BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0489.0004.p (850 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00110105.1| COG3321: Polyketide synthase modules and rela... 230 1e-58 ref|NP_929148.1| hypothetical protein [Photorhabdus luminescens ... 226 2e-57 gb|AAK57187.1| MxaC [Stigmatella aurantiaca] 225 4e-57 gb|AAK57190.1| MxaF [Stigmatella aurantiaca] 223 1e-56 emb|CAD89775.1| MelD protein [Melittangium lichenicola] 212 4e-53 >ref|ZP_00110105.1| COG3321: Polyketide synthase modules and related proteins [Nostoc punctiforme] Length = 1850 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 214/826 (25%), Positives = 358/826 (43%), Gaps = 79/826 (9%) Query: 14 LVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKIVPFQHTGAASVDIQQLQEKSEWEH 73 L ++ Q+ S P + + W ++A + V +T V ++Q++ E Sbjct: 1012 LTPEESGNLAAQVLSFENPSHPQEQVSWIVHAIAQ-VSANNTTLKPVSWSEIQKRCNQE- 1069 Query: 74 IEPDFGSIVGRTAFGPRWNNIQQLSQSDDRVLVHVKLGER----------YAEDFSAYGY 123 I G + +W +L S R L V LGER A D + Y Sbjct: 1070 -------IPGADLYQAQWERQIELGASF-RWLNTVWLGEREALGCLQAPPAAFDAAEYQL 1121 Query: 124 HPALLDTG----LNAVTMFILRELYLPFSFKKFTFYDN-MPDAFYSYLRKRAAGGENKET 178 HP L+D+ L A E ++P S K+F F+ D F+ + R + ++ Sbjct: 1122 HPGLIDSCFHLILAATGTINGDETFIPLSIKQFRFFQRPSSDVFWCHARLQHGTESQEDK 1181 Query: 179 ISYDISLIDEQGNVFAEVENYTLKKVPAAMVT-------KDLFHQLHWVKEPRLPAGRNM 231 D+ L D+ G + AEV + +K A++ +D +Q+HW + + + N Sbjct: 1182 RVGDLYLFDDAGQIIAEVIGFEARKASRAVLLNSLQSEGRDSLYQIHWQLQENVASPVNH 1241 Query: 232 MDGAVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDSSYTVGNEEGD-YQRLF 290 G L+F D I GE Y + Y + E + +++L Sbjct: 1242 EPGNWLIFTDGTENGLELAQQLEQQGHYSILAEVGEIYHQLGSQHYQLDPTEPEHFRQLL 1301 Query: 291 ADLQNRKVSRIIHCYAL-DAGGEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAIDLV 349 D+ N + +IH + L + E L L Q S+ ++V++LVQ++ + L Sbjct: 1302 QDIPN--LDGVIHLWGLAEDTTENLSLQGLDKAQTLGCASVLHLVQALVQSQQQTQPRLW 1359 Query: 350 LLGQYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDL------DDQTAWAAIL 403 L+ + I + E L+ QT + LG+ +A E+P ++C +DL D Q +L Sbjct: 1360 LVTRGTQAIDSNLEPLQLSQTTLWGLGRVIAIEHPELNCTRLDLPLTATEDIQI----LL 1415 Query: 404 EEIEDGQNVYQVAYRENERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEIAR 463 E+ Q+AYR+ +RYV + + + P+ + Y E+A+ Sbjct: 1416 AELFSTDTEDQIAYRQGKRYVARLEQVRAQ-FTKSPIPVTSESTYLITGGLGALGLEVAQ 1474 Query: 464 YLSSQNKICLGLLSRGGQNENDGKRNRRMEILEEIER---SGSRVMVCPCDVTAEQELAA 520 +L+ Q L L+ G+R+ + I R +G V + D+T QE+A Sbjct: 1475 WLAQQGAKHLVLV---------GRRSPSTDAQNAIARLATAGVEVTIITADITNPQEVAQ 