BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0489.0007.p (905 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAD89775.1| MelD protein [Melittangium lichenicola] 223 2e-56 gb|AAK57187.1| MxaC [Stigmatella aurantiaca] 219 3e-55 ref|ZP_00110107.1| COG3321: Polyketide synthase modules and rela... 208 6e-52 ref|NP_929148.1| hypothetical protein [Photorhabdus luminescens ... 206 3e-51 gb|AAR87760.1| putative peptide synthetase/polyketide synthase [... 202 3e-50 >emb|CAD89775.1| MelD protein [Melittangium lichenicola] Length = 3284 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 229/951 (24%), Positives = 402/951 (42%), Gaps = 83/951 (8%) Query: 1 VAEHKIMDHYVLPGTAYLELAAQILKQTVPEQGELIMENFMFLQPLQMKEHEQKSVHIVL 60 +A+H++ VLP T Y+E+ ++ + E G +E+ + + L +++ + ++ +VL Sbjct: 2368 LADHQVHGATVLPSTVYMEVVRAAARELLGE-GAHALEDVLIQEVLVLRDDAEHTLQLVL 2426 Query: 61 TKQKSGT-DVMVTSLSGELPDE----WVVHCKGKVSILHREEPKRRIALPEVLQESKRQS 115 + + T + S +L + WV+H G + + R P P+VL+ + Sbjct: 2427 SPRGDDTRSFQLFSARADLAESSNEPWVLHATGTLRVAPRGAPAPEPVSPDVLRSRCARD 2486 Query: 116 VAGYKPGA---EAPVQTGPHWECMKEIYVEPDRIXXXXXXXXXXXXXXXXXTMHPSLLDC 172 V A + GP ++ ++ I++ +HP+LLD Sbjct: 2487 VPAATLRAHFQSLGIHYGPGFQGIERIHLGSGEALGWVQLPEALASESAHFPLHPALLDA 2546 Query: 173 AVNIPISQI--------RDGLFLPFAYKRIKFYGSMPHRFYSMLQMKNNQTTELQETVSF 224 + + + + D L+LP +KR++F+ + +S + M+ + + ++ Sbjct: 2547 CLQVCGATLLGDGTKAPEDTLYLPVGFKRLQFWRAAGAACWSHVSMRPRDPSA-EGVLTA 2605 Query: 225 DIVLFDEAGEVFAEIEEYSLKRVHIEAFSSAPVLPKGMFHRLGWERSPLHRREQANASMP 284 D+ L D +G V A +E +RV A H + WE P H Sbjct: 2606 DVRLLDASGVVCAVVEGLRFQRVGNSALQRLLRSGSQWTHEVRWEAQP-HDAGTEAVLEG 2664 Query: 285 LTLVFAGQDPLSHRLLAALQERDMPFISVVMGERFNKQDDHHYRISGSQ-QDFDRLCGEI 343 LV A L+ +L+ R + + G + D + + S+ +DF RL + Sbjct: 2665 TWLVLADATGTGDALVRSLRGRGVRCVVARPGAAYAAHDGQTFTLDPSRMEDFSRLLRDA 2724 Query: 344 QTRGV---QRILHCFSWSHGPSLPGS--DVEQEMNKGLFSLFYLTKSLIAQNIREKIDLV 398 G + I+H W P P + + + G S+ +LT++L+ + + Sbjct: 2725 SAPGTPPCRGIVHL--WGLEPDAPVTLASLREAQRLGCESVLHLTQALVRGEFPVRPRMF 2782 Query: 399 LIADLAYQVTRNEPSLNPM-HSAFYHLGKVVSSEYAHLRCRCIDLD---PETEVTALLAE 454 L+ Q T EP+ + SA + LG+ ++ E+ +DLD P TE +L+AE Sbjct: 2783 LVTR-GTQRTGQEPTPPALAQSALWGLGRTLALEHPEFSPALVDLDSRAPSTEDASLIAE 2841 Query: 455 LDNLPDHYVTAYRKGERYGQRMMELPLSNPLPQELILSDSGCYLIXXXXXXXXXXXXXXX 514 L ++P AYR+G+RY R+ S+ L G YLI Sbjct: 2842 LLHVPRGEQVAYRQGQRYVARLARYAGSDARSAASRLRPDGAYLITGGLGGLGLQVARWM 2901 Query: 515 XXKKPVNLALVSRSGFPDEAEWEDILQKGEAQEVIRRIKILQQIQENGSTYTFYRADISR 574 + +L L+ R + GEA + + L+ +++ G+ T D+S+ Sbjct: 2902 VERGARHLVLMGRK------------EPGEAAK-----ESLRALRQAGAEVTLASGDVSQ 2944 Query: 575 RTELENVLQDVRSRFGSINGVVHAAGVAGDQFLFNREEQRFREVIQPKIAGSIYLAELIT 634 ++ VL + ++ GV+H