BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0037.p (425 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00106288.1| hypothetical protein [Nostoc punctiforme] 473 e-132 ref|NP_486499.1| hypothetical protein [Nostoc sp. PCC 7120] >gi|... 471 e-131 ref|NP_965567.1| hypothetical protein LJ1761 [Lactobacillus john... 470 e-131 ref|ZP_00046357.1| hypothetical protein [Lactobacillus gasseri] 460 e-128 ref|ZP_00160200.1| hypothetical protein Avar315601 [Anabaena var... 385 e-105 >ref|ZP_00106288.1| hypothetical protein [Nostoc punctiforme] Length = 442 Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust. Identities = 226/415 (54%), Positives = 305/415 (73%), Gaps = 1/415 (0%) Query: 1 VNSLTAGVVPRIGLEHIAVGRRPEVESILRDMENIAEGGAAFKLITGKFGSGKSFLLQII 60 +NSL AGVVPR+G+E+IAVGR E++S+L+++++IAEG AAF+ I G +GSGKSFLLQ+I Sbjct: 15 INSLGAGVVPRVGVEYIAVGREKELKSLLQNLDDIAEGVAAFRFIIGNYGSGKSFLLQLI 74 Query: 61 RNYAMDRDFVVADADLSPERRLVGTKGQGLATYRELMSHLSTRTRPDGGALEMILQKWII 120 RN AM++ FVVADADLS ERRL G+ +G+ATYRELMSHL+T+TRPDGGAL IL+ WI Sbjct: 75 RNRAMEQGFVVADADLSSERRLAGSNNEGVATYRELMSHLATKTRPDGGALVSILEGWIN 134 Query: 121 SLQQAVMQEKGCGPDAPQLGQEVEQRIYSVASEMRGLVHGFDFAKVLATYWNGHKLADDG 180 +QQ V++E P+ +VE +I V + GLVHGFDF V+ YW G+++ DD Sbjct: 135 KIQQEVVKETEMRPNDDGFDDQVESKIREVVQYIEGLVHGFDFGSVIIAYWRGYRMDDDN 194 Query: 181 LKQDALRWLRGEFATRTEARKALGVGVIIDDDNWYDYMKLWAEFIGSIGYKGLLLFIDEG 240 LK A+RWLRGEF T+ EA+ ALGV VIIDDD+WYDY+KL+A+F+ IGYKGLL+ +DE Sbjct: 195 LKNAAMRWLRGEFTTKVEAKAALGVRVIIDDDSWYDYIKLFAKFVAEIGYKGLLILVDEA 254 Query: 241 VNLYKITNSISRQSNYEKLLTMFNDTMQGKAERLGIFIGGTPQFVEDNRRGLFSYEALRS 300 V+LY+I+ +++R+ NY +LL MFNDTMQ KAE LGI +GGT +F+ED +RGLF+ +A + Sbjct: 255 VHLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVVGGTTKFLEDPKRGLFADQAWQR 314 Query: 301 RLVAGRY-GGTGLNNFTGPIIALEMLSHEEILVLLQKLRDIHALHYGYEAKLTQEQLVHF 359 R R+ + +GP+I L LS EIL LLQ+L +IHAL++GYE LT +L F Sbjct: 315 RTKESRFVAQANVQENSGPVIRLNPLSEAEILTLLQRLAEIHALNFGYEQTLTNRELKEF 374 Query: 360 MEEAVGRLGADELLTAREVVRDFMDLLHTLHQHPDMSFEKLVGERTAKPAEAETN 414 ++E + RLGA+ LLT E+VRDFM +L+ LHQ+P + F +L+ KP N Sbjct: 375 VQEIINRLGAEALLTPGEIVRDFMSVLNILHQNPGIVFAELIHGSKFKPTAMGKN 429 >ref|NP_486499.1| hypothetical protein [Nostoc sp. PCC 7120] pir||AD2113 hypothetical protein all2459 [imported] - Nostoc sp. (strain PCC 7120) dbj|BAB74158.1| ORF_ID:all2459~hypothetical protein [Nostoc