BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0462.0007.p (645 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00097378.1| COG0488: ATPase components of ABC transporter... 709 0.0 gb|AAN87505.1| ABC transporter ATP-binding protein Uup [Heliobac... 704 0.0 ref|NP_781799.1| transporter [Clostridium tetani E88] >gi|282032... 654 0.0 ref|NP_563460.1| probable ABC transporter [Clostridium perfringe... 643 0.0 ref|NP_349613.1| ATPase component of ABC transporter, with dupli... 641 0.0 >ref|ZP_00097378.1| COG0488: ATPase components of ABC transporters with duplicated ATPase domains [Desulfitobacterium hafniense] Length = 653 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/650 (54%), Positives = 456/650 (70%), Gaps = 6/650 (0%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN++T E L+KSYG K LF+D S G+++ KIG+IGVNGTGKST LKI+AGL+ PD GQI Sbjct: 1 MNLLTAESLTKSYGIKPLFQDISLGIEEGQKIGIIGVNGTGKSTLLKILAGLEQPDQGQI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 N ++++YL Q P ++P+ TVLQQVF G+ P + +R+Y L L P + + Sbjct: 61 TTNNELQLEYLPQEPDFDPEATVLQQVFKGNSPLMKLLRDYETALERLNQDPNSESYQNT 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+Q+GQ +D+ WQ+ESEAK VLTKLGITQFD + +LSGGQRKRVALA ALI PS +L Sbjct: 121 LLQLGQKMDSHNAWQIESEAKAVLTKLGITQFDIPVGTLSGGQRKRVALAGALIQPSNVL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNHID + V WLE YL K +GALLMVTHDRYFL+RVA+ + ELD G+LY Y NY Sbjct: 181 ILDEPTNHIDNEMVDWLENYLHKLKGALLMVTHDRYFLDRVANRIFELDRGKLYAYPGNY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 SRF N+LR ELAWIRRGAKAR+TKQKARIDRFE+L+ Q Sbjct: 241 SRFLELKAERDEQEEATERKRQNILRNELAWIRRGAKARTTKQKARIDRFEQLQADQPEE 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGR-TLIKDLTYIAVPQDRVGIVGPNGSGKST 359 G +++S + RLG+K+I+ L KS G T+I D + I DR+GI+GPNGSGKST Sbjct: 301 KTGKVEVSAGAARLGKKVIQCSHLRKSYPGSGTVIDDFSIILAKYDRIGIIGPNGSGKST 360 Query: 360 LLNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVIT 419 LLN++AG++ D GE+E G TVKLGYF QE+++ + +VI+ +K AE+I T+DG V+T Sbjct: 361 LLNILAGRMPADAGEIEWGPTVKLGYFAQEYREFEPQTKVIDVIKAVAEVIPTSDGGVLT 420 Query: 420 AGQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVL 479 A QMLERFLF PA QWTP+ KLSGGEKRRLYLL+VLM +PNVLLLDEPTNDLDI TL++L Sbjct: 421 ASQMLERFLFTPAQQWTPVEKLSGGEKRRLYLLQVLMSSPNVLLLDEPTNDLDIQTLSIL 480 Query: 480 EDYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEYEEWMANNI----P 534 EDYL++FPGVV TVSHDRFFLDR VD+++AFE G I +GNY++Y E +A I Sbjct: 481 EDYLEDFPGVVITVSHDRFFLDRVVDQILAFEGQGRIHFAIGNYTDYREQLARRIAEEQS 540 Query: 535 ARGGDTPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIEQAEQHLA 594 +R + + G+NS E A P +K ++KEQREYE I++ I E L Sbjct: 541 SREALSKTQKLNGQNSRLGEAEAAGHQAKPKERPVKMSYKEQREYEQIEDRIAGLEGQLE 600 Query: 595 DISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKIAGK 644 + M ++ GKL EL++ + E +LE +ERWTYL+ELAE+IAG+ Sbjct: 601 QVDQDMAEEGSNYGKLNELMKAKEDLEKQLEESLERWTYLSELAEEIAGR 650 >gb|AAN87505.1| ABC transporter ATP-binding protein Uup [Heliobacillus mobilis] Length = 676 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/659 (54%), Positives = 467/659 (70%), Gaps = 17/659 (2%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN++ E+L+K+YGEK L +D S G+++ +IG++GVNGTGKSTFLKI+A LD D G + Sbjct: 11 MNLLVAENLTKTYGEKVLLQDVSVGIEEGERIGLVGVNGTGKSTFLKILAQLDKADGGTV 70 