AGV D L ++ RF V+ PK AG L E Sbjct: 2945 PGDVARVLASLAQTKTALRGVMHLAGVVDDGTLLHQNASRFERVLAPKQAGGWNLHEQTR 3004 Query: 635 E-PLEFFVCYSSVSSLEGTPGQGDYVAANGFLDSFVYSLPA-NQNGITLNWAPWKEIGMA 692 L+ FV +SS +SL G GQG+Y AAN FLD+ + A +++NW W GMA Sbjct: 3005 GMDLDLFVLFSSSASLLGAAGQGNYAAANAFLDALAHHRRALGLKAVSINWGAWSGHGMA 3064 Query: 693 YDYETFNQELIFNLLPTGVAMSAFDAALASGEKQVVIGTINKENAVKNFRSSFFYEGNNL 752 + + Q+ + + A A+ G V + ++ V+ F SS N Sbjct: 3065 AAFASPEQQRGSEWIDPERGLEALGQAMEEGPAAVAVLPVDWNQYVQRFASS-----ANF 3119 Query: 753 LMNYVEPQLVAQTSLSATAS-----AGLPEGRTHNRSLQSIKELIRQ-LWVTLLESESIA 806 L +EP V T S A+ GLP GR L + + + Q L V+L S+++A Sbjct: 3120 LRKLIEPGRVG-TPGSREATLVDRLKGLPRGRQQEVLLDHVHQQVHQVLGVSL--SKALA 3176 Query: 807 LDDAFTSIGGNSIFAVYLLQELEKAFPGMLGISD------IFTYPTINKMAEYVYSR--- 857 +D G +S+ A+ EL F LG+ +F +PTI+ + ++ + Sbjct: 3177 GNDRLFDAGMDSLMAI----ELRGRFQSSLGVERTLAATLVFDHPTIDALTHHLATEILG 3232 Query: 858 MEQAQPSSSAKANPSQEEED---HNLDQILHRLANGELD--VDEVEQLLGE 903 +E PSS E E NL+Q+ LD + ++E+L+G+ Sbjct: 3233 LEPLAPSSPGHVPDKAEAEGPSLENLEQLPQDELGALLDQKLADLEKLVGD 3283 >gb|AAK57187.1| MxaC [Stigmatella aurantiaca] Length = 5192 Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 223/916 (24%), Positives = 384/916 (41%), Gaps = 86/916 (9%) Query: 1 VAEHKIMDHYVLPGTAYLELAAQILKQTVPEQGELIMENFMFLQPLQMKEHEQKSVHIVL 60 +AEH++ LP A ++A KQT+ E + +E+ F L E E++ + + L Sbjct: 953 LAEHRVQGVPALPAAAMADMALSAAKQTLGE--PVSLEDVSFSALLSFPEDEERVLQLWL 1010 Query: 61 TKQKSGTD--------VMVTSLSGELPDEWVVHCKGKV-----SILHREEPKRRIALPEV 107 + ++ G VM + S EL W +H +G + S++ + P +AL E+ Sbjct: 1011 STERPGASAFRLFSAPVMRETPSDEL--TWALHAEGSLRHGDASVVEKAAP---VALDEL 1065 Query: 108 LQESKRQSV--AGYKPGAEAPVQTGPHWECMKEIYVEPDRIXXXXXXXXXXXXXXXXXTM 165 ++ A Y+ E ++ GP + ++E+Y ++ Sbjct: 1066 RARCGEEASVEAHYQTLKEIGLEYGPSFRVVRELYRAKGEALGRVQLEGELTAEEERYSL 1125 Query: 166 HPSLLDCAVNIPISQIRD-----GLFLPFAYKRIKFYGSMPHRFYSMLQMKNNQTTELQE 220 HP+LLD + + + G+++P A R++ +S +++ + Sbjct: 1126 HPALLDGCFQVLAAALEGLDSEGGVYVPVALSRLRVLVRPEAALWSHVRIVSGAEAG-SN 1184 Query: 221 TVSFDIVLFDEAGEVFAEIEEYSLKRVHIEAFSSAPVLPKGMF-HRLGWERSPLHRREQA 279 T+ D+ L ++ G V AE+ K++ A +SAP + + WE P R+ +A Sbjct: 1185 TIECDVTLLNDQGRVVAEVRRLVCKKI---AAASAPADEVDRWIYSAQWE--PQQRQARA 1239 Query: 280 NASMPLT----LVFAGQDPLSHRLLAALQERDMPFISVVMGERFNKQDDHHYRISGSQ-Q 334 T LVFA + L + L ER + V G + + + YRI+ S+ + Sbjct: 1240 ETGSSRTAGRWLVFADARGIGQSLASGLAERAGGCVVVEAGPSYERLEADRYRINPSKLE 1299 Query: 335 DFDRLCGEI--QTRGVQRILHCFSWSHGPSLPGSD-VEQEMNKGLFSLFYLTKSLIAQNI 391 DF L E + ++H + ++ + E+ ++ S+ YL ++ + Sbjct: 1300 DFQALLKEAFSDQSPCKGMVHLYGLDVASNVTEPESFERALSLSSTSVVYLLQAWAQRGW 1359 Query: 392 REKIDLVLIADLAYQVTRNEPSLNPMHSAFYHLGKVVSSEYAHLRCRCIDLD----PETE 447 R+ L L+ + E +P + L