sp. PCC 7120] Length = 442 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 227/410 (55%), Positives = 301/410 (73%), Gaps = 1/410 (0%) Query: 1 VNSLTAGVVPRIGLEHIAVGRRPEVESILRDMENIAEGGAAFKLITGKFGSGKSFLLQII 60 +NSL AGVVPR+G+EHIAVGR E++S+L+++++IAEG AAF+ I G +G+GKSF+LQ++ Sbjct: 15 INSLGAGVVPRLGVEHIAVGREKELKSLLQNLDDIAEGVAAFRFIIGNYGAGKSFILQMV 74 Query: 61 RNYAMDRDFVVADADLSPERRLVGTKGQGLATYRELMSHLSTRTRPDGGALEMILQKWII 120 RN AM++ FVV D DLS E RL G+ +GLATYRELMS LST+TRPDGGAL IL+ WI Sbjct: 75 RNRAMEQGFVVGDVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRPDGGALVSILEGWIN 134 Query: 121 SLQQAVMQEKGCGPDAPQLGQEVEQRIYSVASEMRGLVHGFDFAKVLATYWNGHKLADDG 180 +QQ V++E P+ +VE +I V + LVHGFDF ++ YW G++L DD Sbjct: 135 KIQQEVVKETQLRPNDEGFDDQVEAKIREVVQYIEDLVHGFDFGSIIVAYWRGYRLDDDD 194 Query: 181 LKQDALRWLRGEFATRTEARKALGVGVIIDDDNWYDYMKLWAEFIGSIGYKGLLLFIDEG 240 LK ALRWLRGEF T+TEAR ALGV VIIDDD+WYDY+KL A+F+ IGYKGLL+ +DE Sbjct: 195 LKNSALRWLRGEFNTKTEARTALGVRVIIDDDSWYDYIKLLAKFVAEIGYKGLLILMDEA 254 Query: 241 VNLYKITNSISRQSNYEKLLTMFNDTMQGKAERLGIFIGGTPQFVEDNRRGLFSYEALRS 300 VNLY+I+ +++R+ NY +LL MFNDTMQ KAE LGI IGGT +F+ED RGLF+ +A R Sbjct: 255 VNLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLEDPNRGLFADQAWRR 314 Query: 301 RLVAGRY-GGTGLNNFTGPIIALEMLSHEEILVLLQKLRDIHALHYGYEAKLTQEQLVHF 359 R R+ + + F GP+I L LS EIL LLQ+L +IHALH+GY+ LT ++L F Sbjct: 315 RTKESRFVQQSDIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHFGYDKILTNKELQEF 374 Query: 360 MEEAVGRLGADELLTAREVVRDFMDLLHTLHQHPDMSFEKLVGERTAKPA 409 ++E VGRLGA+ LLT E+VRDF+ +L+ LH + ++ F +LV + KP Sbjct: 375 VKEIVGRLGAEALLTPGEIVRDFISVLNILHHNQNIKFSELVHSSSFKPT 424 >ref|NP_965567.1| hypothetical protein LJ1761 [Lactobacillus johnsonii NCC 533] gb|AAS09533.1| hypothetical protein LJ1761 [Lactobacillus johnsonii NCC 533] Length = 444 Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust. Identities = 225/425 (52%), Positives = 305/425 (71%), Gaps = 2/425 (0%) Query: 1 VNSLTAGVVPRIGLEHIAVGRRPEVESILRDMENIAEGGAAFKLITGKFGSGKSFLLQII 60 +NSL GVVPRIGL +I VGR+ EVE++L D+E I +GGA+F+ I G++GSGKSFLLQ I Sbjct: 18 LNSLKGGVVPRIGLPYITVGRKAEVEALLHDVELIKDGGASFRFIVGRYGSGKSFLLQTI 77 Query: 61 RNYAMDRDFVVADADLSPERRLVGTKGQGLATYRELMSHLSTRTRPDGGALEMILQKWII 120 RNY MD++FVV D DLSPERRL G KGQGLATYREL+ +LST+TRP+GGAL +IL +WI Sbjct: 78 RNYVMDKNFVVVDGDLSPERRLQGGKGQGLATYRELIQNLSTKTRPEGGALTLILDRWIN 137 Query: 121 