BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0486.0005.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_979829.1| acetyltransferase, GNAT family family [Bacillus... 115 3e-25 ref|NP_646764.1| ORFID:MW1947~hypothetical protein, similar to a... 80 2e-14 ref|NP_978568.1| acetyltransferase, GNAT family [Bacillus cereus... 72 3e-12 ref|NP_831948.1| Acetyltransferase [Bacillus cereus ATCC 14579] ... 72 4e-12 gb|AAP83142.1| putative acetyltransferase [Lysobacter enzymogenes] 72 4e-12 >ref|NP_979829.1| acetyltransferase, GNAT family family [Bacillus cereus ATCC 10987] gb|AAS42437.1| acetyltransferase, GNAT family family [Bacillus cereus ATCC 10987] Length = 144 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 91/144 (63%), Gaps = 2/144 (1%) Query: 10 LQIRKCGLNDLERVTALLREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGL 69 ++IRK +D+++ T L+ + GYP++L MK RM+ +E++P + T VA DN +VGM+G+ Sbjct: 1 MEIRKYNSDDIKQFTDLMPDLGYPSSLDEMKVRMQRIESNPNYYTFVAINDNNLVGMIGI 60 Query: 70 RKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVER 129 + + Y D +IT+L+ +E RG G+ K L+ EEW+ ++G ++L SG +R Sbjct: 61 -TIHTTYTNNDEKIQITSLVTKKEYRGQGIAKALIKYVEEWSLKRGSNFIYLLSGKSEQR 119 Query: 130 APAHAFYRHIGFEKTAGYRFNKSL 153 AH Y+ +G+E T GYRF K + Sbjct: 120 IKAHELYKFLGYEIT-GYRFVKRM 142 >ref|NP_646764.1| ORFID:MW1947~hypothetical protein, similar to acetyltransferase [Genomic island nu Sa 4mw] [Staphylococcus aureus subsp. aureus MW2] dbj|BAB95812.1| MW1947 [Staphylococcus aureus subsp. aureus MW2] Length = 147 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 2/129 (1%) Query: 20 LERVTALLREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGLRKVRSYYKQA 79 L ++ L + GYPT + +K+R++ + + L+ +N+++G+ G+ K+ Y K A Sbjct: 16 LNQLCKLYDDLGYPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNA 75 Query: 80 DCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVERAPAHAFYRHI 139 + + I A ++ E R G GKRL+A +EE++++ C + L SGNR ER AH Y Sbjct: 76 EYM-RILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDN 134 Query: 140 GF-EKTAGY 147 G+ T+G+ Sbjct: 135 GYVSNTSGF 143 >ref|NP_978568.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] gb|AAS41176.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] Length = 143 Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 5/145 (3%) Query: 10 LQIRKCGLNDLERVTALLREF-GYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVG 68 QIR+ ++D++ + +L +E G + M R++ ++ PF V E + ++G++G Sbjct: 3 FQIREATIDDIDALCSLTKELKGSSISYEDMNNRLQFVQMSPFDFLYVYEEEKTILGLLG 62 Query: 69 LRKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVE 128 R +R + EI+ + V +R G+G+ L+ AE+ A++ C +L SG + Sbjct: 63 FR-IRENLEDVTRYGEISIISVDSTIRRKGVGQALMDYAEQLAKKHNCIGTWLVSGTK-- 119 Query: 129 RAPAHAFYRHIGFEKTAGYRFNKSL 153 R AH FY+ +G+E GYRF K Sbjct: 120 RVEAHPFYKKLGYE-VNGYRFVKHF 143 >ref|NP_831948.1| Acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP09149.1| Acetyltransferase [Bacillus cereus ATCC 14579] Length = 143 Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 5/143 (3%) Query: 10 LQIRKCGLNDLERVTALLREF-GYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVG 68 QIR+ ++D++ + +L +E G + M R++ ++ PF V E + + G++G Sbjct: 3 FQIREATIDDIDALCSLTKELKGSSISYEDMNNRLQFVQMSPFDFLYVYEEEEAIFGLLG 62 Query: 69 LRKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVE 128 R +R + EI+ + V +R G+G+ L+ AE+ A++ C +L SG + Sbjct: 63 FR-IRENLEDVTRYGEISIISVDSNIRRKGIGQVLMDYAEQLAKKHNCIGTWLVSGTK-- 119 Query: 129 RAPAHAFYRHIGFEKTAGYRFNK 151 R AH FY+ +G+E GYRF K Sbjct: 120 RVEAHPFYKKLGYE-VNGYRFVK 141 >gb|AAP83142.1| putative acetyltransferase [Lysobacter enzymogenes] Length = 153 Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 4/151 (2%) Query: 3 SSTQEQVLQIRKCGLNDLERVTALLREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNE 62 + + + +R D V LL + GYP T ER+ + DP H L+AE+D Sbjct: 5 APSDQTAPTVRLAETGDASDVAELLSQLGYPCTRDEAIERIAHLREDPRHYLLLAEIDGH 64 Query: 63 VVGMVGLRKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLR 122 G++ S A+ + ITAL+VA G G+G++L+ E AR+ G + + Sbjct: 65 ACGLISSHTRYSLTHGAE-LARITALVVARSCHGQGIGRQLLREVERRARRDGVSRVEVT 123 Query: 123 SGNRVERAPAHAFYRHIGFEKTAGYRFNKSL 153 S V R AH FYR G+ +F K+L Sbjct: 124 SN--VSRTEAHEFYRRCGYAD-GSLKFVKTL 151 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.322 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 211,249,477 Number of extensions: 7572582 Number of successful extensions: 18645 Number of sequences better than 1.0e-05: 36 Number of HSP's gapped: 18749 Number of HSP's successfully gapped: 36 Length of query: 154 Length of database: 757,237,578 Length adjustment: 112 Effective length of query: 42 Effective length of database: 453,146,490 Effective search space: 19032152580 Effective search space used: 19032152580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 120 (50.8 bits)