V++ E+ LRC +DL PE E Sbjct: 1360 RDTPRLWLVTTGVQVIASGEQPGSPAAAPLVGLAAVITHEHPELRCAHVDLSAQPSPE-E 1418 Query: 448 VTALLAEL--DNLPDHYVTAYRKGERYGQRMMELPLSNPLPQELILSDSGCYLIXXXXXX 505 + +L EL D D A R R+ R+ + + G YLI Sbjct: 1419 IASLTEELLGDGAEDRI--ALRGAVRHVARLGRGISGRKAAEPREFTADGTYLITGGLGG 1476 Query: 506 XXXXXXXXXXXKKPVNLALVSRSGFPDEAEWEDILQKGEAQEVIRRIKILQQIQENGSTY 565 + NLAL R G P E EAQ K+L +++ NG+ Sbjct: 1477 LGLEVAKWFIQRGARNLALTGR-GAPSE----------EAQ------KVLGELRANGAEV 1519 Query: 566 TFYRADISRRTELENVLQDVRSRFGSINGVVHAAGVAGDQFLFNREEQRFREVIQPKIAG 625 YRAD++ ++ +L + S + GVVHAAGV D L +E R R V+ PK+ G Sbjct: 1520 RVYRADVTSAADVARLLGSIDSELPPLRGVVHAAGVIADGVLTQLDEPRLRAVLAPKVQG 1579 Query: 626 SIYL-AELITEPLEFFVCYSSVSSLEGTPGQGDYVAANGFLDSFV-YSLPANQNGITLNW 683 + L + PLE FV +SS +S+ G+PGQG+Y AAN F+D + A G+++NW Sbjct: 1580 AWNLHVQTQGRPLELFVMFSSAASMMGSPGQGNYAAANAFMDVLAHHRRAAGLPGLSVNW 1639 Query: 684 APWKEIGMAYDYETFNQELIF---NLLPTGVAMSAFDAALASGEKQVVIGTIN----KEN 736 PW ++G+A L +P A+ A L QV + ++ +E Sbjct: 1640 GPWADVGLAAVATNRGDRLALRGVGNMPPAQALEALGRLLVQEAAQVAVVPLDLRQWREF 1699 Query: 737 AVKNFRSSFFYEGNNLLMNYVEPQLVAQTSLSATASAGLPEGRTHNRSLQSIKELIRQLW 796 + +S F + L+ V + S +A PE R ++L R Sbjct: 1700 YLSAAQSPFL---SVLMQEKVSTPASRKGSARELLAAAEPEQRKGILEGYLREQLGR--- 1753 Query: 797 VTLLESESIALDDAFTSIGGNSIFAVYLLQELEKAFPGMLGISDIFTYPTINKMAEYVYS 856 + +E I D F +G +S+ + L +E L + I+ YPT+ + Y+Y Sbjct: 1754 ILRMEPSRIEPDQPFGDLGMDSLTGLELRNRIESGLKLTLSATLIYAYPTVQALTTYLYG 1813 Query: 857 RMEQAQPSSSAKANPS 872 ++E P A+A P+ Sbjct: 1814 KLE---PVLEAEARPT 1826 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 229/958 (23%), Positives = 389/958 (40%), Gaps = 143/958 (14%) Query: 3 EHKIMDHYVLPGTAYLELAAQILKQTVPEQGELIMENFMFLQPLQMKEHEQKSVHIVLTK 62 +H++ V+PG+ ++ Q+ G +E +F QP+ + + E++ V +VL Sbjct: 4294 DHRLYGTVVVPGSCHIARIIATAAQSF-GTGPYTIEKCLFSQPIVLADDEEQLVQLVLAP 4352 Query: 63 QKSGT-DVMVTSLSGELPDE---WVVHCKGKVSIL----HREEPKRRI---ALPEVLQES 111 + G D + SLS +E W+++ G + + R EP R A L ES Sbjct: 4353 KGQGRYDFEIYSLSPTADEETEGWLLNGTGTLQVGGDGHSRPEPISRQDIEARCTRLMES 4412 Query: 112 ---KRQSVAGYKPGAE----APVQTGPHWECMKEIYVEPDRIXXXXXXXXXXXXXXXXXT 164 ++ G+ G VQ+G E + ++ + +R Sbjct: 4413 GLYEKNWDIGFNLGHAFRWIERVQSGGR-EALCQMRLPTER-------------DDRGLY 4458 Query: 165 MHPSLLDCAVN-IPISQIRDG-----LFLPFAYKRIKFYGSMPHRFYSMLQMKNNQTTEL 218 +HP L+D + + IR+ +++P + +R +FY P ++ + + Sbjct: 4459 VHPGLVDSFLQAMGTDLIREDAQLSTVYVPISVERFRFY-EQPTGPVWAYAVRRDAEEAV 4517 Query: 219 QETVSFDIVLFDEAGEVFAEIEEYSLKRVHIEAFSSAPVLPKG---MFHRLGWERSPLHR 275 E ++ D+ + + G V EIE KR EA + VL G + LGW+R PL Sbjct: 4518 GEVITGDVYVVNAEGRVLIEIEGLKHKRAPREALMA--VLRHGQRDTLYELGWKRQPLPE 4575 Query: 276 REQANASMPLTLVFAGQDPLSHRLLAALQERDMPFISVVMGERFNKQDDHHYRISGSQ-Q 