1525 Query: 521 GLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLIKE-PLDF 579 L ++R + P++G+IHAAG+ G L ++W F RV PK+ G + LH L ++ PLDF Sbjct: 1526 CLQQIRSSHPPLRGIIHAAGVLDDGLLLQQSWERFSRVMAPKVAGAWNLHTLTQDLPLDF 1585 Query: 580 FMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQGIRGTTLNWAVWEEVGMAVDYGV- 638 F+ FSS+A+L GS GQ +Y N ++D A Y R G+ G T+NW W E GMA + G Sbjct: 1586 FVCFSSIASLIGSVGQSNYAAANAFMDALASYRRGLGLPGLTINWGPWAETGMAANLGSR 1645 Query: 639 ----VTGGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAAVQESSFLRIEAGLI 694 + GI P+ + + G+ + QV G + +D V++ S R L Sbjct: 1646 EQARLKDQGIV-PINPEQGLQVLGELLTQQIPQV--GVMTIDWSLFVKQFSS-RTNLKLF 1701 Query: 695 RRLGVPKQTVHDTFPFTITGRADGNYDDIEQAI-----SRIWAETMHLPS---VNIYSSF 746 L V++ F + D + +Q + S+I A+ + S V Sbjct: 1702 EVLAPTSTKVNERSQF-LNQLEDSPPNTRQQLLATHVRSQI-AQILGWNSPEKVEPRQRL 1759 Query: 747 LDIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQQ 792 D+G DSL+A +L +LE L LF Y ++ L Y+ ++ Sbjct: 1760 FDLGVDSLMAIELKNRLESSLGCSLRTTLLFDYPTLEALVDYLSRE 1805 >ref|NP_929148.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE14173.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 4160 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 211/787 (26%), Positives = 350/787 (44%), Gaps = 107/787 (13%) Query: 36 ENHNE----WSLNAEGKIVPFQHTGAASVDIQQLQEKSEWEHIE--PD-FGSIVGRTAFG 88 E+H++ W L+A G + A V +L+ + E + P+ F +G Sbjct: 3137 ESHDDGNDMWQLHANGNVTAVCSPPAEIVSPYELRRNLQLEEVAEAPERFNQAFAD--YG 3194 Query: 89 PRWNNIQQLSQSDDRVLVHVKLGERYAEDFSAYGYHPALLDTGLNAVTMFILR-ELYLPF 147 PRW I + D L ++L + + +D HPALLD G + +L + +PF Sbjct: 3195 PRWQCIAGVWMGDRCALAQLRLNQAFIDDLPDIALHPALLDLGTVFLHACLLPGDASIPF 3254 Query: 148 SFKKFTFYDNMPDAFYSYLRKRAAGGENKETISYDISLI--DEQGN---VFAEVENYTLK 202 + T + + FYS + A +YDI+L DE+ N V AE+ Y L+ Sbjct: 3255 HYGSLTLHQPLCAEFYSLAVETAPR-------TYDITLFSWDERQNCKQVLAEIHGYNLR 3307 Query: 203 K---VPAAMVTKDLFHQLHWVKEPRL---PAGRNMMDGAV-LLFGDEXXXXXXXXXXXXX 255 + +P ++ + W + PR P G + A L+FG + Sbjct: 3308 QFNSLPFQPASES--NVARWCRYPRWLPKPLGEAKQNRAPWLIFGAQAAELSDLSQAAAP 3365 Query: 256 XXXKVIRVRHGETYSREQDSSYTVGNEEG-DYQRLFADLQNRKV--SRIIHCYALDAGGE 312 I V + + ++ +++ ++ DYQRL L ++V RII C+ Sbjct: 3366 GS---IVVEDADEFLQQSTYRFSLRKDQPEDYQRLIDCLIQQQVLPERIIWCWT------ 3416 Query: 313 ASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAIDLVLLGQYGFEITGHEEALEPCQTA- 371 A+G+ +A + + L +K+L + + ++ L+ + G + + LE C A Sbjct: 3417 AAGISQPEA----AFEQLAAAIKALT--GHHRVFNITLISR-GLQAA---KVLEACNAAP 3466 Query: 372 FFNLGKAVAAEYPNVSCRSIDLDDQT--AWAAIL---------EEIEDGQNVYQVAYREN 