BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0450.0005.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_658814.1| ABC_tran, ABC transporter [Bacillus anthracis A... 299 4e-80 ref|NP_981229.1| ABC transporter, ATP-binding protein [Bacillus ... 295 7e-79 ref|NP_834481.1| ABC transporter ATP-binding protein [Bacillus c... 295 8e-79 ref|NP_693238.1| sulfonate ABC transporter ATP-binding protein [... 275 9e-73 ref|NP_390939.1| similar to anion transport ABC transporter (ATP... 270 3e-71 >ref|NP_658814.1| ABC_tran, ABC transporter [Bacillus anthracis A2012] ref|NP_847229.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. Ames] gb|AAP28715.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. Ames] Length = 254 Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 143/254 (56%), Positives = 183/254 (72%) Query: 2 LPIVQLKEVTHAYLGDREASLAVENFSLYVEAGEFVSLVGPSGCGKTTLLSIIAGLLQPS 61 + +Q++ V+H + A L +EN SL VE GEF+S++GPSGCGKTTLLSIIAGLL P Sbjct: 1 MSFLQIRNVSHCFFAKENAKLILENMSLQVEEGEFISILGPSGCGKTTLLSIIAGLLDPI 60 Query: 62 RGEVFVSGHTVSGPSPEVGYMLQQDYLFPWRTILDNALLGLELTGRLNESSRQKTIGLLG 121 G VF+ G ++ + +GYMLQQDYLFPW+TI +N +LGL + +E +++ T+ LL Sbjct: 61 EGIVFLDGEPITTKTSSMGYMLQQDYLFPWKTIEENIMLGLHIRKIYDEQTKEHTLQLLK 120 Query: 122 EMGLAGKEHAYPAQLSGGMRQRVALVRTLSTDPGLLLLDEPFSALDYQIKLQLEDLVSET 181 ++GL E YP +LSGGMRQR ALVRTL+TDP +LLLDEPFSALDYQ KL+LEDLV Sbjct: 121 QVGLHDVEQQYPRELSGGMRQRAALVRTLATDPKILLLDEPFSALDYQTKLKLEDLVFSL 180 Query: 182 LRRRGTTAILVTHDLSEAIAVSSRVILLQPNPGKIRKIFTVPEAIRSTPPLYARDLPGFA 241 LR+ T++LVTHD+ EAIA+S R+ LLQ NPGKI K F VPE+IRS PL +R F Sbjct: 181 LRKYKKTSLLVTHDIEEAIAMSDRIYLLQANPGKIAKTFIVPESIRSLSPLESRHHHDFP 240 Query: 242 ELFHEVWKEMELAG 255 LF +WKE+E G Sbjct: 241 SLFQNIWKELERLG 254 >ref|NP_981229.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] gb|AAS43837.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] Length = 254 Score = 295 bits (755), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 141/254 (55%), Positives = 182/254 (71%) Query: 2 LPIVQLKEVTHAYLGDREASLAVENFSLYVEAGEFVSLVGPSGCGKTTLLSIIAGLLQPS 61 + +Q++ V+H + A L +E+ SL VE GEF+S++GPSGCGKTTLLSIIAGLL P Sbjct: 1 MSFLQIRNVSHCFFAKENAKLILEDMSLQVEEGEFISILGPSGCGKTTLLSIIAGLLDPI 60 Query: 62 RGEVFVSGHTVSGPSPEVGYMLQQDYLFPWRTILDNALLGLELTGRLNESSRQKTIGLLG 121 G VF+ G ++ + +GYMLQQDYLFPW+TI +N +LGL + +E +++ T+ LL Sbjct: 61 EGIVFLDGEPITTKTSSMGYMLQQDYLFPWKTIEENIMLGLHIRKIYDEQTKEHTLQLLK 