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 GNAVRV+YL Q+P ++ TVLQQVF G+ P + +REY + L + P + AL+ R Sbjct: 71 TTGNAVRVEYLPQDPAFDERATVLQQVFKGNSPTMQLLREYEQALERQSADPHNQALQER 130 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+ + Q ++A WQ+E+EAKT+L KLGI + M SLSGGQRKRVALA ALITPSELL Sbjct: 131 LLALSQQMEAKQVWQIEAEAKTILAKLGIKDVSSPMGSLSGGQRKRVALAGALITPSELL 190 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNH+D+++++WLEQYL +RRGALLM+THDRYFL+RV + +LELD G+LY Y+ +Y Sbjct: 191 ILDEPTNHLDSETISWLEQYLLRRRGALLMITHDRYFLDRVVTRILELDKGRLYSYDGHY 250 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 + F NL R ELAWIRRGAKAR+TKQKARIDRFEKL + Sbjct: 251 TEFLAAKAEREEQQRSSEQKRQNLYRNELAWIRRGAKARTTKQKARIDRFEKLVAEKVEL 310 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKSTL 360 +L++ V +TRLGRK+IE+ D+TK + +I +YI +R+GI+GPNG+GKSTL Sbjct: 311 RDESLEMPVGATRLGRKVIELSDVTKEYADQKVIDRFSYIFGRGERIGIIGPNGAGKSTL 370 Query: 361 LNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVITA 420 L LIA +L PD+G VE G TVK+G+F QE+ +M +RVIEY++E AE I + DG VITA Sbjct: 371 LKLIACRLAPDQGSVETGETVKVGWFGQENTEMKHEMRVIEYIREVAEFIPSPDGGVITA 430 Query: 421 GQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVLE 480 QMLERFLFPP +QWTPI +LSGGEKRR+YLL VLMGAPNVL+LDEPTNDLD+ TLAVLE Sbjct: 431 AQMLERFLFPPHLQWTPIGRLSGGEKRRVYLLHVLMGAPNVLILDEPTNDLDVQTLAVLE 490 Query: 481 DYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEYEEWMANNIPA---R 536 DYLD+FPG V VSHDR+FLDR +K+ A + G++ + VGN+++YEE + A R Sbjct: 491 DYLDDFPGTVIAVSHDRYFLDRMAEKIFALKGEGTVNVSVGNFTDYEERLQEEAGAAKDR 550 Query: 537 GGDTPKEAGTGKNSSAPEQGQ--TVPAAP-PAREK----------LKFTFKEQREYEGID 583 + + AG GK G+ TV AA +RE LKFT+KE+ EYE I+ Sbjct: 551 KDEPAQGAGKGKARIEKMDGKSGTVDAAQNDSRENSGTNEKSSRPLKFTYKEKIEYEQIE 610 Query: 584 EAIEQAEQHLADISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKIA 642 E I QAEQ L + ++ AA ++ +LQEL+++Q Q E +E L+ERW YL ELAE+IA Sbjct: 611 EQIAQAEQELQAVREKINAAGSNYVQLQELMQEQSQQELRVEELVERWAYLQELAERIA 669 >ref|NP_781799.1| transporter [Clostridium tetani E88] gb|AAO35736.1| transporter [Clostridium tetani E88] Length = 646 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/654 (50%), Positives = 451/654 (68%), Gaps = 26/654 (3%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN+++VE+LSKSYGEK+L + SF +++ +KIG+IG+NGTGKST LKIIAG+++ D+G I Sbjct: 1 MNLISVENLSKSYGEKSLINNISFSINEGDKIGIIGINGTGKSTLLKIIAGIESYDNGNI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 N + V+YL QNP ++ ++ V+QQVF G + +R+Y L +E P D L+++ Sbjct: 61 ITKNNMVVEYLPQNPYFDENSNVIQQVFKGTSSIMKTIRDYENLLEEVELNPEDETLQKK 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+ + +D WQ+ESEAK +LT GIT F ++++LSGGQ+KR+AL ++L+ P +LL Sbjct: 121 LMDLTSKMDNLNLWQIESEAKAILTTFGITNFYEKVKNLSGGQKKRIALCSSLVNPCDLL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNH+D + ++WLE+YL KR+GAL+M+THDRYFL+RV + + E+ GQLY Y NY Sbjct: 181 ILDEPTNHMDNEIISWLEEYLNKRKGALVMITHDRYFLDRVTNKIFEISKGQLYTYLGNY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 S F NLL+ EL WI+RGAKARSTKQKARIDRF KL E Sbjct: 241 SIFLEKKIEREELERSSEAKRQNLLKRELQWIKRGAKARSTKQKARIDRFNKLSEENIDL 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKSTL 360 ++IS + TRLG+K+IE+KD++ S +TLIKD +YI +P+DR+GIVG NG GKSTL Sbjct: 301 DDNKVEISTSFTRLGKKVIELKDISISFGAKTLIKDFSYIVLPKDRIGIVGSNGLGKSTL 360 Query: 361 LNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVITA 420 + +++G L PD+G +E+G TVK+GYF+QE + + + LRVIEY++E AE I T++GS I+A Sbjct: 361 VKILSGDLIPDKGTIEIGETVKIGYFSQEWKSVQNDLRVIEYIRETAEFITTSNGSKISA 420 Query: 421 GQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVLE 480 QMLERFLF MQW+ I KLSGGEKRRLYLL+VLM APNVLLLDEPTNDLD TL +LE Sbjct: 421 SQMLERFLFTSEMQWSLINKLSGGEKRRLYLLKVLMEAPNVLLLDEPTNDLDTETLTILE 480 Query: 481 DYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSE------------YEE 527 DYL+ F G V +VSHDR+FLD+ DK+ FE NG I+ + GNYSE YEE Sbjct: 481 DYLENFNGSVISVSHDRYFLDKIADKIFVFEGNGIIQKYTGNYSECWEKIKKIKEGDYEE 540 Query: 528 WMANNIPARGGDTPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIE 587 + + + + K + GKN+ + + + LKF++KE+ EYE IDE IE Sbjct: 541 FKKD---LKKDNDNKNSNEGKNAKSRSKDKA----------LKFSYKEKLEYEQIDEVIE 587 Query: 588 QAEQHLADISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKI 641 E+ +A + ++ ++ KLQEL+ ++ E LE MERWTYLNELAEKI Sbjct: 588 GLEERIAKLDEEIAENTSNFQKLQELLNEKEDAEKLLEEKMERWTYLNELAEKI 641 >ref|NP_563460.1| probable ABC transporter [Clostridium perfringens] dbj|BAB82250.1| probable ABC transporter [Clostridium perfringens str. 13] Length = 642 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/649 (51%), Positives = 446/649 (68%), Gaps = 22/649 (3%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN++T+E++SKSY EK L + S G+++ KIG+IGVNGTGKS+FLKI+AG++ PD+G + Sbjct: 1 MNLITLENISKSYSEKILANNISLGINEGEKIGLIGVNGTGKSSFLKIVAGVEEPDEGTV 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALL---ESRPGDSAL 117 GN VR++YLAQ P Y+ + TVL+QVF G+ E+ +REY E L + E + DS Sbjct: 61 TKGNRVRIEYLAQTPDYDDNATVLEQVFKGNSEEMRILREYEELLEKIDKGEVKENDS-- 118 Query: 118 ERRLVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPS 177 RL+++ IDA W +ESEAK VLTKLGIT F+ ++ +LSGGQ+KR+ LAAALITP Sbjct: 119 -ERLIRLQGKIDALNLWDMESEAKNVLTKLGITNFEEKVGNLSGGQKKRIMLAAALITPC 177 Query: 178 ELLILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYE 237 ELLILDEPTNH+D ++++WLE+YL R+GALLM+THDRYFL+RV + +LELD G+L+ Y+ Sbjct: 178 ELLILDEPTNHLDNETISWLEEYLNSRKGALLMITHDRYFLDRVTNRILELDRGRLFSYD 237 Query: 238 ANYSRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQ 297 NYS F NL+R ELAW+RRGAKAR+TKQKAR+ RF++L + Sbjct: 238 GNYSVFLEKKMERIAIEKASEEKRQNLMRKELAWVRRGAKARTTKQKARLQRFDELVNQE 297 Query: 298 GPASAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGK 357 G ++ISV TRLG+KIIE++ L KS + ++ D YI + DR+GIVGPNG GK Sbjct: 298 GFIENENIEISVMGTRLGKKIIEIEHLNKSFGDKKIVDDFNYIVLRSDRIGIVGPNGIGK 357 Query: 358 STLLNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSV 417 STL+ +I GK++PD GE+ G TVK+ F+QE M +R I+Y+KE E ++TA G Sbjct: 358 STLMGMIEGKVKPDSGEIIKGETVKIACFSQEDTHMHPEMRAIDYIKEAGEYLQTATGER 417 Query: 418 ITAGQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLA 477 ITA QM E+FLF +QWT I LSGGE+RRL+LLRVLM APNVLLLDEPTNDLDI TL Sbjct: 418 ITASQMCEKFLFDGTLQWTMIGMLSGGERRRLHLLRVLMEAPNVLLLDEPTNDLDIETLN 477 Query: 478 VLEDYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEY----EEWMANN 532 LEDYLD+F GVV TVSHDR+FLDR +K+ +++ NG I ++ GNY +Y EE + NN Sbjct: 478 RLEDYLDDFGGVVITVSHDRYFLDRICNKIFSYKGNGKIDIYTGNYGDYLLSKEEEIVNN 537 Query: 533 IPARGGDTPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIEQAEQH 592 KE KN P +V + LKF+FKEQRE+E IDE I E+ Sbjct: 538 -------KEKEVAVDKNKKEP----SVDKNKNKGKVLKFSFKEQREFETIDEEIMTLEEK 