334 + +VFA + L L + + V GE F +QD + + + + Sbjct: 4576 GVPGSGRW---IVFADETGTGEALAERLLKSGCRPVLVRPGEAFARQDGDRFTLDAQRAE 4632 Query: 335 DFDRLCGEIQTRG--VQRILHCFSW--SHGPSLPGSDVEQEMNKGLFSLFYLTKSLIAQN 390 D+ RL E G + ++H ++ +HG + ++ G S +L K++ + Sbjct: 4633 DYARLLKEAVPSGESLGGVVHLWAMRGAHGNDVESLHAAHQLGGG--SALHLAKAVASFP 4690 Query: 391 IREKIDLVLIADLAYQVTRNEPSLNPMHSA--------FYHLGKVVSSEYAHLRCRCIDL 442 ++ + VTR +L P HS + LG V S E+ IDL Sbjct: 4691 SAARL---------WLVTRGARAL-PSHSGPLALNQVPVWGLGVVFSQEHPERCGALIDL 4740 Query: 443 DPET---EVTALLAELDNLPDHYVTAYRKGERYGQRMMELPLSNPLPQELILSDSGCYLI 499 DP + TA+ EL R+G+R+ R+ + + D+ YL+ Sbjct: 4741 DPSASGEDATAIWRELSAADGERQVVIREGQRHVARIRASRDEQRNAAQRLRPDA-SYLL 4799 Query: 500 XXXXXXXXXXXXXXXXXKKPVNLALVSRSGFPDEAEWEDILQKGEAQEVIRRIKILQQIQ 559 + NL L+ R K EAQE +R ++ Sbjct: 4800 TGGLGGLGLSLARWMVDQGARNLVLIGRGA-----------AKPEAQETLR------TLE 4842 Query: 560 ENGSTYTFYRADISRRTELENVLQDVRSRFGSINGVVHAAGVAGDQFLFNREEQRFREVI 619 G+ +AD+S++ ++ L++ + + GVVHAAGV D L ++ +RF V Sbjct: 4843 AAGAKVLVLQADVSKQADVRRTLEEA-EKLAPLRGVVHAAGVLDDGVLLQQDWERFSRVF 4901 Query: 620 QPKIAGSIYLAELITEP-LEFFVCYSSVSSLEGTPGQGDYVAANGFLDSFVY-----SLP 673 PK+ G+ +L EL + L+FFV YSS ++L G PGQG Y AAN FLD+ + LP Sbjct: 4902 APKVDGAWHLHELTKDKELDFFVLYSSAATLLGPPGQGSYAAANAFLDALAHHRRSQGLP 4961 Query: 674 ANQNGITLNWAPWKEIGMAYDYETFNQELIFNLLPTGVAMSAFDAALASGEKQVVIGTIN 733 A +++NW PW E+GMA + + Q A+ AF AL+ + Q+ + + Sbjct: 4962 A----LSINWGPWAEVGMAAQHASRFQTQGIEAFSPEAALKAFSQALSRAQPQLTLMQVQ 5017 Query: 734 KENAVKNFRSSFFYEGNNLLMNYVEPQLVAQTSLSATASAGLPEGRTHN-----RSLQSI 788 + + P ++A+ S A A PE H+ R L+S Sbjct: 5018 WSRYLAQYPRG------------AAPTVLAEVSGRAVAE---PEANGHSASEFRRRLESA 5062 Query: 789 KELIRQLWVTLLE--------------SESIALDDAFTSIGGNSIFAVYLLQELEKAFPG 834 + RQ LLE S S+ +G +S+ A+ L L+ Sbjct: 5063 EP--RQRLPLLLEHVQGEAVRVLGLDASASLEPRQRLFEVGMDSLMALELRNRLQTTVGA 5120 Query: 835 MLGISDIFTYPTINKMAEYVYSRMEQAQPSSSAKANPSQEEEDHNLDQILHRLANGEL 892 L + +F YPT +A Y+ + S+ N E +D L + + L+ EL Sbjct: 5121 SLPSTLVFDYPTAEAIANYLLGEALGLEKQSA--GNAQGEVQDTALLERIMELSPDEL 5176 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 149/632 (23%), Positives = 253/632 (40%), Gaps = 34/632 (5%) Query: 243 SLKRVHIEAFSSAPVLPKGMFHRLGW---ERSPLHRREQANASMPLTLVFAGQDPLSHRL 299 S + V A +S+ P + + W ER R Q L+ ++ L Sbjct: 2733 SARGVASGAPASSTSRPDDWVYDITWQARERGAASPRAQQGTGT--WLILGHREGTGAAL 2790 Query: 300 LAALQERDMPFISVVMGERFNKQDDHHYRISGSQQD-FDRLCGEIQTRGVQRILHCFSWS 358 A L++R P VV GE I + + F+RL E+ ++ ++H + Sbjct: 2791 AALLEQRGEPCWLVVPGEEAEVLGPTLRSIHPQRSEHFERLLQEVGP--IRAVVHLWGAD 2848 Query: 359 HGP-SLPG-SDVEQEMNKGLFSLFYLTKSLIAQNIREKIDLVLIADLAYQVTRNEPSLNP 416 P S P ++VE G+ ++ L ++ + L L Q +P Sbjct: 2849 