SLQQAVMQEKGCGPDAPQLGQEVEQRIYSVASEMRGLVHGFDFAKVLATYWNGHKLADDG 180 S+Q V E G D P V ++IY+V S + LVHGFDFAK+L Y+ + D+ Sbjct: 138 SVQMQVRTETGLNDDTPAFEDAVNKKIYAVISNLSELVHGFDFAKLLEMYYQAYINDDEE 197 Query: 181 LKQDALRWLRGEFATRTEARKALGVGVIIDDDNWYDYMKLWAEFIGSIGYKGLLLFIDEG 240 K ++W RGE+A +T+A+K LGV ++I DD+WY+Y+KL+A F GY GL++ IDE Sbjct: 198 TKAKVVKWFRGEYANKTQAKKELGVDIVISDDDWYEYLKLFASFFRQAGYAGLMIMIDEL 257 Query: 241 VNLYKITNSISRQSNYEKLLTMFNDTMQGKAERLGIFIGGTPQFVEDNRRGLFSYEALRS 300 VN+YKI NSISRQ NYEK+LTM+ND +QGK++ LGI +GGTPQ +ED RRG++SYEALRS Sbjct: 258 VNIYKIPNSISRQYNYEKILTMYNDALQGKSKYLGIIMGGTPQAIEDKRRGVYSYEALRS 317 Query: 301 RLVAGRYGGTGLNNFTGPIIALEMLSHEEILVLLQKLRDIHALHYGYEAKLTQEQLVHFM 360 RL +G++ G + P+I L+ L+ EE+LVL +KL ++HA YGYE +T++ L F+ Sbjct: 318 RLASGKFSEAGNRDMYAPVIKLDPLTPEEMLVLTEKLAEMHANLYGYEKTITEDDLQKFI 377 Query: 361 EEAVGRLGADELLTAREVVRDFMDLLHTLHQHPDMSFEKLVGERTAKPAEAE--TNELDG 418 + R+GA +T RE++RDF++LL + Q+P+ EKL+ AE+E +NE Sbjct: 378 KIEYSRVGASTNITPREIIRDFIELLDIVWQNPETDVEKLLNSDKFSYAESEAVSNEKSD 437 Query: 419 FLAEF 423 AEF Sbjct: 438 DFAEF 442 >ref|ZP_00046357.1| hypothetical protein [Lactobacillus gasseri] Length = 444 Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust. Identities = 219/425 (51%), Positives = 302/425 (71%), Gaps = 2/425 (0%) Query: 1 VNSLTAGVVPRIGLEHIAVGRRPEVESILRDMENIAEGGAAFKLITGKFGSGKSFLLQII 60 +NSL GVVPRIGL +I VGR+ E+E++L D+E I GGA+F+ I G++GSGKSFLLQ I Sbjct: 18 LNSLKGGVVPRIGLPYITVGRKAEIEALLHDVELIENGGASFRFIVGRYGSGKSFLLQTI 77 Query: 61 RNYAMDRDFVVADADLSPERRLVGTKGQGLATYRELMSHLSTRTRPDGGALEMILQKWII 120 RNY MD++FVV D DLSPERRL G KGQGLATYREL+ +LST+TRP+GGAL +IL +WI Sbjct: 78 RNYVMDKNFVVVDGDLSPERRLQGGKGQGLATYRELIQNLSTKTRPEGGALTLILDRWIN 137 Query: 121 SLQQAVMQEKGCGPDAPQLGQEVEQRIYSVASEMRGLVHGFDFAKVLATYWNGHKLADDG 180 S+Q V + D P + V ++IY+V S + LVHGFDFAK+L Y+ + D+ Sbjct: 138 SVQMQVATDTNLNADDPAFEEAVNKKIYAVISSLSELVHGFDFAKLLKMYYQAYINNDEE 197 Query: 181 LKQDALRWLRGEFATRTEARKALGVGVIIDDDNWYDYMKLWAEFIGSIGYKGLLLFIDEG 240 K ++W RGE+ +T+A+K LGV ++I DD+WY+Y+KL+A F GY GL++ IDE Sbjct: 198 TKAKVIKWFRGEYENKTQAKKELGVDIVISDDDWYEYLKLFASFFRQAGYAGLMIMIDEL 257 Query: 241 VNLYKITNSISRQSNYEKLLTMFNDTMQGKAERLGIFIGGTPQFVEDNRRGLFSYEALRS 300 VN+YKI NSISRQ NYEK+LTM+ND +QGK++ LGI + GTPQ VED RRG++SYEALRS Sbjct: 258 VNIYKIPNSISRQYNYEKILTMYNDALQGKSKYLGIIMCGTPQAVEDKRRGVYSYEALRS 317 Query: 301 RLVAGRYGGTGLNNFTGPIIALEMLSHEEILVLLQKLRDIHALHYGYEAKLTQEQLVHFM 