420 L +AAEYP S R IDL+D T + +++ EE +G V ++ ++ Sbjct: 3467 ALGLLGILAAEYPGCSARHIDLNDDTFATYQSLIAELYTDMQPEETTEGIPVTSISLKQG 3526 Query: 421 ERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEIARYLSSQ-NKICLGLLSRG 479 ER +Q F P + L++ G Y +AR++S+Q +K+ LG+LSR Sbjct: 3527 ERELQTFTELDEIP---RRQILRDGGVYLITGGLGGIGQLLARHISNQCSKVKLGILSRR 3583 Query: 480 GQNENDGKRNRRMEILEEIERSGSRVMVCPCDVTAEQELAAGLDKLREAFGPVKGVIHAA 539 G N +L+ +++SG+ VM+ DV + L L ++R FG + GVIH+A Sbjct: 3584 GTNAVSEA------LLDVLQKSGAEVMMLRADVADDAALTKALAQMRARFGAINGVIHSA 3637 Query: 540 GLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLI-KEPLDFFMLFSSVATLEGSPGQGDY 598 G+ SG L T ++ V K+ GT L I ++PLDF +L SS+A+L G GQ DY Sbjct: 3638 GIEASGLLEHGTSQDWRHVMAAKVSGTQQLMTAISQDPLDFVLLCSSLASLVGGMGQADY 3697 Query: 599 IVGNGYLDGFAPYLRRQGIRGTTLNWAVWEEVGMAVDYGVVTGGGICKPLKTHEAIAAFG 658 N YLD A Y R+Q I T++NW W EVGMAVDY + L E A F Sbjct: 3698 AAANRYLDAVAHYWRQQAIPVTSVNWDTWAEVGMAVDYAARRQESVIG-LSNQEGCAIFD 3756 Query: 659 QAIAMDRSQVMIGSLNLDMLAAVQESSFLRIEAGLIRRLGVPKQTVHDTFPFTITGRADG 718 AIA +Q+++ +Q+ S + A Sbjct: 3757 LAIAGMEAQIVVNKFPPVQRTQLQDLSVISDSAS-------------------------- 3790 Query: 719 NYDDIEQAISRIWAETMHLPSVNIYSSFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFT 778 E+A+ ++W E + ++++ F ++GG SL+ATQ++ +L F L L + Sbjct: 3791 ----PEEAVRQLWYELLGEETIHLEDDFFELGGHSLLATQMISRLRDHFQHCLTLAEFLE 3846 Query: 779 YSSVAEL 785 ++A + Sbjct: 3847 QPTMARV 3853 >gb|AAK57187.1| MxaC [Stigmatella aurantiaca] Length = 5192 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 191/737 (25%), Positives = 322/737 (43%), Gaps = 63/737 (8%) Query: 90 RWNNIQQLSQSDDRVLVHVKL-GERYAEDFSAYGYHPALLDTGLNAVTMFILRE------ 142 RW I+++ L ++L ER +D Y HP L+D+ L A+ ++RE Sbjct: 4430 RW--IERVQSGGREALCQMRLPTER--DDRGLY-VHPGLVDSFLQAMGTDLIREDAQLST 4484 Query: 143 LYLPFSFKKFTFYDNMPDAFYSYLRKRAAGGENKETISYDISLIDEQGNVFAEVENYTLK 202 +Y+P S ++F FY+ ++Y +R A E I+ D+ +++ +G V E+E K Sbjct: 4485 VYVPISVERFRFYEQPTGPVWAYAVRRDAEEAVGEVITGDVYVVNAEGRVLIEIEGLKHK 4544 Query: 203 KVP--AAMVT-----KDLFHQLHWVKEPRLPAGRNMMDGAVLLFGDEXXXXXXXXXXXXX 255 + P A M +D ++L W ++P LP G G ++F DE Sbjct: 4545 RAPREALMAVLRHGQRDTLYELGWKRQP-LPEGVPG-SGRWIVFADETGTGEALAERLLK 4602 Query: 256 XXXKVIRVRHGETYSREQDSSYTVGNEEG-DYQRLFADL--QNRKVSRIIHCYALDAGGE 312 + + VR GE ++R+ +T+ + DY RL + + ++H +A+ G Sbjct: 4603 SGCRPVLVRPGEAFARQDGDRFTLDAQRAEDYARLLKEAVPSGESLGGVVHLWAMR-GAH 4661 Query: 313 ASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAIDLVLLGQYGFEITGHEEALEPCQTAF 372 + + L A S ++ K++ A + A L L+ + + H L Q Sbjct: 4662 GNDVESLHAAHQLGGGSALHLAKAV--ASFPSAARLWLVTRGARALPSHSGPLALNQVPV 4719 Query: 373 FNLGKAVAAEYPNVSCRSIDLDDQTA---WAAILEEIEDGQNVYQVAYRENERYVQEFGR 429 + LG + E+P IDLD + AI E+ QV RE +R+V R Sbjct: 4720 WGLGVVFSQEHPERCGALIDLDPSASGEDATAIWRELSAADGERQVVIREGQRHVARI-R 4778 Query: 430 YSGEPVSGQPLELQENGFYXXXXXXXXXXXEIARYLSSQNKICLGLLSRGGQNENDGKRN 489 S + L+ + Y +AR++ Q L L+ RG + Sbjct: 4779 ASRDEQRNAAQRLRPDASYLLTGGLGGLGLSLARWMVDQGARNLVLIGRGA------AKP 4832 Query: 490 RRMEILEEIERSGSRVMVCPCDVTAEQELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFT 549 E L +E +G++V+V DV+ + ++ L++ E P++GV+HAAG+ G L Sbjct: 4833 EAQETLRTLEAAGAKVLVLQADVSKQADVRRTLEEA-EKLAPLRGVVHAAGVLDDGVLLQ 4891 Query: 550 KTWAEFCRVTKPKIEGTYLLHNLIKEP-LDFFMLFSSVATLEGSPGQGDYIVGNGYLDGF 608 + W F RV PK++G + LH L K+ LDFF+L+SS ATL G PGQG Y N +LD Sbjct: 4892 QDWERFSRVFAPKVDGAWHLHELTKDKELDFFVLYSSAATLLGPPGQGSYAAANAFLDAL 4951 Query: 609 APYLRRQGIRGTTLNWAVWEEVGMAVDYGVVTGGGICKPLKTHEAIAAFGQAIAMDRSQV 668 A + R QG+ ++NW W EVGMA + + A+ AF QA++ + Q+ Sbjct: 4952 AHHRRSQGLPALSINWGPWAEVGMAAQHASRFQTQGIEAFSPEAALKAFSQALSRAQPQL 5011 Query: 669 MIGSLNLDMLAAVQESSFL----RIEAGLI------RRLGVPKQTVHDTFPFTITGRADG 718 L VQ S +L R A + R + P+ H F + Sbjct: 5012 --------TLMQVQWSRYLAQYPRGAAPTVLAEVSGRAVAEPEANGHSASEFRRRLESAE 5063 Query: 719 NYDDIEQAISRIWAETMHLPSVNIYSS------FLDIGGDSLIATQLLRKLEMEFPGILD 772 + + + E + + ++ +S ++G DSL+A +L +L+ L Sbjct: 5064 PRQRLPLLLEHVQGEAVRVLGLDASASLEPRQRLFEVGMDSLMALELRNRLQTTVGASLP 5123 Query: 773 LPDLFTYSSVAELSGYI 789 +F Y + ++ Y+ Sbjct: 5124 STLVFDYPTAEAIANYL 5140 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 195/791 (24%), Positives = 336/791 (42%), Gaps = 59/791 (7%) Query: 41 WSLNAEGKIVPFQHT---GAASVDIQQLQEKS-EWEHIEPDFGSI--VGRTAFGPRWNNI 94 W+L+AEG + + AA V + +L+ + E +E + ++ +G +GP + + Sbjct: 1038 WALHAEGSLRHGDASVVEKAAPVALDELRARCGEEASVEAHYQTLKEIG-LEYGPSFRVV 1096 Query: 95 QQLSQSDDRVLVHVKL-GERYAEDFSAYGYHPALLDTGLNAVTMFILREL------YLPF 147 ++L ++ L V+L GE AE+ Y HPALLD G V L L Y+P Sbjct: 1097 RELYRAKGEALGRVQLEGELTAEE-ERYSLHPALLD-GCFQVLAAALEGLDSEGGVYVPV 1154 Query: 148 SFKKFTFYDNMPDAFYSYLRKRAAGGENKETISYDISLIDEQGNVFAEVENYTLKKVPAA 207 + + A +S++R + TI D++L+++QG V AEV KK+ AA Sbjct: 1155 ALSRLRVLVRPEAALWSHVRIVSGAEAGSNTIECDVTLLNDQGRVVAEVRRLVCKKIAAA 1214 Query: 208 MVTKD----LFHQLHW---VKEPRLPAGRNMMDGAVLLFGDEXXXXXXXXXXXXXXXXKV 260 D + W ++ R G + G L+F D Sbjct: 1215 SAPADEVDRWIYSAQWEPQQRQARAETGSSRTAGRWLVFADARGIGQSLASGLAERAGGC 1274 Query: 261 IRVRHGETYSREQDSSYTVGNEE-GDYQRLFADL--QNRKVSRIIHCYALDAGGEASGLG 