BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0489.0001.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] 196 3e-49 pir||T44806 mycosubtilin synthetase chain mycA [imported] - Baci... 196 5e-49 dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] 195 7e-49 ref|NP_485689.1| similar to polyketide synthase [Nostoc sp. PCC ... 155 8e-37 ref|ZP_00107678.1| COG1020: Non-ribosomal peptide synthetase mod... 154 2e-36 >emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] Length = 3982 Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 131/200 (65%), Gaps = 1/200 (0%) Query: 43 DIAVIGVASRFSNTGSTSEVEQLLTLGVDSIQELPAGRKEQADLFLPLFQVEKDHAQYDK 102 DIA+IG++ + S+ LL G SI+E P R + A +L Q E + +Q+ K Sbjct: 670 DIAIIGMSLNVPGASTKSDFWNLLEKGEHSIREYPESRLKDAADYLKSIQSEFNESQFVK 729 Query: 103 AGYLSEIDPFDFAFFNISPREASLMDPNQRLFLQLAWEAIEEAGYGGTQLTGSKTGVFIG 162 GYL EID FD++FF ++P+ A MDPNQRLFLQ AW AIE+AGY G + GS+ GV+ G Sbjct: 730 GGYLDEIDRFDYSFFGLAPKAAQFMDPNQRLFLQSAWHAIEDAGYAGGSMNGSRVGVYAG 789 Query: 163 YSSDFGEEYKKGIQMLVPEAMGVAIPGNIKSVIASRISHYLDLKGPAVVFDTACSSSLVA 222 YS G +Y++ + PE + I GN+ SV+ASRI+++L+LKGPAV DTACSSSL A Sbjct: 790 YSK-VGYDYERLLSANYPEELHQYIVGNLPSVLASRIAYFLNLKGPAVTVDTACSSSLAA 848 Query: 223 IHFACRQLIEGSCDLXXXGG 242 +H AC+ LI G C++ GG Sbjct: 849 VHMACKSLISGDCEMALAGG 868 >pir||T44806 mycosubtilin synthetase chain mycA [imported] - Bacillus subtilis gb|AAF08795.1| MycA [Bacillus subtilis] Length = 3971 Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 94/205 (45%), Positives = 136/205 (66%), Gaps = 1/205 (0%) Query: 38 KEADTDIAVIGVASRFSNTGSTSEVEQLLTLGVDSIQELPAGRKEQADLFLPLFQVEKDH 97 + + DIA+IG++ + S+ LL G I+E PA R + A +L + E++ Sbjct: 666 RSSSKDIAIIGMSLNVPGASNKSDFWHLLENGEHGIREYPAPRVKDAIDYLRSIKSERNE 725 Query: 98 AQYDKAGYLSEIDPFDFAFFNISPREASLMDPNQRLFLQLAWEAIEEAGYGGTQLTGSKT 157 Q+ + GYL EID FD++FF ++P+ A MDPNQRLFLQ AW AIE+AGY G ++GS+ Sbjct: 726 KQFVRGGYLDEIDRFDYSFFGLAPKTAKFMDPNQRLFLQSAWHAIEDAGYAGDTISGSQL 785 Query: 158 GVFIGYSSDFGEEYKKGIQMLVPEAMGVAIPGNIKSVIASRISHYLDLKGPAVVFDTACS 217 GV++GYS G +Y++ + PE + I GN+ SV+ASRI+++L+LKGPAV DTACS Sbjct: 786 GVYVGYSK-VGYDYERLLSANYPEELHHYIVGNLPSVLASRIAYFLNLKGPAVTVDTACS 844 Query: 218 SSLVAIHFACRQLIEGSCDLXXXGG 242 SSLVA+H AC+ L+ G C++ GG Sbjct: 845 SSLVAVHMACKALLTGDCEMALAGG 869 >dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] Length = 3982 Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 1/200 (0%) Query: 43 DIAVIGVASRFSNTGSTSEVEQLLTLGVDSIQELPAGRKEQADLFLPLFQVEKDHAQYDK 102 DIA+IG++ + S+ LL G SI+E P R + A +L Q E + +Q+ K Sbjct: 670 DIAIIGMSLNVPGASTKSDFWNLLEKGEHSIREYPESRLKDAADYLKSIQSEFNESQFVK 729 Query: 103 AGYLSEIDPFDFAFFNISPREASLMDPNQRLFLQLAWEAIEEAGYGGTQLTGSKTGVFIG 162 GYL EID FD++FF ++P+ A MDPNQRLFLQ AW AIE+AGY G + GS+ GV+ G Sbjct: 730 GGYLDEIDRFDYSFFGLAPKTAQFMDPNQRLFLQSAWHAIEDAGYAGGSMNGSRVGVYAG 