120 Query: 122 EMGLAGKEHAYPAQLSGGMRQRVALVRTLSTDPGLLLLDEPFSALDYQIKLQLEDLVSET 181 ++GL E YP +LSGGMRQR ALVRTL+TDP +LLLDEPFSALDYQ KL+LEDLV Sbjct: 121 QVGLHDVEQQYPRELSGGMRQRAALVRTLATDPKILLLDEPFSALDYQTKLKLEDLVFSL 180 Query: 182 LRRRGTTAILVTHDLSEAIAVSSRVILLQPNPGKIRKIFTVPEAIRSTPPLYARDLPGFA 241 L + T++LVTHD+ EAIA+S R+ LLQ NPGKI K F VPE+IRS PL +R F Sbjct: 181 LHKYKKTSLLVTHDIEEAIAMSDRIYLLQANPGKIAKTFIVPESIRSLSPLESRHHHDFP 240 Query: 242 ELFHEVWKEMELAG 255 LF +WKE+E G Sbjct: 241 SLFQNIWKELERLG 254 >ref|NP_834481.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579] gb|AAP11682.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579] Length = 254 Score = 295 bits (754), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 142/254 (55%), Positives = 183/254 (72%) Query: 2 LPIVQLKEVTHAYLGDREASLAVENFSLYVEAGEFVSLVGPSGCGKTTLLSIIAGLLQPS 61 + +Q++ V+H + A L +E+ SL VE GEF+S++GPSGCGKTTLLSIIAGLL P Sbjct: 1 MSFLQIRNVSHCFFAKENAKLILEDMSLQVEEGEFISILGPSGCGKTTLLSIIAGLLDPI 60 Query: 62 RGEVFVSGHTVSGPSPEVGYMLQQDYLFPWRTILDNALLGLELTGRLNESSRQKTIGLLG 121 G VF+ G ++ + +GYMLQQDYLFPW+TI +N +LGL + +E ++ T+ LL Sbjct: 61 DGIVFLDGEPITTKTSSMGYMLQQDYLFPWKTIEENIMLGLHIRRIYDEQMKEHTLNLLK 120 Query: 122 EMGLAGKEHAYPAQLSGGMRQRVALVRTLSTDPGLLLLDEPFSALDYQIKLQLEDLVSET 181 ++GL G E YP +LSGGMRQR ALVRTL+TDP +LLLDEPFSALDYQ KL+LE+LV Sbjct: 121 QVGLHGVERQYPRELSGGMRQRAALVRTLATDPKILLLDEPFSALDYQTKLKLEELVFNL 180 Query: 182 LRRRGTTAILVTHDLSEAIAVSSRVILLQPNPGKIRKIFTVPEAIRSTPPLYARDLPGFA 241 L + T++LVTHD+ EAIA+S R+ LLQ NPGKI K F VPE+IRS PL AR F Sbjct: 181 LNKYKKTSLLVTHDIEEAIAMSDRIYLLQANPGKIAKTFIVPESIRSLSPLEARHHYDFP 240 Query: 242 ELFHEVWKEMELAG 255 LF ++WKE+E G Sbjct: 241 ALFQDIWKELERLG 254 >ref|NP_693238.1| sulfonate ABC transporter ATP-binding protein [Oceanobacillus iheyensis HTE831] dbj|BAC14273.1| sulfonate ABC transporter ATP-binding protein [Oceanobacillus iheyensis HTE831] Length = 265 Score = 275 bits (702), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 129/251 (51%), Positives = 175/251 (69%) Query: 2 LPIVQLKEVTHAYLGDREASLAVENFSLYVEAGEFVSLVGPSGCGKTTLLSIIAGLLQPS 61 + + L+ VTH Y A++N S ++ GEF+SL+GPSGCGK+TLLSIIAG++ + Sbjct: 1 MSFLTLEHVTHYYFSKDSYVKALDNISFTIKEGEFISLLGPSGCGKSTLLSIIAGIIHQT 60 Query: 62 RGEVFVSGHTVSGPSPEVGYMLQQDYLFPWRTILDNALLGLELTGRLNESSRQKTIGLLG 121 G+V + + + +GYMLQQDYLFPW+TI++N L+G ++ + E +Q I LL Sbjct: 61 EGQVCLQKEELINQNQAIGYMLQQDYLFPWKTIIENVLIGPKIHSNITEEIKQNAISLLN 120 Query: 122 