BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0476.0037.p (355 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAI87129.1| unknown [environmental sequence] 86 1e-15 gb|EAJ01325.1| unknown [environmental sequence] 84 4e-15 gb|EAJ91388.1| unknown [environmental sequence] 82 2e-14 gb|EAJ57632.1| unknown [environmental sequence] 81 3e-14 gb|EAH17246.1| unknown [environmental sequence] 80 7e-14 >gb|EAI87129.1| unknown [environmental sequence] Length = 356 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 13/203 (6%) Query: 164 GGALYAGVSRPEENLSSWNGGMIRFRKEDGQISRAKFKLMEA------EKEFAIPFCSFR 217 G + Y G+S PE N S G++R + SR+ KL EA + E+ S Sbjct: 156 GSSAYLGISYPENN-SPLENGIMRLKFPADAPSRSTLKLEEAFLQFIPKDEWDTRLTSGM 214 Query: 218 NAVDIGASPGGWTSFLLERGLKVTAVDPALMHESLRKNPGLKILRKNAGDVKFQDNEFDL 277 AVD+GA PGGWT L++R + VTA+D +M +SL +K + + Sbjct: 215 RAVDLGACPGGWTYQLVKRSMMVTAIDNGMMAQSLMDTGQVKHFQVDGFKFSPDKKNVYW 274 Query: 278 LVCDMSWSPKLMAKLVTGLLHSLSPGGTAIVTVKLMHKKPMAVIKEIIAM----FESERM 333 LVCDM P+ + +LV L + +I +KL KK + E++ M + + Sbjct: 275 LVCDMIEKPQRVGQLVCDWLIN-EWCQESIFNLKLPMKKRYETVVEVLDMMRQKLDEAGL 333 Query: 334 QIQ-RAKQLFHNRDEITLYMIKY 355 ++ +AK L+H+R+E+T+++ K+ Sbjct: 334 DVEFQAKHLYHDREEVTVHVRKF 356 >gb|EAJ01325.1| unknown [environmental sequence] Length = 317 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 15/204 (7%) Query: 164 GGALYAGVSRPEENLSSWNGGMIRFRKEDGQISRAKFKLMEAEKEFAIP-------FCSF 216 G + Y G+S PE N S G++R + SR+ KL EA +F IP S Sbjct: 117 GSSAYLGISYPENN-SPLENGIMRLKFPSDAPSRSTLKLEEAFIQF-IPKDEWDSRLTSG 174 Query: 217 RNAVDIGASPGGWTSFLLERGLKVTAVDPALMHESLRKNPGLKILRKNAGDVKFQDNEFD 276 AVD+GA PGGWT L++R + VTA+D +M +SL +K + + Sbjct: 175 MRAVDLGACPGGWTYQLVKRSMMVTAIDNGMMAQSLMDTGQVKHFQVDGFKFSPDKKNVY 234 Query: 277 LLVCDMSWSPKLMAKLVTGLLHSLSPGGTAIVTVKLMHKKPMAVIKEIIAMFESER---- 332 LVCDM P+ + +LV L + +I +KL KK + E++ M + + Sbjct: 235 WLVCDMIEKPQRVGQLVCDWLIN-EWCQESIFNLKLPMKKRYETVVEVLEMMQQKLDEAG 293 Query: 333 MQIQ-RAKQLFHNRDEITLYMIKY 355 + ++ +AK H+R+E+T+++ K+ Sbjct: 294 LDVEFQAKHCTHDREEVTVHVRKF 317 >gb|EAJ91388.1| unknown [environmental sequence] Length = 361 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 24/233 (10%) Query: 138 LQERLQDLGAEFTVQDPAW-VISVYADG-GALYAGVSRPEENLSSWNGGMIRFRKEDGQI 195 L++ L+ G+ ++P +I V G G Y G S N S + G+ R + Sbjct: 126 LRQHLKKSGSLLAQENPKRPIIHVCFIGPGRAYVGYSF-SNNSSPYFMGIPRLKMAADAP 184 Query: 196 SRAKFKLMEAEKEFA------IPFCSFRNAVDIGASPGGWTSFLLERGLKVTAVDPALMH 249 SR+ KL EA +F + S NAVD+GA PGGWT L+ RG+ V+AVD M+ Sbjct: 185 SRSSLKLDEAFAQFVPKEEQEVRVRSGMNAVDLGACPGGWTYQLVRRGMMVSAVDNGPMN 244 Query: 250 ESLRKNPGLKILRKNAGDVKFQDNEFDLLVCDMSWSPKLMAKLVTGLLHSLSPGG---TA 