BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0470.0020.p
         (1266 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_691723.1| hypothetical protein OB0802 [Oceanobacillus ihe...   169   5e-40
gb|EAI60553.1| unknown [environmental sequence]                       143   3e-32
gb|EAJ18137.1| unknown [environmental sequence]                       140   2e-31
gb|EAC28777.1| unknown [environmental sequence]                       132   5e-29
gb|EAF79725.1| unknown [environmental sequence]                       126   4e-27

>ref|NP_691723.1| hypothetical protein OB0802 [Oceanobacillus iheyensis HTE831]
 dbj|BAC12758.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
          Length = 542

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 192/390 (49%), Gaps = 16/390 (4%)

Query: 586 SDMPEYVRIYVTEDMKTTQSIVWKTAPRVERGVIQYVEASKFTGFDQPNIKEQTAEPQLL 645
           S +P+ V +    D  TTQS+ W+T   V   V +   A +   F   N     AE    
Sbjct: 52  SPVPDRVLLGWEGDTATTQSVSWRTDESVTSPVAEIAVAEEGPNF-TSNTSTIEAETSEE 110

Query: 646 LAPDRVGETLFHKGMLQSLSPGTEYIYRVGSPGLWSEQHRFTTESANPEAFSFLFVTDSH 705
           +  +    + +H    + L P T+Y+YRVG    WSE + FTT S   E FSF+++ D+ 
Sbjct: 111 IEANLGYTSQYHTVNFEGLEPDTQYLYRVGDGANWSEWYEFTTASEEDEPFSFIYMGDAQ 170

Query: 706 TNTEEAYHIHQNLLSSAFTSYPDARFVMHGGDIVDDGGIMNEWEQDMKASQLYSGSVPSA 765
            + +E +     ++ SA++   +A F++H GD+++ G    +W +  +++   +G +PS 
Sbjct: 171 NDIKEHW---SRVMRSAYSDLSEASFIVHAGDMINHGDADEQWGEWYESAGWINGMIPSI 227

Query: 766 YTMGNHD---VKNGGK---EVFRTALGLPGNGMPGQEQLTYSYDYEDTHFIVLNSEADEV 819
            T GNH+   + NG     E F      PGNG  G E+    +DY+D   I L+S    V
Sbjct: 228 ATAGNHEYYRITNGPNTLSEYFGPQFAYPGNGPEGLEEQVGYWDYQDMRIISLDSNTGHV 287

Query: 820 DMQKQAEWLRGNLQASSKKWNIAMFHRPAYHTEDGRGPELVTKYLAPVLEELGADLVLVG 879
           D+ +QAEWL   L+ +  KW +  FH P + + +GR    + + + PV+E+   DL+  G
Sbjct: 288 DIDQQAEWLDEVLENNPNKWTVITFHHPIFSSGEGRDNVALREAVLPVIEKHNVDLIFQG 347

Query: 880 HDHALAWTYPMKNGQPIKDGSPGTVYLSGGSSGWKFYDAVKFDYLE---YLYD--DNFPV 934
           HDH  A  +        K+ S GT++++   SG K Y+  +  + E   Y+    ++  +
Sbjct: 348 HDHTYARGHLSNEEDGEKEYSTGTMFVN-SVSGPKMYNRSEVVWEENNAYVRSGAEDTQM 406

Query: 935 YSAITIGKDQILIEARKADGEQLQALTIEK 964
           Y  I +  D++  E+  A GE     T+ K
Sbjct: 407 YQHIYVDGDELKYESYNALGEIYDEFTMTK 436


>gb|EAI60553.1| unknown [environmental sequence]
          Length = 367

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 151/330 (45%), Gaps = 29/330 (8%)

Query: 656 FHKGMLQSLSPGTEYIYRVGSPGLWSEQHRFTTESANPEAFSFLFVTDSHTNTEEAYHIH 715
           +H      L P T Y YRVG    WSE  +FTT     E FSFL+V D+       Y + 
Sbjct: 35  YHSVTFTDLEPNTTYAYRVGDGKHWSEWIQFTTAYKTNEPFSFLYVGDAQN---YIYDLW 91

Query: 716 QNLLSSAFTSYPDARFVMHGGDIVDDGGIMNEWEQDMKASQLYSGSVPSAYTMGNH---- 771
             L+   +   P+A F++H GD+VDD     EW +   A      ++PS    GNH    
Sbjct: 92  SRLIREGYKKAPEASFILHAGDLVDDAHNEEEWHEWFAAGGWIHRTLPSLAVPGNHEYRP 151