ASPASEPKLAEVESAQQLGVHAVVRLVQAFLKSGSASGARLWLCTR-GSQAVGGAMGGSP 2907 Query: 417 MHSAFYHLGKVVSSEYAHLRCRCIDLDPET---EVTALLAELDNLPDHYVTAYRKGERYG 473 + + + LG+V++ EY +DLDP EV AL EL A+R G RY Sbjct: 2908 LQAPLWGLGRVMALEYPDAWGGLLDLDPSAPAGEVEALWKELSGFDGEDQAAFRDGVRYV 2967 Query: 474 QRMMELPLSNPLPQELILSDSGCYLIXXXXXXXXXXXXXXXXXKKPVNLALVSRSGFPDE 533 R++ L + D+ YL+ K +L L+ R G PD Sbjct: 2968 ARLVPAAPKPALAPVALRPDA-SYLVTGGLGGLGLHVARWLVSKGARHLVLLGRKGLPDR 3026 Query: 534 AEWEDILQKGEAQEVIRRIKILQQIQENGSTYTFYRADISRRTELENVLQDVRSRFGSIN 593 +EW I ++ +V R+I ++ ++ NG+ AD+ + V+Q ++ + Sbjct: 3027 SEWPTIARE---SDVGRQIAAVEALEANGAVVHALSADVGNPIRMAEVIQSIQQGPAPLK 3083 Query: 594 GVVHAAGVAGDQFLFNREEQRFREVIQPKIAGSIYLAELITE-PLEFFVCYSSVSSLEGT 652 G++HAAGV+ L +E +++PK+ G L ++ L+F V +SS S++ G+ Sbjct: 3084 GIIHAAGVSTLVSLDTMDEAALASILRPKVTGGWVLHQVTQGLDLDFTVYFSSGSAVWGS 3143 Query: 653 PGQGDYVAANGFLDSFV-YSLPANQNGITLNWAPWKEIGM-AYDYETFNQELIFNLLPTG 710 Y A N FLDS Y + +++NW PW GM A + + + + + Sbjct: 3144 ARMAHYAAGNQFLDSLAHYRRARGLHALSINWGPWAAEGMVAEEGLRWFERMGLRGVSVE 3203 Query: 711 VAMSAFDAALASGEKQVVIGTINKENAVKNFRSSFFYEGNNLLMNYVEPQLVAQTSLSAT 770 + +A LA Q + I+ F+S + L+ + P V Sbjct: 3204 GGLHVLEALLAMDVTQRSVAQIDW----SLFKSVYESRTRKPLLEALGPASVPVPRSVEV 3259 Query: 771 ASAGLPEGRTHNRSLQSIKELIRQLWV--------TLLESESIALDDAFTSIGGNSIFAV 822 A+ + N S KEL+ WV S S+ L+ F G +SI AV Sbjct: 3260 AAGNEELAQLRNASPARRKELV-IAWVREEVARVLGFPSSASVKLEQGFFETGMDSITAV 3318 Query: 823 YLLQELEKAFPGMLGISDIFTYPTINKMAEYV 854 L + L F L + F PT+ ++ ++ Sbjct: 3319 ELRRRLVARFGVQLATTVAFDRPTVLALSTHI 3350 >ref|ZP_00110107.1| COG3321: Polyketide synthase modules and related proteins [Nostoc punctiforme] Length = 1872 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 218/907 (24%), Positives = 387/907 (42%), Gaps = 73/907 (8%) Query: 1 VAEHKIMDHYVLPGTAYLELAAQILKQTVPEQGELIMENFMFLQPLQMKEHEQKSVHIVL 60 + +H + V+PG +L L K T G ++EN +F Q L + + +++ V + L Sbjct: 977 LGDHLVYSEVVVPGACHLSLLLAAAKSTFKNSG-CVLENVVFPQALAIAQDKERIVQLAL 1035 Query: 61 TKQKSGTDVMVTSLSGELPDEWVVHCKGKVSILHREEPKRRIALPEVLQESKRQ--SVAG 118 T + + S E D W VH GKV+ + + ++ EV R+ S+ Sbjct: 1036 TAENVDFAFKLISFEEEEADNWAVHATGKVTTAYGK--PSTVSRSEVESRCTRELASIQL 1093 Query: 119 YKPGAEAPVQTGPHWECMKEIYVEPDRIXXXXXXXXXXXXXXXXXTMHPSLLDCAVNI-- 176 Y+ E + G + + I++ +R +HP+L+D + Sbjct: 1094 YEALRERNIDLGTSFRWLNSIHLG-EREALGCLKVPTTILDAAEYELHPTLIDSCFQLFF 1152 Query: 177 PISQIR-DGLFLPFAYKRIKFYGSMPHR--FYSMLQMKNNQTTELQETVSFDIVLFDEAG 233 I+ I + F+PF+ ++ +FY P + ++++ T + + D+ LFD+ G Sbjct: 1153 AITPIEGEETFIPFSLEKFQFY-QRPESELLWCHAKLRSLDTIQADRVIG-DLQLFDQTG 1210 Query: 234 EVFAEIEEYSLKRVHIEAFSSAPVLPKGMFHRLGWERSPLHRREQANASMPL------TL 287 ++ AE+ + ++ + +A VL W +H + Q + +P L Sbjct: 1211 QLIAEVTGFEGRKANRQA-----VLRNFQAETGNWLYQ-VHWQPQQLSILPTHPQSGSWL 