586 Query: 593 LADISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKI 641 + ++ + M ++ G+LQEL+E++ + E EL ERW YLNELA +I Sbjct: 587 IEELDSLMAKHASEYGRLQELMEEKAKIEEELAFKYERWEYLNELAAQI 635 >ref|NP_349613.1| ATPase component of ABC transporter, with duplicated ATPase domains [Clostridium acetobutylicum] pir||F97270 ATPase component of ABC transporter, with duplicated ATPase domains CAC3012 [imported] - Clostridium acetobutylicum gb|AAK80953.1| ATPase component of ABC transporter, with duplicated ATPase domains [Clostridium acetobutylicum] Length = 632 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/642 (49%), Positives = 435/642 (67%), Gaps = 14/642 (2%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN++T+E++SKSYGEKTL S + + KIG+IG+NGTGKST LKI+ G+ D G I Sbjct: 1 MNLITLENISKSYGEKTLLNKISLSISEGEKIGLIGINGTGKSTLLKILCGIQEYDSGNI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 N++ + YL+QN + + TVL+Q+F G+ E+ +REY L P D +++ Sbjct: 61 ITSNSLSMSYLSQNENFYDNATVLEQIFQGNSKEMNLLREYETALENSAMHPDDEKVQKT 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+ + + +DA W +ES AKT+LTKLGI F+A++++LSGGQ+KR+ LA LITPS LL Sbjct: 121 LLNLTEQMDALDLWNIESNAKTILTKLGIKNFNAKIKTLSGGQKKRICLAQTLITPSNLL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 +LDEPTNH+D +++ WLEQYL + ++ M+THDRYFL+R+++ + EL G LY Y NY Sbjct: 181 VLDEPTNHLDNETIEWLEQYLTSTKSSVFMITHDRYFLDRISNKIFELYNGNLYSYVGNY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 S + NLLR ELAWIRRGAKARSTKQKARI RF++L Sbjct: 241 SVYLEKKLEREQLEISSKQKKDNLLRRELAWIRRGAKARSTKQKARIQRFDELNSQDDTI 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKSTL 360 ++IS + +RLG+K+IE+K+L KS +G IK+ ++I DR+GIVG NG GKSTL Sbjct: 301 IQDKIEISTSGSRLGKKVIEIKNLNKSFNGTEFIKNFSFIFSKGDRIGIVGHNGIGKSTL 360 Query: 361 LNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVITA 420 LN+I GK PD G ++LGATVK+GYF+Q+ +M+++LRVI+Y+KE AE IR ++ +I+A Sbjct: 361 LNIICGKTSPDSGTIDLGATVKIGYFSQDSSNMNENLRVIDYIKEGAEFIRDSNNELISA 420 Query: 421 GQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVLE 480 +MLE+FLF MQWTPI KLSGGE+RRLYLLR+LM APNVL+LDEPTNDLDI TL +LE Sbjct: 421 SKMLEKFLFSSEMQWTPILKLSGGERRRLYLLRILMEAPNVLILDEPTNDLDIQTLTILE 480 Query: 481 DYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEYEEWMANNIPARGGD 539 DYL F G + TVSHDR+FLD+ +KL+ F+ NG I + GNYS+Y E + + Sbjct: 481 DYLQYFEGTILTVSHDRYFLDKLANKLLIFKGNGVIDYNTGNYSDYLEKSKSEEKLEMAN 540 Query: 540 TPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIEQAEQHLADISAQ 599 TP + V + P KLKF+FKEQ EYE ID IE AE L I A+ Sbjct: 541 TPTK-------------NKVKSEKPKSTKLKFSFKEQMEYEKIDSVIEAAENELTSIEAK 587 Query: 600 MEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKI 641 + +A +D L++L+ ++++ E +L+ L +RW YLNELAE+I Sbjct: 588 INSAGSDYMLLEDLMPQKKELEEKLQTLYDRWEYLNELAERI 629 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 916,754,658 Number of extensions: 38738491 Number of successful extensions: 250649 Number of sequences better than 1.0e-05: 9834 Number of HSP's gapped: 241016 Number of HSP's successfully gapped: 13393 Length of query: 645 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 513 Effective length of database: 398,844,510 Effective search space: 204607233630 Effective search space used: 204607233630 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)