Query: 772 ----DVKNGGKEV---FRTALGLPGNGMPGQEQLTYSYDYEDTHFIVLNSEADEVDMQKQ 824
               D+    K +   +     LP NG+ G  +  Y  DY+   FI LNS    V +++Q
Sbjct: 152 LYQKDIPIRKKTLSIQWNHQFTLPNNGVSGLLETNYFLDYQGVRFIALNSN---VKIEEQ 208

Query: 825 AEWLRGNLQASSKKWNIAMFHRPAYHTEDGRGPELVTKYLAPVLEELGADLVLVGHDHAL 884
            EWL   L+ +  KW IA FH P Y     R      K   P+ ++ G DL L GHDHA 
Sbjct: 209 TEWLETVLKNNPHKWTIAFFHHPLYSATTKRDYPERRKRWKPLFDKYGVDLALQGHDHAY 268

Query: 885 A------WTYPMKNGQPIKDGSPGTVYLSGGSSGWKFYDAV----KFDYLEYLYDDNFPV 934
           A      +   +  G  +KD + GTVY+    SG K YDA     +++   Y   +N  +
Sbjct: 269 ARGSESLYEKNLITGTNVKDAT-GTVYVV-SVSGPKHYDAKPDWDQYEPTRYKAGENKQL 326

Query: 935 YSAITIGKDQILIEARKADGEQLQALTIEK 964
           +  I+I  +++  ++  A G+   +  + K
Sbjct: 327 FQVISIDGNKLSYKSYTAIGDLFDSFELIK 356


>gb|EAJ18137.1| unknown [environmental sequence]
          Length = 403

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 154/350 (44%), Gaps = 38/350 (10%)

Query: 597 TEDMKTTQSIVWKTAPRVERGVIQYVEAS---KFTGFDQPNIKEQTAEPQL------LLA 647
           ++D  TT S+ W+T+  + +G  +  EA    KF   +      +T+  +        L 
Sbjct: 1   SDDPATTVSVTWRTSREINKGFGEIAEAKADPKFV-LESERFIAKTSNLRYSNVVNHYLN 59

Query: 648 PDRVGETL---FHKGMLQSLSPGTEYIYRVGSPGLWSEQHRFTTESANPEAFSFLFVTDS 704
             +   TL   +H      L P T Y YRVG    WSE  +FTT     E FSFLFV D+
Sbjct: 60  TKKSFNTLNHNYHSVTFTGLKPNTTYAYRVGDGERWSEWIQFTTAHKTNEPFSFLFVGDA 119

Query: 705 HTNTEEAYHIHQNLLSSAFTSYPDARFVMHGGDIVDDGGIMNEWEQDMKASQLYSGSVPS 764
                  Y +   L+  ++   P+A F++H GD++DD     EW +   A      ++PS
Sbjct: 120 QN---YIYDLWSRLIRESYKKAPEASFILHAGDLIDDAHNEEEWHEWFAAGGWIHRTLPS 176

Query: 765 AYTMGNH--------DVKNGGKEV---FRTALGLPGNGMPGQEQLTYSYDYEDTHFIVLN 813
               GNH        D+    K +   +     LP NG+    +  Y  DY+   FI LN
Sbjct: 177 LAVPGNHEYRPLYQKDIPIRKKTLSIQWNHQFTLPNNGISELLETNYFLDYQGVRFIALN 236

Query: 814 SEADEVDMQKQAEWLRGNLQASSKKWNIAMFHRPAYHTEDGRGPELVTKYLAPVLEELGA 873
           S    V + +Q EWL   L+ +  KW IA FH P Y     R      K   P+ ++ G 
Sbjct: 237 SN---VMIDEQMEWLETVLKNNPHKWTIAFFHHPLYSATTKRDYPERRKRWKPLFDKYGV 293

Query: 874 DLVLVGHDHALA------WTYPMKNGQPIKDGSPGTVYLSGGSSGWKFYD 917
           DL L GHDH  A      +   +  G  IKD + GTVY+    SG K YD
Sbjct: 294 DLALQGHDHTYARGSESLYEKNLLTGTNIKDAT-GTVYVV-SVSGPKQYD 341