1264 Query: 288 VFAGQDPLSHRLLAALQERDMPFISVVMGERFNKQDDHHYRISGSQ-QDF-----DRLCG 341 +FA +L L++R I +G + + + Y+++ +Q +DF D L Sbjct: 1265 LFAHDYEQGLQLAQQLRDRSQHCIIATVGTSYKQLNQETYQVNPTQPEDFQQLLEDSLSQ 1324 Query: 342 EIQTRGVQRILHCFSWSHGPSLPGSDVEQEMNKGLFSLFYLTKSLIAQNIREKIDLVLIA 401 + RGV L + SL + + + S +L ++++ E ++ Sbjct: 1325 QPPLRGV-VYLEASAIPEDVSL--NALREAQTVSYASALHLVQAVVQTPGLEAPRFWIVT 1381 Query: 402 DLAYQVTRNEPSLNPMHSAFYHLGKVVSSEYAHLRCRCIDL--DPETEVTALLAELDNLP 459 V++N L +A + LG+V++ E+ L C C+DL + E ++ LL+EL + Sbjct: 1382 RGTQAVSKNPVPLQVSQAALWGLGRVINHEHPELSCTCVDLAANAEADMEILLSELSSPD 1441 Query: 460 DHYVTAYRKGERYGQRMMELPLSNPLPQELILSDSGCYLIXXXXXXXXXXXXXXXXXKKP 519 +Y +G R+ R+ E ++ ++ G YLI + Sbjct: 1442 SENQISYHQGVRHVARL-ERYRGRSQNKDFKVAKDGSYLITGGLGALGLESAEWLVEQGA 1500 Query: 520 VNLALVSRSGFPDEAEWEDILQKGEAQEVIRRIKILQQIQENGSTYTFYRADISRRTELE 579 +L LV R+ AQ+ I Q++ G+ ADIS Sbjct: 1501 QHLILVGRNQ-----------PSATAQDTIT------QLENAGAQVLVVTADISDAAAAT 1543 Query: 580 NVLQDVRSRFGSINGVVHAAGVAGDQFLFNREEQRFREVIQPKIAGSIYLAELITE-PLE 638 V + +RS + GV+H+AGV D L +RF V++PK+AG+ L L + L+ Sbjct: 1544 GVFEFIRSSLPPLRGVIHSAGVVDDGALRQLSWERFNRVLEPKVAGAWNLHCLTQDLTLD 1603 Query: 639 FFVCYSSVSSLEGTPGQGDYVAANGFLDSFVYSLPANQ-NGITLNWAPWKEIGMAYDYET 697 FFVCYSS++SL GTPGQG Y AN F+D+ V A+ G+++NW PW E+GMA E Sbjct: 1604 FFVCYSSIASLIGTPGQGSYAVANAFMDALVCDRQAHGLPGLSINWGPWAEVGMAARLEN 1663 Query: 698 FNQELIFNLLPTGV----AMSAFDAALASGEKQVVIGTINKENAVKNFRSSF-----FYE 748 +Q I +G+ L QV + IN + +SSF F+E Sbjct: 1664 RSQSKIVAQGISGITSEKGFQVLGELLGQAAYQVGVLPINWNQFFE--QSSFGIDEKFFE 1721 Query: 749 GNNLLMNYVEPQLVAQTSLSATASAGLPEGRTHNRSLQSIKELIRQLWVTLLESESIALD 808 + +P+ L +A + E R+L + + V L+ I Sbjct: 1722 AFTPKLE--QPEAEEFDVLQQLKAAPINE----QRALLTTHVCNQVAKVIALDPSQINPQ 1775 Query: 809 DAFTSIGGNSIFAVYLLQELEKAFPGMLGISDIFTYPTINKMAEYVYSRMEQAQPSSSAK 868 F +G +S+ +V L Q L+K+ + + +F YPTI Y+ ++ + + S+A Sbjct: 1776 QGFFDLGMDSLTSVELKQRLQKSLGCQIPDTFVFNYPTIEAAVNYIAEKVLETETPSAAT 1835 Query: 869 ANPSQEE 875 + S E Sbjct: 1836 ESASNNE 1842 >ref|NP_929148.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE14173.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 4160 Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 235/910 (25%), Positives = 378/910 (41%), Gaps = 150/910 (16%) Query: 1 VAEHKIMD-HYVLPGTAYLELAAQILKQTVPEQGELIMENFMFLQPLQMKEHEQKSVHIV 59 + EH+I + VLPGT LEL ++ + P G F PL + ++ + I Sbjct: 3066 IDEHRIFEGQGVLPGTGCLELVRRVFNELQP-GGTATFSEVYFPSPLVLSSGVERQIRIS 3124 Query: 60 LTKQKSGTDVMVTSLSGELPDEWVVHCKGKVS--------ILHREEPKRRIALPEVLQES 111 LT + + S + D W +H G V+ I+ E +R + L EV + Sbjct: 3125 LTAIDNSLAFTLES-HDDGNDMWQLHANGNVTAVCSPPAEIVSPYELRRNLQLEEVAEAP 3183 Query: 112 