317 + V G +Y R + Y + + D+Q L + ++H Y LD + Sbjct: 1275 VVVEAGPSYERLEADRYRINPSKLEDFQALLKEAFSDQSPCKGMVHLYGLDVASNVTEPE 1334 Query: 318 HLQALQAKSIQSLFYIVKSLVQAKYKQAIDLVLLGQYGFEITGHEEALEPCQTAFFNLGK 377 + + S S+ Y++++ Q ++ L L+ I E+ P L Sbjct: 1335 SFERALSLSSTSVVYLLQAWAQRGWRDTPRLWLVTTGVQVIASGEQPGSPAAAPLVGLAA 1394 Query: 378 AVAAEYPNVSCRSIDLDDQTA---WAAILEEIEDGQNVYQVAYRENERYVQEFGRYSGEP 434 + E+P + C +DL Q + A++ EE+ ++A R R+V GR Sbjct: 1395 VITHEHPELRCAHVDLSAQPSPEEIASLTEELLGDGAEDRIALRGAVRHVARLGRGISGR 1454 Query: 435 VSGQPLELQENGFYXXXXXXXXXXXEIARYLSSQNKICLGLLSRGGQNENDGKRNRRMEI 494 + +P E +G Y E+A++ + L L RG +E K + Sbjct: 1455 KAAEPREFTADGTYLITGGLGGLGLEVAKWFIQRGARNLALTGRGAPSEEAQK------V 1508 Query: 495 LEEIERSGSRVMVCPCDVTAEQELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAE 554 L E+ +G+ V V DVT+ ++A L + P++GV+HAAG+ G L Sbjct: 1509 LGELRANGAEVRVYRADVTSAADVARLLGSIDSELPPLRGVVHAAGVIADGVLTQLDEPR 1568 Query: 555 FCRVTKPKIEGTYLLHNLIK-EPLDFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLR 613 V PK++G + LH + PL+ F++FSS A++ GSPGQG+Y N ++D A + R Sbjct: 1569 LRAVLAPKVQGAWNLHVQTQGRPLELFVMFSSAASMMGSPGQGNYAAANAFMDVLAHHRR 1628 Query: 614 RQGIRGTTLNWAVWEEVGMAV------DYGVVTGGGICKPLKTHEAIAAFGQAIAMDRSQ 667 G+ G ++NW W +VG+A D + G G P +A+ A G+ + + +Q Sbjct: 1629 AAGLPGLSVNWGPWADVGLAAVATNRGDRLALRGVGNMPP---AQALEALGRLLVQEAAQ 1685 Query: 668 VMIGSLNL----DMLAAVQESSFLRI-----EAGLIRRLGVPKQTVHDTFPFTITGRADG 718 V + L+L + + +S FL + + R G ++ + P G +G Sbjct: 1686 VAVVPLDLRQWREFYLSAAQSPFLSVLMQEKVSTPASRKGSARELLAAAEPEQRKGILEG 1745 Query: 719 NYDDIEQAISRIWAETMHLPSVNIYSSFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFT 778 + + + RI M + F D+G DSL +L ++E L ++ Sbjct: 1746 Y---LREQLGRIL--RMEPSRIEPDQPFGDLGMDSLTGLELRNRIESGLKLTLSATLIYA 1800 Query: 779 YSSVAELSGYI 789 Y +V L+ Y+ Sbjct: 1801 YPTVQALTTYL 1811 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 130/540 (24%), Positives = 228/540 (42%), Gaps = 49/540 (9%) Query: 286 YQRLFADLQNRKVSRIIHCYALDAG-GEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQ 344 ++RL ++ + ++H + DA L +++ Q + ++ +V++ +++ Sbjct: 2828 FERLLQEVG--PIRAVVHLWGADASPASEPKLAEVESAQQLGVHAVVRLVQAFLKSGSAS 2885 Query: 345 AIDLVLLGQYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDLDDQTAWA---A 401 L L + G + G P Q + LG+ +A EYP+ +DLD A Sbjct: 2886 GARLWLCTR-GSQAVGGAMGGSPLQAPLWGLGRVMALEYPDAWGGLLDLDPSAPAGEVEA 2944 Query: 402 ILEEIE--DGQNVYQVAYRENERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXX 459 + +E+ DG++ Q A+R+ RYV + +P + L+ + Y