>gb|EAC28777.1| unknown [environmental sequence]
          Length = 285

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 16/243 (6%)

Query: 653 ETLFHKGMLQSLSPGTEYIYRVGSPGLWSEQHRFTTESANPEAFSFLFVTDSHTNTEEAY 712
           E+ F +  ++ L P T Y YRVG+    SE H+FTT +      SFL+V D+     + +
Sbjct: 47  ESSFFEVKIEGLKPNTLYAYRVGNNKFKSEWHQFTTANDKESPISFLYVGDAQNYILDLW 106

Query: 713 HIHQNLLSSAFTSYPDARFVMHGGDIVDDGGIMNEWEQDMKASQLYSGSVPSAYTMGNHD 772
                ++  A+   PDA F +H GD+VD     +EW +   A       +P+    GNH+
Sbjct: 107 ---SRVIRKAYKVSPDADFFIHAGDLVDKAHSESEWNEWFAAGSFIHSEIPAIAVPGNHE 163

Query: 773 VK--NGGKE--------VFRTALGLPGNGMPGQEQLTYSYDYEDTHFIVLNSEADEVDMQ 822
            +  + G++         +R    LP NG    E+  Y  DY +   I LNS    V ++
Sbjct: 164 YQRTDSGQQGLGRVLSLQWRPQFSLPKNGPKSLEETCYYLDYPNLRIIALNSN---VKIK 220

Query: 823 KQAEWLRGNLQASSKKWNIAMFHRPAYHTEDGRGPELVTKYLAPVLEELGADLVLVGHDH 882
            QA+WLR  L  + KKW +  +H P +    GR    + K+  P+ +E   DL L GHDH
Sbjct: 221 LQAKWLRNILAENDKKWTVVTYHHPIFSASTGRDNSELRKHWKPLFDEYQVDLALQGHDH 280

Query: 883 ALA 885
             A
Sbjct: 281 TYA 283


>gb|EAF79725.1| unknown [environmental sequence]
          Length = 262

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 16/265 (6%)

Query: 602 TTQSIVWKTAPRVERGVIQYVEASKFTGFDQPNIKEQTAEPQLLLAPDRVGETLFHKGML 661
           TTQS+ W+T+P V     +   A     F + +++ +     L      + E  FH    
Sbjct: 1   TTQSVTWRTSPAVNVAYAEVAVAEAGPTFPEKSMRHRAQTESL---KTDLNEAHFHSVTF 57

Query: 662 QSLSPGTEYIYRVGSPGLWSEQHRFTTESANPEAFSFLFVTDSHTNTEEAYHIHQNLLSS 721
           +SL+PGT Y YRVG    WSE  +F+T +A P  FSF++  D+  N    +     ++  
Sbjct: 58  ESLTPGTRYAYRVGDGTNWSEWFQFSTATATPMPFSFVYFGDAQNNLRSLW---SRVIRE 114

Query: 722 AFTSYPDARFVMHGGDIVDDGGIMNEWEQDMKASQLYSGSVPSAYTMGNHDV---KNGGK 778
           A+   P A F++H GD+V+      EW +   A    +  +PS    GNH+    KN   
Sbjct: 115 AYRDAPKAAFLLHAGDLVNRAESDAEWGEWFGAGAWLNAMMPSLAVPGNHEQARDKNKNS 174

Query: 779 EV---FRTALGLPGNGMPGQEQLTYSYDYEDTHFIVLNSEADEVDMQKQAEWLRGNLQAS 835
            +   +R +   P NG  G E+  YS  Y +   I LNS +    ++ QA WL   LQ +
Sbjct: 175 RLSHHWRPSFTFPENGPSGLEETCYSLTYHNLRIIALNSNS---QLETQAAWLDDVLQKN 231

Query: 836 SKKWNIAMFHRPAYHTEDGR-GPEL 859
           +  W +  FH P + T   R  PEL
Sbjct: 232 TSAWTVVTFHHPVFSTGKNRDNPEL 256


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.314    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 1,803,202,359
Number of extensions: 79024454
Number of successful extensions: 134649
Number of sequences better than 1.0e-05: 239
Number of HSP's gapped: 134213
Number of HSP's successfully gapped: 284
Length of query: 1266
Length of database: 757,237,578
Length adjustment: 137
Effective length of query: 1129
Effective length of database: 385,269,015
Effective search space: 434968717935
Effective search space used: 434968717935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 132 (55.5 bits)