BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0459.0025.p (193 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_388173.1| similar to tellurium resistance protein [Bacill... 300 1e-80 ref|NP_782778.1| general stress protein; putative tellurium resi... 276 2e-73 ref|NP_830283.1| Tellurium resistance protein terD [Bacillus cer... 276 2e-73 ref|NP_976842.1| tellurium resistance protein [Bacillus cereus A... 275 4e-73 ref|NP_976841.1| tellurium resistance protein [Bacillus cereus A... 275 6e-73 >ref|NP_388173.1| similar to tellurium resistance protein [Bacillus subtilis] sp|O34384|YCEE_BACSU Hypothetical protein yceE pir||G69756 tellurium resistance protein homolog yceE - Bacillus subtilis dbj|BAA22252.1| YceE [Bacillus subtilis] emb|CAB12085.1| yceE [Bacillus subtilis subsp. subtilis str. 168] Length = 192 Score = 300 bits (768), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 144/190 (75%), Positives = 160/190 (84%) Query: 1 VTISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGEDD 60 + I LSKGQRIDLTKTNPGLTK V+GLGWDTNKYSGG DFDLDASAFL+ + D Sbjct: 1 MAIQLSKGQRIDLTKTNPGLTKAVIGLGWDTNKYSGGHDFDLDASAFLVDAHDNCVNDLD 60 Query: 61 FVFYNNPSGGSGSVTHTGDNRTGEGDGDDEQILVDFSKVPANIQRIGITVTIYDYEARVQ 120 FVFYNN SG V HTGDNRTGEGDGDDEQI+VDFSK+PA+I++IGITVTI+D EAR Q Sbjct: 61 FVFYNNLEHPSGGVIHTGDNRTGEGDGDDEQIIVDFSKIPAHIEKIGITVTIHDAEARSQ 120 Query: 121 NFGQVSNAFVRVVDASSDREILRFDLGEDFSTETAVVFCEFYRHGADWKFQAVGSGFAGG 180 NFGQVSNAFVRVVD + E+LRFDLGEDFS ETAVV CE YRHG +WKF A+GSGF+GG Sbjct: 121 NFGQVSNAFVRVVDEETQNELLRFDLGEDFSIETAVVVCELYRHGGEWKFNAIGSGFSGG 180 Query: 181 LSALCRNYGL 190 L+ALCRNYGL Sbjct: 181 LAALCRNYGL 190 >ref|NP_782778.1| general stress protein; putative tellurium resistance protein [Clostridium tetani E88] gb|AAO36715.1| general stress protein; putative tellurium resistance protein [Clostridium tetani E88] Length = 192 Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 128/190 (67%), Positives = 158/190 (83%) Query: 1 VTISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGEDD 60 ++I+L KGQ+I+LTK NPGL K ++GLGWDTNKYSGG +FDLDASAFL+ +GK + + Sbjct: 1 MSINLKKGQKINLTKDNPGLNKAIIGLGWDTNKYSGGYEFDLDASAFLVGNNGKVNDDLN 60 Query: 61 FVFYNNPSGGSGSVTHTGDNRTGEGDGDDEQILVDFSKVPANIQRIGITVTIYDYEARVQ 120 FVFYNN SG+V HTGDNRTG+GDGDDEQI++DFSKVP++I +I ITVTI++ E R Q Sbjct: 61 FVFYNNLQDPSGAVVHTGDNRTGDGDGDDEQIIIDFSKVPSDIDKIAITVTIHEAEERGQ 120 Query: 121 NFGQVSNAFVRVVDASSDREILRFDLGEDFSTETAVVFCEFYRHGADWKFQAVGSGFAGG 180 NFGQVSNAFVR+V+ +D EILR+DL EDFS ETA+VFCE YR+ DWKF A+GSGF+GG Sbjct: 121 NFGQVSNAFVRIVNEETDVEILRYDLSEDFSIETALVFCELYRNNGDWKFSAIGSGFSGG 180 Query: 181 LSALCRNYGL 190 L ALC+NY L Sbjct: 181 LEALCKNYSL 190 >ref|NP_830283.1| Tellurium resistance protein terD [Bacillus cereus ATCC 14579] gb|AAP07484.1| Tellurium resistance protein terD [Bacillus cereus ATCC 14579] Length = 192 Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 132/192 (68%), Positives = 147/192 (76%) Query: 1 VTISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGEDD 60 + I L KGQ+IDL KT+PGLTK V+GLGWD Y GG DFDLDASAFLL +GK E D Sbjct: 1 MVIQLQKGQKIDLGKTSPGLTKAVIGLGWDIKSYDGGADFDLDASAFLLDANGKCTKETD 60 Query: 61 FVFYNNPSGGSGSVTHTGDNRTGEGDGDDEQILVDFSKVPANIQRIGITVTIYDYEARVQ 120 F+FYNN GSV HTGDNRTGEG+GDDEQ++VD KVPA++ RI ITVTIYD E R Q Sbjct: 61 FIFYNNLQSPCGSVLHTGDNRTGEGEGDDEQLVVDLKKVPADVHRIAITVTIYDAEGRSQ 120 Query: 121 NFGQVSNAFVRVVDASSDREILRFDLGEDFSTETAVVFCEFYRHGADWKFQAVGSGFAGG 180 NFGQV NAFVR+ + + E+LRFDLGEDFS ETAVVFCE YRH WKF AVGSGF GG Sbjct: 121 NFGQVGNAFVRLANEETSEEVLRFDLGEDFSIETAVVFCELYRHNGQWKFNAVGSGFQGG 180 Query: 181 LSALCRNYGLDA 192 L AL R YGLDA Sbjct: 181 LGALVRAYGLDA 192 >ref|NP_976842.1| tellurium resistance protein [Bacillus cereus ATCC 10987] gb|AAS39450.1| tellurium resistance protein [Bacillus cereus ATCC 10987] Length = 192 Score = 275 bits (703), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 131/192 (68%), Positives = 148/192 (77%) Query: 1 VTISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGEDD 60 + I L KGQ+IDL KT+PGLTK V+GLGWD Y GG DFDLDASAFLL +GK E D Sbjct: 1 MAIQLQKGQKIDLGKTSPGLTKAVIGLGWDIKSYDGGADFDLDASAFLLDMNGKCTKETD 60 Query: 61 FVFYNNPSGGSGSVTHTGDNRTGEGDGDDEQILVDFSKVPANIQRIGITVTIYDYEARVQ 120 F+FYNN GSV HTGDNRTGEG+GDDEQ++VD KVPA++ +I ITVTIYD E R Q Sbjct: 61 FIFYNNLQSPCGSVLHTGDNRTGEGEGDDEQLVVDLKKVPADVHKIAITVTIYDAEGRSQ 120 Query: 121 NFGQVSNAFVRVVDASSDREILRFDLGEDFSTETAVVFCEFYRHGADWKFQAVGSGFAGG 180 NFGQV NAFVR+ + ++ E+LRFDLGEDFS ETAVVFCE YRH WKF AVGSGF GG Sbjct: 121 NFGQVGNAFVRLANEETNEEVLRFDLGEDFSIETAVVFCELYRHNGQWKFNAVGSGFQGG 180 Query: 181 LSALCRNYGLDA 192 L AL R YGLDA Sbjct: 181 LGALVRAYGLDA 192 >ref|NP_976841.1| tellurium resistance protein [Bacillus cereus ATCC 10987] gb|AAS39449.1| tellurium resistance protein [Bacillus cereus ATCC 10987] Length = 194 Score = 275 bits (702), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 127/192 (66%), Positives = 153/192 (79%) Query: 2 TISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGEDDF 61 +ISL KGQ++DLTKTNPGL+KV+VGLGWDTN+Y G DFDLD S FL+ +GK G +DF Sbjct: 3 SISLKKGQKVDLTKTNPGLSKVLVGLGWDTNRYDGQADFDLDVSIFLVGANGKVSGAEDF 62 Query: 62 VFYNNPSGGSGSVTHTGDNRTGEGDGDDEQILVDFSKVPANIQRIGITVTIYDYEARVQN 121 VFYNNP G +G+V H GDNRTGEG+GDDE I VD VPA+I+RI T+TIYD E R QN Sbjct: 63 VFYNNPKGANGAVEHLGDNRTGEGEGDDEAIKVDLKNVPAHIERICFTITIYDGEGRSQN 122 Query: 122 FGQVSNAFVRVVDASSDREILRFDLGEDFSTETAVVFCEFYRHGADWKFQAVGSGFAGGL 181 FGQVSN+FVR+VD + E++R+DLGEDFS ETAVV E YRH DWKF A+GSGF GGL Sbjct: 123 FGQVSNSFVRIVDEEKNAELIRYDLGEDFSIETAVVVGELYRHAGDWKFNAIGSGFQGGL 182 Query: 182 SALCRNYGLDAQ 193 ++LC N+GLD + Sbjct: 183 ASLCNNFGLDVE 194 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 316,494,101 Number of extensions: 14217824 Number of successful extensions: 32420 Number of sequences better than 1.0e-05: 139 Number of HSP's gapped: 32230 Number of HSP's successfully gapped: 143 Length of query: 193 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 74 Effective length of database: 434,140,797 Effective search space: 32126418978 Effective search space used: 32126418978 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 122 (51.6 bits)