KR--QSVAGYKPGAEAPVQTGPHWECMKEIYVEPDRIXXXXXXXXXXXXXXXXXTMHPSL 169 +R Q+ A Y GP W+C+ +++ +HP+L Sbjct: 3184 ERFNQAFADY----------GPRWQCIAGVWMGDRCALAQLRLNQAFIDDLPDIALHPAL 3233 Query: 170 LDCAVNIPISQIRDG-LFLPFAYKRIKFYGSMPHRFYSMLQMKNNQTTELQETVSFDIVL 228 LD + + G +PF Y + + + FYS+ +T +DI L Sbjct: 3234 LDLGTVFLHACLLPGDASIPFHYGSLTLHQPLCAEFYSLAVETAPRT--------YDITL 3285 Query: 229 F--DE---AGEVFAEIEEYSLKRVHIEAFSSAPVLPKGMFHRLGWER------SPLHRRE 277 F DE +V AEI Y+L++ F+S P P + W R PL + Sbjct: 3286 FSWDERQNCKQVLAEIHGYNLRQ-----FNSLPFQPASESNVARWCRYPRWLPKPLGEAK 3340 Query: 278 QANASMPLTLVFAGQDPLSHRLLAALQERDMP-FISVVMGERFNKQDDHHYRISGSQ-QD 335 Q A L+F Q L+ L + P I V + F +Q + + + Q +D Sbjct: 3341 QNRAPW---LIFGAQAAE----LSDLSQAAAPGSIVVEDADEFLQQSTYRFSLRKDQPED 3393 Query: 336 FDRLCGEIQTRGV--QRILHCFSWSHGPSLPGSDVEQEMNKGLFSLFYLTKSLIAQNIRE 393 + RL + + V +RI+ C++ + G S P + EQ L K+L + Sbjct: 3394 YQRLIDCLIQQQVLPERIIWCWT-AAGISQPEAAFEQ--------LAAAIKALTGHHRVF 3444 Query: 394 KIDLV---LIADLAYQVTRNEPSLNPMHSAFYHLGKVVSSEYAHLRCRCIDLDPETEVT- 449 I L+ L A + P+L L ++++EY R IDL+ +T T Sbjct: 3445 NITLISRGLQAAKVLEACNAAPALG--------LLGILAAEYPGCSARHIDLNDDTFATY 3496 Query: 450 -ALLAEL--DNLPDHYV-------TAYRKGERYGQRMMELPLSNPLPQELILSDSGCYLI 499 +L+AEL D P+ + ++GER Q EL + +P+ IL D G YLI Sbjct: 3497 QSLIAELYTDMQPEETTEGIPVTSISLKQGERELQTFTEL---DEIPRRQILRDGGVYLI 3553 Query: 500 XXXXXXXXXXXXXXXXXK-KPVNLALVSRSGFPDEAEWEDILQKGEAQEVIRRIKILQQI 558 + V L ++SR G +E +L + Sbjct: 3554 TGGLGGIGQLLARHISNQCSKVKLGILSRRGTNAVSE-----------------ALLDVL 3596 Query: 559 QENGSTYTFYRADISRRTELENVLQDVRSRFGSINGVVHAAGVAGDQFLFNREEQRFREV 618 Q++G+ RAD++ L L +R+RFG+INGV+H+AG+ L + Q +R V Sbjct: 3597 QKSGAEVMMLRADVADDAALTKALAQMRARFGAINGVIHSAGIEASGLLEHGTSQDWRHV 3656 Query: 619 IQPKIAGSIYLAELIT-EPLEFFVCYSSVSSLEGTPGQGDYVAANGFLDSFVYSLPANQN 677 + K++G+ L I+ +PL+F + SS++SL G GQ DY AAN +LD+ + Sbjct: 3657 MAAKVSGTQQLMTAISQDPLDFVLLCSSLASLVGGMGQADYAAANRYLDAVAHYWRQQAI 3716 Query: 678 GIT-LNWAPWKEIGMAYDYETFNQELIFNLLPTGVAMSAFDAALASGEKQVVIGTINKEN 736 +T +NW W E+GMA DY QE + L + FD A+A E Q+V +NK Sbjct: 3717 PVTSVNWDTWAEVGMAVDYAARRQESVIG-LSNQEGCAIFDLAIAGMEAQIV---VNKFP 3772 Query: 737 AVKNFRSSFFYEGNNLLMNYVEPQLVAQTSLSATASAGLPEGRTHNRSLQSIKELIRQLW 796 V Q LS + + PE E +RQLW Sbjct: 3773 PV---------------------QRTQLQDLSVISDSASPE------------EAVRQLW 3799 Query: 797 VTLLESESIALDDAFTSIGGNSIFAVYLLQELEKAFPGMLGISDIFTYPTINKMAEYVYS 856 LL E+I L+D F +GG+S+ A ++ L F L +++ PT+ ++ + Sbjct: 3800 YELLGEETIHLEDDFFELGGHSLLATQMISRLRDHFQHCLTLAEFLEQPTMARVVRSLSD 3859 Query: 857 RMEQAQPSSS 866 + + P ++ Sbjct: 3860 EKKSSVPENA 3869 >gb|AAR87760.1| putative peptide synthetase/polyketide synthase [Bacillus cereus] Length = 2562 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 