbjct: 902 GSKPKRISLPTYPFERVRYWV-PKAEKKTDRSKQERHILHPLL-HQNVSDISGVRFRSAF 959 Query: 403 SAKEDWMLNEHKVGSEYVLPGTAYVELLLEIGRQQGGRSV-----IKDLAFLQPFSVQEG 457 + +E + L +H + E+VLPG A +E++ + ++++ +++PF+V E Sbjct: 960 TGRE-FFLKDHVIKGEHVLPGAALLEMVRAAVERAAADQFPTGFRLRNIVWVRPFAVTE- 1017 Query: 458 ETRELQITL-KKGNGDNGFII 477 + +++ + L + NG+ F I Sbjct: 1018 QQKDIDVRLYPEENGEITFEI 1038 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 164/395 (41%), Positives = 229/395 (57%), Gaps = 23/395 (5%) Query: 4 GIESSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSIG 63 G+ S D + K FD+ +NG GEGAGA++LK LK A DRDHI+ +I GS INQDG + G Sbjct: 2972 GMLSPDGQCKAFDNGANGFVPGEGAGALVLKRLKDAEADRDHIYGIIIGSGINQDGKTNG 3031 Query: 64 ITAPDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKKQ 123 ITAP ++Q ++ +E GI+PE++SY+E HGTGT+ GDPIE+E + F T KKQ Sbjct: 3032 ITAPSAKSQMDLERDIYETYGIHPESISYVEMHGTGTKQGDPIELEALSTVFQEKTDKKQ 3091 Query: 124 FCAIGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVNDR 183 FCAIGS+K+NIGH AAG+AG+ KV+ + K L P+L+F PN+ F S +YVN Sbjct: 3092 FCAIGSVKSNIGHTSAAAGVAGVQKVLLCMNHKTLVPTLNFTTPNEHFEFEHSPLYVNTE 3151 Query: 184 LQEW-TTPGVPRLAGISSFGLSGTNCHMVLEEAPPPPQK----QQHGETMYLLPLSAKEE 238 L+ W T G PR A +SSFG SGTN H+V+EE P + +QH +++ LSAK+E Sbjct: 3152 LKPWETADGKPRRACVSSFGYSGTNAHIVIEEYQPEKRNDRLTKQHRSALFV--LSAKKE 3209 Query: 239 NVLRELAAAYIRLLEGSSQIDLEDLCYTASTGRRHYNHRLA-------IVFTGYQDLLNQ 291 L+ A A + + IDLED+ YT TGR ++R+A ++ D L + Sbjct: 3210 KQLKAYAEAMKDFVTSNEDIDLEDMAYTLQTGREAMDYRMAFLADSREMLIKALDDYLAE 3269 Query: 292 LERLTEKQALTPTLQSAQQLKGMEHSEK--------ENSYRAIAELYVSGGTIDWEDMYK 343 + + A T +S +L +H K + +AEL+V G IDW +Y Sbjct: 3270 MPNASIFAAHVKTKKSEIKLFETDHDAKALLQTWIEKKRLEKVAELWVKGLQIDWNKLYG 3329 Query: 344 GKACNRLSLPVYPFQKTRCWLKPEAQAEPKRSASG 378 R+SLP YPF + WL P + EP+ A+ Sbjct: 3330 EYTPRRISLPAYPFAEEYYWL-PTQEGEPETIATA 3363 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 153/398 (38%), Positives = 223/398 (56%), Gaps = 29/398 (7%) Query: 7 SSDEKTKTFDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSIGITA 66 SS + ++F +G GEG GAVLLKPL KA++D DHI+ +IKG+AIN G + G + Sbjct: 2038 SSKGRCESFGQGGDGYVPGEGVGAVLLKPLSKAVEDGDHIYGIIKGTAINHGGKTNGYSV 2097 Query: 67 PDPQAQEEVLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKKQFCA 126 P+P AQ +V+ +A+ EA ++P +SYIEAHGTGT LGDPIEI G+ + F++ T KQFCA Sbjct: 2098 PNPNAQADVIKKAFVEAKVDPRTVSYIEAHGTGTSLGDPIEITGLSKVFTQETDDKQFCA 