BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0472.0045.p
         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_692633.1| hypothetical protein OB1712 [Oceanobacillus ihe...    60   2e-08

>ref|NP_692633.1| hypothetical protein OB1712 [Oceanobacillus iheyensis HTE831]
 dbj|BAC13668.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
          Length = 118

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 5   ILNQIGAVFIPVSDIERSKNWYCRLLGLPLDGEVLFGHLYVIPMQGPGIVLDSRIFTASA 64
           +   IG V + V+D+++S  WY ++LG P         ++     G G++LD        
Sbjct: 3   LFKGIGDVVLHVNDLQQSAEWYAKILGKPKPKVNTSHPVHWFESGGRGMLLDDNRNNPDY 62

Query: 65  VLKVPSFHLNTEDIDAAYDFVKESGAELLTDIEHD---HWFNFKDPDGNVLMIC 115
           V   PSF L TEDID AY ++KE+   +  +I  D    +F F D D N++M+C
Sbjct: 63  VR--PSFMLLTEDIDKAYGWIKENDGIIEREIARDDMVSFFVFSDMDKNMVMVC 114


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.325    0.144    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 186,201,830
Number of extensions: 7251717
Number of successful extensions: 15577
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 15581
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 757,237,578
Length adjustment: 82
Effective length of query: 35
Effective length of database: 534,599,460
Effective search space: 18710981100
Effective search space used: 18710981100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 120 (50.8 bits)