169/622 (27%), Positives = 297/622 (47%), Gaps = 45/622 (7%) Query: 260 KGMFHRLGWERSPLHRREQANASMPLTLVFAGQDPLSHRLLAALQERDMPFISVVMGERF 319 K F+ WER L + L+F +RL+ L+ I V G F Sbjct: 1926 KDWFYLPSWERKTLKSIQIKKEQKYKWLIFNDHLNRFNRLIEKLKREGHDVIEVKTGGIF 1985 Query: 320 NKQDDHHYRISGSQQ-DFDRLCGEIQTRGV--QRILHCFSWSHGPS----LPGSDVEQEM 372 +++ D Y I SQ+ ++ L E++ + + +I+H +WS P L +E+ M Sbjct: 1986 SEKSDGLYTICPSQKMHYEMLFSELEQKDLLPNKIIH--AWSFNPVNEVILDQERIERSM 2043 Query: 373 NKGLFSLFYLTKSLIAQNIREKIDLVLIADLAYQVTRNEPSLNPMHSAFYHLGKVVSSEY 432 N+G +SL Y+ +++ N + L + D ++VT E +L P + K+ + E+ Sbjct: 2044 NEGYYSLLYIAQAIGKINYEGALQLNIFTDRMFEVTGTELNLKPEQATILGFSKICNLEF 2103 Query: 433 AHLRCRCIDLDPET----EVTALLAELDNLPDHYVTAYRKGERYGQRMMELPLSNPLPQE 488 +++CR ID+D ++ E L+ + D V AYR R+ Q +++ P + Sbjct: 2104 QNIKCRTIDMDTDSQQMFEEAGLMESFVDSTD-IVVAYRGRHRWAQTIIQSPFEEEDVEI 2162 Query: 489 LILSDSGCYLIXXXXXXXXXXXXXXXXXKKP-VNLALVSRSGFPDEAEWEDILQKGEAQE 547 L +SG YLI + P V L L+ RS FP +WE L+ + + Sbjct: 2163 DRLRESGVYLITGGLGGIGFEIAKDLANRVPNVKLILIGRSEFPPRNQWEQYLENKD-ER 2221 Query: 548 VIRRIKILQQIQENGSTYTFYRADISRRTELENVLQDVRSRFGSINGVVHAAGVAGD-QF 606 V R I L ++ G+ Y AD+S + +++ ++ +SRFGSINGV+HAAGVA Sbjct: 2222 VSRVISDLLTMESQGAEYMILSADVSNQDDMKQAIEKAKSRFGSINGVIHAAGVADYLGI 2281 Query: 607 LFNREEQRFREVIQPKIAGSIYLAELIT-EPLEFFVCYSSVSSL--EGTPGQGDYVAANG 663 + NRE++ +++ PKI G++ L L+ EP++FFV SS+ ++ GQ Y AAN Sbjct: 2282 MMNREKESNNKILAPKIKGTLVLDALLKDEPIDFFVLCSSIGNVAYHMKFGQSGYNAANE 2341 Query: 664 FLDSFVYSLPANQNGIT--LNWAPWKEIGMAYD-----YETFNQELIFNLLPTGV----A 712 FLD+F + A+ T + W W+E+GM+ + FN ++ ++L GV Sbjct: 2342 FLDAFAFYKRAHDGVFTVAITWPDWQEVGMSLKSAEIWAKQFNMDM-ESVLHDGVTVEEG 2400 Query: 713 MSAFDAALASGEKQVVIGTINKENAVKNFRSSFFYEGNNLLMNYVEPQLVAQTSLSATAS 772 + F + + ++QVV+ I+ + N + + N LL + +L S +T Sbjct: 2401 LKVFRSIINRNQQQVVVSPIDLHWKLLNGANYY----NELLEKGSKNRLKQNRSDVST-- 2454 Query: 773 AGLPEGRTHNRSLQSIKELIRQLWVTLLESESIALDDAFTSIGGNSIFAVYLLQELEKAF 832 T+ I++ + +L + E I + D F +G +S+ V + +L++AF Sbjct: 2455 -------TYRPPTNEIEQQLYELLKDMFGIEEIGIYDNFFDLGMSSLDLVRINVKLKEAF 2507 Query: 833 PGMLGISDIFTYPTINKMAEYV 854 L I ++ + +I +A+Y+ Sbjct: 2508 KRDLPIVVLYEHTSIKSLAKYL 2529 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,278,479,766 Number of extensions: 51838642 Number of successful extensions: 132361 Number of sequences better than 1.0e-05: 480 Number of HSP's gapped: 131715 Number of HSP's successfully gapped: 705 Length of query: 905 Length of database: 757,237,578 Length adjustment: 135 Effective length of query: 770 Effective length of database: 390,699,213 Effective search space: 300838394010 Effective search space used: 300838394010 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)