Sbjct: 2945 LWKELSGFDGED--QAAFRDGVRYVARLVPAAPKPALAP-VALRPDASYLVTGGLGGLGL 3001 Query: 460 EIARYLSSQNKICLGLLSRGGQNEN--------DGKRNRRMEILEEIERSGSRVMVCPCD 511 +AR+L S+ L LL R G + + R++ +E +E +G+ V D Sbjct: 3002 HVARWLVSKGARHLVLLGRKGLPDRSEWPTIARESDVGRQIAAVEALEANGAVVHALSAD 3061 Query: 512 VTAEQELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHN 571 V +A + +++ P+KG+IHAAG++ L T A + +PK+ G ++LH Sbjct: 3062 VGNPIRMAEVIQSIQQGPAPLKGIIHAAGVSTLVSLDTMDEAALASILRPKVTGGWVLHQ 3121 Query: 572 LIKE-PLDFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQGIRGTTLNWAVWEEV 630 + + LDF + FSS + + GS Y GN +LD A Y R +G+ ++NW W Sbjct: 3122 VTQGLDLDFTVYFSSGSAVWGSARMAHYAAGNQFLDSLAHYRRARGLHALSINWGPWAAE 3181 Query: 631 GMAVDYGV-------VTGGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAAVQE 683 GM + G+ + G + L EA+ +AMD +Q + ++ + +V E Sbjct: 3182 GMVAEEGLRWFERMGLRGVSVEGGLHVLEAL------LAMDVTQRSVAQIDWSLFKSVYE 3235 Query: 684 SSFLRIEAGLIRRLGVPKQTVHDTFPFTITGRADGNYDDIEQAISR----IW-----AET 734 S R L+ LG V + + A + W A Sbjct: 3236 S---RTRKPLLEALGPASVPVPRSVEVAAGNEELAQLRNASPARRKELVIAWVREEVARV 3292 Query: 735 MHLP---SVNIYSSFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQ 791 + P SV + F + G DS+ A +L R+L F L F +V LS +I Q Sbjct: 3293 LGFPSSASVKLEQGFFETGMDSITAVELRRRLVARFGVQLATTVAFDRPTVLALSTHILQ 3352 >gb|AAK57190.1| MxaF [Stigmatella aurantiaca] Length = 2368 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 213/840 (25%), Positives = 355/840 (42%), Gaps = 72/840 (8%) Query: 1 LIAGESEGHQVHTLVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKIVPFQHTGAASV 60 L AGES QV L E+ Q QI+SRA E W +A G + ++ Sbjct: 1502 LKAGESRRVQV-VLNEEGTGQASFQISSRA-----EGDKSWRKHAAGSLRREENA----- 1550 Query: 61 DIQQLQEKSEW--EHIEPDFGSIVGRT-------AFGPRWNNIQQLSQSDDRVLVHVKLG 111 +Q E E E +E + S V +GP + ++QL +S+ L ++L Sbjct: 1551 TLQLTAEPPELLRERLEVEISSEVHYQRRQDQGLVYGPTFQGLRQLWRSEREGLGRLELP 1610 Query: 112 ERYAEDFSAYGYHPALLDTGLNAVTMFIL--------RELYLPFSFKKFTFYDNMPDAFY 163 E+ A D Y HPALLD L I Y+P + + A + Sbjct: 1611 EQVASDIGEYRLHPALLDASLQVAVELIAPMTGASTAAPTYVPVGLGRIRLFQKPGRAAW 1670 Query: 164 SYLRKRAAGGENKETISYDISLIDEQGNVFAEVENYTLKKVPA-AMVTKDL---FHQLHW 219 +++ G + S+DI L+D+QG+V E+E L ++ A A V K+L +Q+ W Sbjct: 1671 VWVKAVGEGASGERERSFDIRLLDDQGHVMLEIEELRLYRLEAGAAVRKELGEWIYQVDW 1730 Query: 220 VKEP---RLP-AGRNMMDGAVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDS 275 +P LP R+ G+ L+ D + V+ GE Y Sbjct: 1731 ESQPLAAELPWPARSA--GSWLILSDSSGVGQRLSSLLRARGETCVLVQPGEKYRSIGPG 1788 Query: 276 