EMGLAGKEHAYPAQLSGGMRQRVALVRTLSTDPGLLLLDEPFSALDYQIKLQLEDLVSET 181 E+GL E YP++LSGGMRQRVALVRTL DP +LLLDEPFSALDYQ KL+LEDLVS+ Sbjct: 121 EVGLKDVESKYPSELSGGMRQRVALVRTLINDPKILLLDEPFSALDYQTKLKLEDLVSKL 180 Query: 182 LRRRGTTAILVTHDLSEAIAVSSRVILLQPNPGKIRKIFTVPEAIRSTPPLYARDLPGFA 241 L+ TA+LVTHD+ EAIA+S R+ILL +PG + KI+ VP +R PL+ R P + Sbjct: 181 LKTYKKTAVLVTHDIGEAIAMSDRIILLNSHPGSVAKIYDVPLELRDEMPLHVRKHPKYQ 240 Query: 242 ELFHEVWKEME 252 LF +VW ++E Sbjct: 241 LLFDKVWDQLE 251 >ref|NP_390939.1| similar to anion transport ABC transporter (ATP-binding protein) [Bacillus subtilis] pir||C69995 anion transport ABC transporter (ATP-bindi) homolog ytlC - Bacillus subtilis gb|AAC00374.1| putative transporter [Bacillus subtilis] emb|CAB15039.1| ytlC [Bacillus subtilis subsp. subtilis str. 168] Length = 260 Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 128/250 (51%), Positives = 166/250 (66%) Query: 2 LPIVQLKEVTHAYLGDREASLAVENFSLYVEAGEFVSLVGPSGCGKTTLLSIIAGLLQPS 61 + + + VTH Y +E + AV + E G+F+S +GPSGCGKTTLLSIIAGL++PS Sbjct: 1 MSFLHVDHVTHTYFSIKEKTTAVRDIHFDAEKGDFISFLGPSGCGKTTLLSIIAGLIEPS 60 Query: 62 RGEVFVSGHTVSGPSPEVGYMLQQDYLFPWRTILDNALLGLELTGRLNESSRQKTIGLLG 121 G V + G + +GYMLQQDYLFPW++I +N LLGL++ L E S+ +GLL Sbjct: 61 EGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLGLKIADTLTEESKAAALGLLP 120 Query: 122 EMGLAGKEHAYPAQLSGGMRQRVALVRTLSTDPGLLLLDEPFSALDYQIKLQLEDLVSET 181 E GL E YP +LSGGMRQR AL RTL+ +P LLLLDEPFSALD+Q KL LE+LV T Sbjct: 121 EFGLIDVEKKYPKELSGGMRQRAALARTLAPNPSLLLLDEPFSALDFQTKLSLENLVFRT 180 Query: 182 LRRRGTTAILVTHDLSEAIAVSSRVILLQPNPGKIRKIFTVPEAIRSTPPLYARDLPGFA 241 L+ TA+LVTHD+ EAIA+S + L PG I +IFT+P+ + + P AR P F Sbjct: 181 LKEYQKTAVLVTHDIGEAIAMSDTIFLFSNQPGTIHQIFTIPKELAAMLPFDARQEPSFQ 240 Query: 242 ELFHEVWKEM 251 LF +WKE+ Sbjct: 241 TLFQTIWKEL 250 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.138 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 371,441,268 Number of extensions: 14398213 Number of successful extensions: 111240 Number of sequences better than 1.0e-05: 20622 Number of HSP's gapped: 90110 Number of HSP's successfully gapped: 22006 Length of query: 259 Length of database: 757,237,578 Length adjustment: 123 Effective length of query: 136 Effective length of database: 423,280,401 Effective search space: 57566134536 Effective search space used: 57566134536 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 124 (52.4 bits)