789 Query: 163 YSSDFGEEYKKGIQMLVPEAMGVAIPGNIKSVIASRISHYLDLKGPAVVFDTACSSSLVA 222 YS G +Y++ + PE + I GN+ SV+ASRI+++L+LKGPAV DTACSSSL A Sbjct: 790 YSK-VGYDYERLLSANYPEELHQYIVGNLPSVLASRIAYFLNLKGPAVTVDTACSSSLAA 848 Query: 223 IHFACRQLIEGSCDLXXXGG 242 +H AC+ L+ G C++ GG Sbjct: 849 VHMACKSLMSGDCEMALAGG 868 >ref|NP_485689.1| similar to polyketide synthase [Nostoc sp. PCC 7120] pir||AC2012 hypothetical protein all1649 [imported] - Nostoc sp. (strain PCC 7120) dbj|BAB78015.1| ORF_ID:all1649~similar to polyketide synthase [Nostoc sp. PCC 7120] Length = 1570 Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 6/200 (3%) Query: 44 IAVIGVASRFSNTGSTSEVEQLLTLGVDSIQELPAGRKEQADLFLPLFQVE-KDHAQYDK 102 IA+IG+ RF S QLL+ GVD+I E+PA R + + + K +A+Y Sbjct: 4 IAIIGIGCRFPGADSPQAFWQLLSNGVDAITEIPAERWNIDEFYDRNPETPGKMNARY-- 61 Query: 103 AGYLSEIDPFDFAFFNISPREASLMDPNQRLFLQLAWEAIEEAGYGGTQLTGSKTGVFIG 162 G+LS++D FD FF ISPREA LMDP QRL L++AWEA+E+AG QLTGSKTGVF+G Sbjct: 62 GGFLSQVDRFDPHFFGISPREALLMDPQQRLLLEVAWEALEDAGIVREQLTGSKTGVFVG 121 Query: 163 YSSDFGEEYKKGIQMLVPEAMGVAIPGNIKSVIASRISHYLDLKGPAVVFDTACSSSLVA 222 S++ +Y + G + GN ++ A R+S+ +L+GP++ DTACSSSLVA Sbjct: 122 ISTN---DYSRIHPEFDSNPQGYDLTGNCINIAAGRLSYLFNLRGPSLAVDTACSSSLVA 178 Query: 223 IHFACRQLIEGSCDLXXXGG 242 +H AC+ + + G Sbjct: 179 VHLACQSIWNQESSMAIASG 198 >ref|ZP_00107678.1| COG1020: Non-ribosomal peptide synthetase modules and related proteins [Nostoc punctiforme] Length = 4682 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 122/205 (59%), Gaps = 14/205 (6%) Query: 43 DIAVIGVASRFSNTGSTSEVEQLLTLGVDSIQELPAGRKEQADLFLPLFQVEKDHAQYDK 102 DIAVIG++ RF + +LL+ G ++I ++P+ R +D + +K+ +K Sbjct: 1120 DIAVIGMSGRFPQSPDLQSFWELLSQGKNAIAQVPSLRWNLSDWY------DKNPGAANK 1173 Query: 103 A-----GYLSEIDPFDFAFFNISPREASLMDPNQRLFLQLAWEAIEEAGYGGTQLTGSKT 157 G++ ID FD FF ISPREA LMDP QRLFL++AWEA+E AGY S+ Sbjct: 1174 TYSCWGGFIDHIDQFDPLFFQISPREAELMDPQQRLFLEVAWEALENAGYSPESFAQSQV 1233 Query: 158 GVFIGYSSDFGEEYKKGIQMLVPEAMGVAIPGNIKSVIASRISHYLDLKGPAVVFDTACS 217 GVF+G S++ Y + I + + A GN ++IA+R+S L+L+GP+V+ DT CS Sbjct: 1234 GVFVGCSNN---GYYQRIAPALNTSDYSAGIGNQNAIIANRVSFLLNLRGPSVLIDTMCS 1290 Query: 218 SSLVAIHFACRQLIEGSCDLXXXGG 242 SSLVA+H ACR L +G C GG Sbjct: 1291 SSLVALHMACRSLQQGECTTALAGG 1315 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 388,375,533 Number of extensions: 15632448 Number of successful extensions: 38588 Number of sequences better than 1.0e-05: 800 Number of HSP's gapped: 37342 Number of HSP's successfully gapped: 1097 Length of query: 261 Length of database: 757,237,578 Length adjustment: 123 Effective length of query: 138 Effective length of database: 423,280,401 Effective search space: 58412695338 Effective search space used: 58412695338 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)