SYTVGNEEGDY-QRLFADLQNR---KVSRIIHCYALD-AGGEASGLGHLQALQAKSIQSL 330 +Y V G++ +RL D ++H ++LD A +A L+A + S+ Sbjct: 1789 AYEVDPRNGEHLRRLLGDAMGAGAPPCRGVVHLWSLDCASNDALTPQSLEASRRLGTTSV 1848 Query: 331 FYIVKSLVQAKYKQAIDLVLLGQYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRS 390 ++V++L +A ++ A L L + + + + Q + LG+ ++ E P + C Sbjct: 1849 LHLVQALSRAGWRDAPRLWLATRGARSVGKEPQRVNVAQAPLWGLGQVLSLEQPELRCTR 1908 Query: 391 IDLDD--QTAWAAILEEIEDGQNVYQVAYRENERYVQEFGRYSGEPVSGQPLE-LQENGF 447 +DL+ A++ E+ Q A+R R V R + + P L+ +G Sbjct: 1909 VDLEGGADICADALIREVSSTVFEDQAAWRAGTRLVARLSRAADALSTRDPATILRADGA 1968 Query: 448 YXXXXXXXXXXXEIARYLSSQNKICLGLLSRGGQNENDGKRNRRMEILEEIERSGSRVMV 507 Y E+AR+L S L LL R + + L E+ ++G+ V Sbjct: 1969 YLITGGLGGLGLEVARWLVSNGARHLLLLGRRAPSAEA------EQTLAELRQAGAHVEP 2022 Query: 508 CPCDVTAEQELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTY 567 DV + ++A L ++ E P++GV HAAGL G L T F V PK+ GT+ Sbjct: 2023 FQADVASPDDVARALARVNETMPPLRGVFHAAGLLEDGLLINLTEERFASVMAPKVLGTW 2082 Query: 568 LLHNLIKE-PLDFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQGIRGTTLNWAV 626 LH + PLD F+LFSSVA+ G+PGQ +Y N ++D A R +G+ ++NW Sbjct: 2083 NLHTQTRHLPLDLFVLFSSVASSLGTPGQANYSSANAFMDALAHARRAEGLPALSINWGT 2142 Query: 627 WEEVGMA---VDYGVVTGGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDM-----L 678 W VG+A + G + + +A+ AFG + R Q+ + S L Sbjct: 2143 WTSVGLAAAQANRGERLEARGLRGMSPDKALMAFGMLLGQGRPQLSVMSFESRQWLGFYL 2202 Query: 679 AAVQESSFLRIEAGLIRRLGVP------KQTVHDTFPFTITGRADGNYDDIEQAISRIWA 732 AA Q F R+ R V ++ + DG+ ++ + R Sbjct: 2203 AAAQSPFFTRLSQEQAGRPSVEQGRSRIREQLEAARGSERRALLDGHLRELIGGVLR--- 2259 Query: 733 ETMHLPSVNIYSSFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQQ 792 M ++ + +G DSL++ ++ +LE L ++TY ++A L+ Y+ ++ Sbjct: 2260 --MEPSRIDPRTPLGSLGLDSLMSMEIRNRLEASLGLKLSATVVWTYPTLAALTPYLAEK 2317 >emb|CAD89775.1| MelD protein [Melittangium lichenicola] Length = 3284 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 190/762 (24%), Positives = 330/762 (43%), Gaps = 50/762 (6%) Query: 35 AENHNE-WSLNAEG--KIVPFQHTGAASVDIQQLQEKSEWE----HIEPDFGSIVGRTAF 87 AE+ NE W L+A G ++ P V L+ + + + F S+ + Sbjct: 2446 AESSNEPWVLHATGTLRVAPRGAPAPEPVSPDVLRSRCARDVPAATLRAHFQSL--GIHY 2503 Query: 88 GPRWNNIQQLSQSDDRVLVHVKLGERYAEDFSAYGYHPALLDTGLNAVTMFILRE----- 142 GP + I+++ L V+L E A + + + HPALLD L +L + Sbjct: 2504 GPGFQGIERIHLGSGEALGWVQLPEALASESAHFPLHPALLDACLQVCGATLLGDGTKAP 2563 Query: 143 ---LYLPFSFKKFTFYDNMPDAFYSYLRKRAAGGENKETISYDISLIDEQGNVFAEVENY 199 LYLP FK+ F+ A +S++ R + ++ D+ L+D G V A VE Sbjct: 2564 