BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0450.0010.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_653878.1| NADHdh_2, NAD(P)H dehydrogenase (quinone) [Baci... 266 2e-70 ref|NP_981831.1| conserved hypothetical protein [Bacillus cereus... 265 4e-70 ref|NP_835071.1| FMN-dependent NADH-azoreductase [Bacillus cereu... 261 8e-69 ref|NP_389804.1| similar to acyl-carrier protein phosphodiestera... 254 9e-67 ref|NP_244727.1| acyl-carrier protein phosphodiesterase [Bacillu... 253 2e-66 >ref|NP_653878.1| NADHdh_2, NAD(P)H dehydrogenase (quinone) [Bacillus anthracis A2012] ref|NP_847808.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP29294.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 208 Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 126/208 (60%), Positives = 151/208 (72%) Query: 1 MSKVLFVKANNRPADQAVSVQLYNTFLASYKETHPQDEITELDLFAEQLPYYDNTLITGI 60 M+KVLFVKANNRPA+QAVSV+LY FLASYKE HP D + ELDL+ E+LPY +I G Sbjct: 1 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGT 60 Query: 61 YKAAQGYXXXXXXXXXXXXVKKYVDQFLAADKIVFAFPLWNMTVPAVLHTYIDYLSQAGV 120 +KA +G+ KY++QFL ADK+VF FPLWN+T+PAVLHTYIDYL++AG Sbjct: 61 FKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGK 120 Query: 121 TFKYTAEGPVGLVTDKKAVILNARGGVYSEGPAASAEMAVNFVAGMLNFWGFKETTQVII 180 TFKYT EGPVGL+ DKK +LNARGGVYSEGPAA EMAV +VA M+ F+G V+I Sbjct: 121 TFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNMETVVI 180 Query: 181 EGHNQNPQQSAEIIAKGLELAKTAAASF 208 EGHNQ P ++ EII GLE A A F Sbjct: 181 EGHNQFPDKAEEIITAGLEEAAKVANKF 208 >ref|NP_981831.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS44439.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 208 Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 125/208 (60%), Positives = 152/208 (73%) Query: 1 MSKVLFVKANNRPADQAVSVQLYNTFLASYKETHPQDEITELDLFAEQLPYYDNTLITGI 60 M+ VLFVKANNRPA+QAVSV+LY FLA+YKE HP D + ELDL+ E+LPY +I G Sbjct: 1 MATVLFVKANNRPAEQAVSVKLYEAFLANYKEAHPNDTVVELDLYKEELPYVGVDMINGT 60 Query: 61 YKAAQGYXXXXXXXXXXXXVKKYVDQFLAADKIVFAFPLWNMTVPAVLHTYIDYLSQAGV 120 +KA +G+ KY++QFL ADK+VF FPLWN+T+PAVLHTYIDYL++AG Sbjct: 61 FKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGK 120 Query: 121 TFKYTAEGPVGLVTDKKAVILNARGGVYSEGPAASAEMAVNFVAGMLNFWGFKETTQVII 180 TFKYT EGPVGL+ DKK +LNARGGVYSEGPAA EMAV +VA M+ F+G V+I Sbjct: 121 TFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNMETVVI 180 Query: 181 EGHNQNPQQSAEIIAKGLELAKTAAASF 208 EGHNQ P ++ EIIA GLE A A+ F Sbjct: 181 EGHNQFPDKAEEIIAAGLEEAAKVASKF 208 >ref|NP_835071.1| FMN-dependent NADH-azoreductase [Bacillus cereus ATCC 14579] gb|AAP12272.1| FMN-dependent NADH-azoreductase [Bacillus cereus ATCC 14579] Length = 208 Score = 261 bits (667), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 123/208 (59%), Positives = 151/208 (72%) Query: 1 MSKVLFVKANNRPADQAVSVQLYNTFLASYKETHPQDEITELDLFAEQLPYYDNTLITGI 60 M+ VLFVKANNRPA+QAVSV+LY FLA+YKE +P D + ELDL+ E+LPY +I G Sbjct: 1 MATVLFVKANNRPAEQAVSVKLYEAFLANYKEANPNDTVVELDLYKEELPYVGVDMINGT 60 Query: 61 YKAAQGYXXXXXXXXXXXXVKKYVDQFLAADKIVFAFPLWNMTVPAVLHTYIDYLSQAGV 120 +K +G+ KY++QFL ADK+VF FPLWN+T+PAVLHTYIDYL++AG Sbjct: 61 FKVGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGK 120 Query: 121 TFKYTAEGPVGLVTDKKAVILNARGGVYSEGPAASAEMAVNFVAGMLNFWGFKETTQVII 180 TFKYT EGPVGL+ DKK +LNARGGVYSEGPAA EMAV +VA M+ F+G V+I Sbjct: 121 TFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNMETVVI 180 Query: 181 EGHNQNPQQSAEIIAKGLELAKTAAASF 208 EGHNQ P ++ EIIA GLE A A+ F Sbjct: 181 EGHNQFPDKAEEIIAAGLEEAAKVASKF 208 >ref|NP_389804.1| similar to acyl-carrier protein phosphodiesterase [Bacillus subtilis] sp|O35022|ACD1_BACSU Putative acyl carrier protein phosphodiesterase 1 (ACP phosphodiesterase 1) pir||G69901 acyl-carrier protein phosphodiesterase homolog yocJ - Bacillus subtilis gb|AAB84476.1| acyl carrier protein phosphodiesterase [Bacillus subtilis] emb|CAB13815.1| yocJ [Bacillus subtilis subsp. subtilis str. 168] Length = 208 Score = 254 bits (649), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 119/208 (57%), Positives = 149/208 (71%) Query: 1 MSKVLFVKANNRPADQAVSVQLYNTFLASYKETHPQDEITELDLFAEQLPYYDNTLITGI 60 MS VLFVK+++R A++ VS +LY FLA+YKE +P DE+ ELDL E LPY +I G Sbjct: 1 MSTVLFVKSSDRTAEEGVSTKLYEAFLAAYKENNPNDEVVELDLHKENLPYLGRDMINGT 60 Query: 61 YKAAQGYXXXXXXXXXXXXVKKYVDQFLAADKIVFAFPLWNMTVPAVLHTYIDYLSQAGV 120 +KA QG KY++QF+ ADK+VFAFPLWN TVPAVLHTY+DYLS+AGV Sbjct: 61 FKAGQGMEMTEDEKKQAAIADKYLNQFVKADKVVFAFPLWNFTVPAVLHTYVDYLSRAGV 120 Query: 121 TFKYTAEGPVGLVTDKKAVILNARGGVYSEGPAASAEMAVNFVAGMLNFWGFKETTQVII 180 TFKYT EGPVGL+ KK +LNARGGVYSEGP A+ EM++NF+ +L FWG ++ V+I Sbjct: 121 TFKYTQEGPVGLMGGKKVALLNARGGVYSEGPMAALEMSLNFMKTVLGFWGVQDLHTVVI 180 Query: 181 EGHNQNPQQSAEIIAKGLELAKTAAASF 208 EGHN P Q+ EI+ KGL+ AK AA F Sbjct: 181 EGHNAAPDQAQEIVEKGLQEAKDLAAKF 208 >ref|NP_244727.1| acyl-carrier protein phosphodiesterase [Bacillus halodurans] sp|Q9K672|ACD2_BACHD Putative acyl carrier protein phosphodiesterase 2 (ACP phosphodiesterase 2) pir||D84132 acyl-carrier protein phosphodiesterase BH3860 [imported] - Bacillus halodurans (strain C-125) dbj|BAB07579.1| acyl-carrier protein phosphodiesterase [Bacillus halodurans] Length = 208 Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 117/208 (56%), Positives = 151/208 (72%) Query: 1 MSKVLFVKANNRPADQAVSVQLYNTFLASYKETHPQDEITELDLFAEQLPYYDNTLITGI 60 MSKVLFVK N R D++VSV++Y TF+ +YKE +P DE+ ELD++ EQLPY D+T++ GI Sbjct: 1 MSKVLFVKGNPRSVDESVSVKMYQTFVDTYKEANPNDEVIELDIYNEQLPYLDSTMLAGI 60 Query: 61 YKAAQGYXXXXXXXXXXXXVKKYVDQFLAADKIVFAFPLWNMTVPAVLHTYIDYLSQAGV 120 +KA Q +Y+ QF+ ADK+VFAFPLWN T+PA LHTY+DYL++AGV Sbjct: 61 FKAGQQLELTAEEEEARKVADRYLTQFVEADKVVFAFPLWNFTIPAALHTYMDYLARAGV 120 Query: 121 TFKYTAEGPVGLVTDKKAVILNARGGVYSEGPAASAEMAVNFVAGMLNFWGFKETTQVII 180 TF YTAEGPVGL+ DKK +LNARGG YSEGPAA EM++N++ M+ F+G ++ V+I Sbjct: 121 TFNYTAEGPVGLMGDKKVALLNARGGYYSEGPAAQLEMSLNYMKTMVGFFGVQDPVTVVI 180 Query: 181 EGHNQNPQQSAEIIAKGLELAKTAAASF 208 EGHN P Q+ EII KGLE K A SF Sbjct: 181 EGHNAVPDQAEEIINKGLEEVKKVAQSF 208 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.132 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 264,431,092 Number of extensions: 9290760 Number of successful extensions: 19912 Number of sequences better than 1.0e-05: 122 Number of HSP's gapped: 19871 Number of HSP's successfully gapped: 122 Length of query: 208 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 88 Effective length of database: 431,425,698 Effective search space: 37965461424 Effective search space used: 37965461424 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 123 (52.0 bits)