306 E L + +K R++ + Q LVCDM P +A+L+ + + G A Sbjct: 245 EKLMETGQVKHFREDGFRFEPQRKNIYWLVCDMVEKPARVAELI----EAWAINGWFKEA 300 Query: 307 IVTVKL----MHKKPMAVI---KEIIAMFESERMQIQRAKQLFHNRDEITLYM 352 I +KL +K+ MA++ +EI+ Q+Q K L+H+RDE+T+++ Sbjct: 301 IFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQ-CKHLYHDRDEVTVHL 352 >gb|EAJ57632.1| unknown [environmental sequence] Length = 361 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 26/234 (11%) Query: 138 LQERLQDLGAEFTVQDPAWVI--SVYADGGALYAGVSRPEENLSSWNGGMIRFRKEDGQI 195 L++ L+ G+ ++P I + G Y G S N S + G+ R + Sbjct: 126 LRQHLKKSGSLLAQENPKRPIIHVCFVGPGRAYVGYSF-SNNSSPYFMGIPRLKMAADAP 184 Query: 196 SRAKFKLMEAEKEFAIP-------FCSFRNAVDIGASPGGWTSFLLERGLKVTAVDPALM 248 SR+ KL EA +F +P S NAVD+GA PGGWT L+ RG+ V+AVD M Sbjct: 185 SRSSLKLDEAFAQF-VPKEAQEERVRSGMNAVDLGACPGGWTYQLVRRGMMVSAVDNGPM 243 Query: 249 HESLRKNPGLKILRKNAGDVKFQDNEFDLLVCDMSWSPKLMAKLVTGLLHSLSPGG---T 305 +E L + +K R++ + Q LVCDM P +A+L+ + + G Sbjct: 244 NEKLMETGQVKHFREDGFRFEPQRKNIYWLVCDMVEKPARVAELI----EAWAINGWFKE 299 Query: 306 AIVTVKL----MHKKPMAVI---KEIIAMFESERMQIQRAKQLFHNRDEITLYM 352 AI +KL +K+ MA++ +EI+ Q+Q K L+H+RDE+T+++ Sbjct: 300 AIFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQ-CKHLYHDRDEVTVHL 352 >gb|EAH17246.1| unknown [environmental sequence] Length = 198 Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 20/192 (10%) Query: 176 ENLSSWNGGMIRFRKEDGQISRAKFKLMEAEKEFAIP-------FCSFRNAVDIGASPGG 228 EN S G++R + + SR+ KL EA +F IP NAVD+GA PGG Sbjct: 5 ENNSPLENGIMRLKFPNEAPSRSTLKLEEAFLQF-IPKHEWDKRLAGGMNAVDLGACPGG 63 Query: 229 WTSFLLERGLKVTAVDPALMHESLRKNPGLKILRKNAGDVKFQDNEFDLLVCDMSWSPKL 288 WT L++R + VTA+D M ESL + ++ L + + Q LVCDM P+ Sbjct: 64 WTYQLVKRSMMVTAIDNGPMAESLMETGQVRHLTVDGFKFEPQKKNVYWLVCDMIEQPQR 123 Query: 289 MAKLVTGLLHSLSPGGTAIVTVKLMHKKPMAVIKEIIAMFESE--------RMQIQRAKQ 340 +A+ + L + T I +KL KK + EI+ FE R+Q+ K Sbjct: 124 VAERIGDWLINGWCQET-IFNLKLPMKKRYETVTEILEQFEQRLTEAGIKFRLQV---KH 179 Query: 341 LFHNRDEITLYM 352 L+H+R+E+T+++ Sbjct: 180 LYHDREEVTVHV 191 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.136 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 536,811,906 Number of extensions: 21832656 Number of successful extensions: 53087 Number of sequences better than 1.0e-05: 52 Number of HSP's gapped: 53149 Number of HSP's successfully gapped: 52 Length of query: 355 Length of database: 757,237,578 Length adjustment: 127 Effective length of query: 228 Effective length of database: 412,420,005 Effective search space: 94031761140 Effective search space used: 94031761140 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)