EDTLYLPVGFKRLQFWRAAGAACWSHVSMRPRDPSAEGVLTADVRLLDASGVVCAVVEGL 2623 Query: 200 TLKKVPAAMVTKDL------FHQLHWVKEPRLPAGRNMMDGAVLLFGDEXXXXXXXXXXX 253 ++V + + + L H++ W +P +++G L+ D Sbjct: 2624 RFQRVGNSALQRLLRSGSQWTHEVRWEAQPHDAGTEAVLEGTWLVLADATGTGDALVRSL 2683 Query: 254 XXXXXKVIRVRHGETYSREQDSSYTVG-NEEGDYQRLFADLQ---NRKVSRIIHCYALDA 309 + + R G Y+ ++T+ + D+ RL D I+H + L+ Sbjct: 2684 RGRGVRCVVARPGAAYAAHDGQTFTLDPSRMEDFSRLLRDASAPGTPPCRGIVHLWGLEP 2743 Query: 310 GGEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAIDLVLLGQYGFEITGHEEALEP-C 368 + L L+ Q +S+ ++ ++LV+ ++ + L+ + G + TG E Sbjct: 2744 DAPVT-LASLREAQRLGCESVLHLTQALVRGEFPVRPRMFLVTR-GTQRTGQEPTPPALA 2801 Query: 369 QTAFFNLGKAVAAEYPNVSCRSIDLDDQ---TAWAAILEEIEDGQNVYQVAYRENERYVQ 425 Q+A + LG+ +A E+P S +DLD + T A+++ E+ QVAYR+ +RYV Sbjct: 2802 QSALWGLGRTLALEHPEFSPALVDLDSRAPSTEDASLIAELLHVPRGEQVAYRQGQRYVA 2861 Query: 426 EFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEIARYLSSQNKICLGLLSRGGQNEND 485 RY+G L+ +G Y ++AR++ + L L+ R E Sbjct: 2862 RLARYAGSDARSAASRLRPDGAYLITGGLGGLGLQVARWMVERGARHLVLMGRKEPGEAA 2921 Query: 486 GKRNRRMEILEEIERSGSRVMVCPCDVTAEQELAAGLDKLREAFGPVKGVIHAAGLAGSG 545 E L + ++G+ V + DV+ ++A L L + ++GV+H AG+ G Sbjct: 2922 ------KESLRALRQAGAEVTLASGDVSQPGDVARVLASLAQTKTALRGVMHLAGVVDDG 2975 Query: 546 FLFTKTWAEFCRVTKPKIEGTYLLHNLIK-EPLDFFMLFSSVATLEGSPGQGDYIVGNGY 604 L + + F RV PK G + LH + LD F+LFSS A+L G+ GQG+Y N + Sbjct: 2976 TLLHQNASRFERVLAPKQAGGWNLHEQTRGMDLDLFVLFSSSASLLGAAGQGNYAAANAF 3035 Query: 605 LDGFAPYLRRQGIRGTTLNWAVWEEVGMAVDYGVVTGGGICKPLKTHEAIAAFGQAIAMD 664 LD A + R G++ ++NW W GMA + + + + A GQ AM+ Sbjct: 3036 LDALAHHRRALGLKAVSINWGAWSGHGMAAAFASPEQQRGSEWIDPERGLEALGQ--AME 3093 Query: 665 RSQVMIGSLNLDMLAAVQE----SSFLR--IEAGLIRRLGVPKQTVHDTFPFTITGR-AD 717 + L +D VQ ++FLR IE G + G + T+ D GR + Sbjct: 3094 EGPAAVAVLPVDWNQYVQRFASSANFLRKLIEPGRVGTPGSREATLVDRLKGLPRGRQQE 3153 Query: 718 GNYDDIEQAISRIWAETMHLPSVNIYSSFLDIGGDSLIATQL 759 D + Q + ++ ++ ++ D G DSL+A +L Sbjct: 3154 VLLDHVHQQVHQVLGVSLS-KALAGNDRLFDAGMDSLMAIEL 3194 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,234,682,446 Number of extensions: 51746163 Number of successful extensions: 126635 Number of sequences better than 1.0e-05: 564 Number of HSP's gapped: 125554 Number of HSP's successfully gapped: 817 Length of query: 850 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 716 Effective length of database: 393,414,312 Effective search space: 281684647392 Effective search space used: 281684647392 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)