360 RL +G++ G + P+I L+ L+ EE+LVL +KL D+HA YGYE +T++ L F+ Sbjct: 318 RLASGKFSEAGNRDMYAPVIKLDPLTPEEMLVLAEKLADMHAHLYGYERTITEDDLEKFI 377 Query: 361 EEAVGRLGADELLTAREVVRDFMDLLHTLHQHPDMSFEKLVGER--TAKPAEAETNELDG 418 + R+GA +T RE++RDF++LL + Q+P + E+L+ + +EA ++E Sbjct: 378 KIEYSRVGASSNITPREIIRDFIELLDIVWQNPKTNIEQLLNSDKFSYTESEAVSDEKSD 437 Query: 419 FLAEF 423 AEF Sbjct: 438 NFAEF 442 >ref|ZP_00160200.1| hypothetical protein Avar315601 [Anabaena variabilis ATCC 29413] Length = 364 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 65 MDRDFVVADADLSPERRLVGTKGQGLATYRELMSHLSTRTRPDGGALEMILQKWIISLQQ 124 M++ FVVAD DLS E RL G+ +GLATYRELMS LST+TRPDGGAL IL+ WI +QQ Sbjct: 1 MEQGFVVADVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRPDGGALVSILEGWINKIQQ 60 Query: 125 AVMQEKGCGPDAPQLGQEVEQRIYSVASEMRGLVHGFDFAKVLATYWNGHKLADDGLKQD 184 V++E P+ +VE +I V + LVHGFDF ++ YW G++L DD LK Sbjct: 61 EVVKETELRPNDEGFDDQVEAKIREVVQYIEDLVHGFDFGSIIIAYWRGYRLDDDDLKNS 120 Query: 185 ALRWLRGEFATRTEARKALGVGVIIDDDNWYDYMKLWAEFIGSIGYKGLLLFIDEGVNLY 244 ALRWLRGEF T+TEAR ALGV +IIDDD+WYDY+KL A+F+ IGYKGLL+ +DE VNLY Sbjct: 121 ALRWLRGEFNTKTEARTALGVRIIIDDDSWYDYIKLLAKFVAEIGYKGLLILMDEAVNLY 180 Query: 245 KITNSISRQSNYEKLLTMFNDTMQGKAERLGIFIGGTPQFVEDNRRGLFSYEALRSRLVA 304 +I+ +++R+ NY +LL MFNDTMQ KAE LGI IGGT +F+ED RGLF+ +A R R Sbjct: 181 QISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLEDPNRGLFADQAWRRRTKE 240 Query: 305 GRYGGTG-LNNFTGPIIALEMLSHEEILVLLQKLRDIHALHYGYEAKLTQEQLVHFMEEA 363 R+ + F GP+I L LS EIL LLQ+L +IHALH+GY+ LT ++L F++E Sbjct: 241 SRFAAQADIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHFGYDKILTNKELQEFVKEI 300 Query: 364 VGRLGADELLTAREVVRDFMDLLHTLHQHPDMSFEKLVGERTAKPA 409 V RLGA+ LLT E+VRDF+ +L+ LH + ++ F +L+ + KP Sbjct: 301 VSRLGAEALLTPGEIVRDFISVLNILHHNQNIKFSELIHGSSFKPT 346 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.139 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 639,952,623 Number of extensions: 27394985 Number of successful extensions: 67416 Number of sequences better than 1.0e-05: 17 Number of HSP's gapped: 67396 Number of HSP's successfully gapped: 17 Length of query: 425 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 297 Effective length of database: 409,704,906 Effective search space: 121682357082 Effective search space used: 121682357082 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)