2157 Query: 127 IGSMKTNIGHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVNDRLQE 186 IGS K+NIGH + AAGIAG+ KV+ +K + + PSLH N I+F S V L+E Sbjct: 2158 IGSAKSNIGHCESAAGIAGVTKVLLQMKYRHVAPSLHSNVLNPNIDFLNSPFKVQQELEE 2217 Query: 187 WTTPGV---------PRLAGISSFGLSGTNCHMVLEEAPPPPQKQQ--HGETMYLLPLSA 235 W P + PR+AG+SSFG G N H+++EE P P +++ + ++ LSA Sbjct: 2218 WKRPIISVNGKDIELPRIAGVSSFGAGGVNAHILIEEYAPEPVEERLPARKQPAVIVLSA 2277 Query: 236 KEENVLRELAAAYIRLLEGSSQI--DLEDLCYTASTGRRHYNHRLAIVFTGYQDLLNQLE 293 K E L++ + + + + DL + YT GR RLA V Q+L +L Sbjct: 2278 KNEERLQKRPERLLHAIREQTYVEADLHRIAYTLQVGREAMKERLAFVAETMQELEEKLY 2337 Query: 294 RL----------------TEKQALTPTLQSAQQLKGMEHSEKENSYRAIAELYVSGGTID 337 + K+A+ K +E ++ Y + +L+V G ID Sbjct: 2338 ECISGTENREYVYRGQVKSNKEAIAAFAADEDMSKTIEAWLQKGKYAKVLDLWVRGLRID 2397 Query: 338 WEDMYKGKACNRLSLPVYPFQKTRCWLKPEAQAEPKRS 375 W +Y+ + R+SLP YPF + R W+ A+AE KR+ Sbjct: 2398 WSTLYQDQKPRRISLPAYPFARDRYWIDVNAKAEEKRT 2435 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 120/201 (59%), Gaps = 8/201 (3%) Query: 15 FDDSSNGTGKGEGAGAVLLKPLKKALQDRDHIHAVIKGSAINQDGNSIGITAPDPQAQEE 74 FD ++G GEG G VL+K + +A++D D I+AVIK +AIN DG + G ++P+ +AQ++ Sbjct: 4179 FDKRADGVILGEGVGMVLVKTVNQAVEDGDSIYAVIKAAAINNDGRTAGPSSPNLEAQKD 4238 Query: 75 VLCQAWEEAGINPENLSYIEAHGTGTRLGDPIEIEGIDRAFSRYTQKKQFCAIGSMKTNI 134 V+ A E++G E +SY+EA+G+G+ + D +E++ I + ++ K +GS+K NI Sbjct: 4239 VMLSALEKSGKKTEEISYLEANGSGSAVTDLLELKAIQSIYR--SESKAPLGLGSVKPNI 4296 Query: 135 GHLDHAAGIAGLVKVIYSLKSKKLFPSLHFMKPNQTINFSTSAVYVNDRLQEW--TTPGV 192 GH A GIA L+KV LK ++L P L + + + +Y + EW TTP Sbjct: 4297 GHPLCAEGIASLIKVALMLKHRQLVPFLSGNENMPYFDIEKTDLYFSRSQAEWKETTPA- 4355 Query: 193 PRLAGISSFGLSGTNCHMVLE 213 A I+ F GTN H+++E Sbjct: 4356 ---AAINCFADGGTNAHLIIE 4373 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.314 0.133 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 810,789,680 Number of extensions: 34963643 Number of successful extensions: 68124 Number of sequences better than 1.0e-05: 1573 Number of HSP's gapped: 65679 Number of HSP's successfully gapped: 2137 Length of query: 510 Length of database: 757,237,578 Length adjustment: 130 Effective length of query: 380 Effective length of database: 404,274,708 Effective search space: 153624389040 Effective search space used: 153624389040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 128 (53.9 bits)